RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TRGC2P03986 189 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 SMIM13P0DJ93 91 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 MST1P26927 711 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 CRYBB3P26998 211 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 PMCHL1Q16048 86 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 Q6AWC8 147 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 THAP8Q8NA92 274 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 GATAD1Q8WUU5 269 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 WFDC12Q8WWY7 111 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 UBE2E2Q96LR5 201 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 LAMTOR3Q9UHA4 124 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 HMSDA8MTL9 139 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 LYNX1G3V0Z9 82 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.79□□□□□ -1.64
HERC4-206ENST00000427635 NDUFA3O95167 84 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 NBEAP1P0C6P0 100 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 LYNX1P0DP58 116 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 BCL2P10415 239 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 CFHR2P36980 270 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 CRYBB2P43320 205 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 FAM3BP58499 235 aaPredicted RBP4.79□□□□□ -1.64
HERC4-206ENST00000427635 PAX2Q02962 417 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 TRBV9A0A0B4J1U6 114 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 FABP5P3A8MUU1 101 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 K7EN84 100 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 C1QL1O75973 258 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 FSTP19883 344 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 FUT5Q11128 374 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 SPSB3Q6PJ21 355 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 PRSS57Q6UWY2 283 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 NRTNQ99748 197 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 MIXL1Q9H2W2 232 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 KLF2Q9Y5W3 355 aaPredicted RBP4.79□□□□□ -1.64
HERC4-206ENST00000427635 IGHV3OR16-8A0A075B7F1 116 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 H3BQ15 152 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 MSMBP08118 114 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 RFPL3SP0C7P2 107 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 SRIP30626 198 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 INSL4Q14641 139 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 TMEM91Q6ZNR0 172 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 CIARTQ8N365 385 aaPredicted RBP4.79□□□□□ -1.64
HERC4-206ENST00000427635 RASL10AQ92737 203 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 ZNF414Q96IQ9 312 aa4.79□□□□□ -1.64
HERC4-206ENST00000427635 A8MZ25 164 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 WISP1O95388 367 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 SPATA45Q537H7 98 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 C8orf82Q6P1X6 216 aaPredicted RBP4.78□□□□□ -1.64
HERC4-206ENST00000427635 SMIM8Q96KF7 97 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 MRPL18Q9H0U6 180 aaKnown RBP4.78□□□□□ -1.64
HERC4-206ENST00000427635 TTC3P53804 2025 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 TTC28Q96AY4 2481 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 CNOT1A5YKK6 2376 aaKnown RBP4.78□□□□□ -1.64
HERC4-206ENST00000427635 DEFB130BP0DP73 79 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 DEFB130AP0DP74 79 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 EGR4Q05215 589 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 GATD1Q8NB37 220 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 PARLQ9H300 379 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 Q9H3A6 140 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 IGKV1D-42A0A075B6H8 117 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 IFI6P09912 130 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 EDN2P20800 178 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 AWAT1Q58HT5 328 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 BRD3OSQ6XYD6 125 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 OR8D4Q8NGM9 314 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 NEUROG1Q92886 237 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 VWCEQ96DN2 955 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 MS4A6AQ9H2W1 248 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 TRAV12-3A0A0B4J271 114 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 NPSP0C0P6 89 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 GCHFRP30047 84 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 KIAA0040Q15053 153 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 C6orf226Q5I0X4 101 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 VAX1Q5SQQ9 334 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 RASL11AQ6T310 242 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 C1QL2Q7Z5L3 287 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 PLAC1Q9HBJ0 212 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 COL22A1Q8NFW1 1626 aaPredicted RBP4.78□□□□□ -1.64
HERC4-206ENST00000427635 MYO16Q9Y6X6 1858 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 IGHV1-18A0A0C4DH31 117 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 VWC2LB2RUY7 222 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 C1QTNF9P0C862 333 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 GAGE5Q13069 117 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 GAGE6Q13070 117 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 PMVKQ15126 192 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 ZNF79Q15937 498 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 TPTE2P1Q5T6R2 138 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 OR1P1Q8NH06 330 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 SPRR3Q9UBC9 169 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 ANKRD12Q6UB98 2062 aa4.78□□□□□ -1.64
HERC4-206ENST00000427635 BDP1A6H8Y1 2624 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 H0YL77 283 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 PAX4O43316 350 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 CA1P00915 261 aaPredicted RBP4.77□□□□□ -1.65
HERC4-206ENST00000427635 TAL2Q16559 108 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 MRPL55Q7Z7F7 128 aaKnown RBP4.77□□□□□ -1.65
HERC4-206ENST00000427635 LINC00527Q9UJ94 153 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 PAM16Q9Y3D7 125 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 KLF12Q9Y4X4 402 aa4.77□□□□□ -1.65
HERC4-206ENST00000427635 CHCHD2Q9Y6H1 151 aaPredicted RBP4.77□□□□□ -1.65
HERC4-206ENST00000427635 COL18A1P39060 1754 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms