RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 PAFAH1B2P68402 229 aa11.58□□□□□ -0.56
LIG1-202ENST00000427526 ZCCHC24Q8N2G6 241 aaKnown RBP11.58□□□□□ -0.56
LIG1-202ENST00000427526 SLC25A33Q9BSK2 321 aa11.58□□□□□ -0.56
LIG1-202ENST00000427526 TMEM106BQ9NUM4 274 aa11.58□□□□□ -0.56
LIG1-202ENST00000427526 SPTA1P02549 2419 aa11.58□□□□□ -0.56
LIG1-202ENST00000427526 YLPM1P49750 1951 aaKnown RBP11.58□□□□□ -0.56
LIG1-202ENST00000427526 KIR2DL5BA0A0G2JN68 375 aa11.58□□□□□ -0.56
LIG1-202ENST00000427526 KIR2DL5BA0A0G2JPC4 375 aa11.58□□□□□ -0.56
LIG1-202ENST00000427526 FCN1O00602 326 aa11.58□□□□□ -0.56
LIG1-202ENST00000427526 IER3P46695 156 aa11.58□□□□□ -0.56
LIG1-202ENST00000427526 KIR2DL5AQ8N109 375 aa11.58□□□□□ -0.56
LIG1-202ENST00000427526 GNB1LQ9BYB4 327 aa11.58□□□□□ -0.56
LIG1-202ENST00000427526 CBLN4Q9NTU7 201 aa11.58□□□□□ -0.56
LIG1-202ENST00000427526 M0QZK8 103 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 OR7C2O60412 319 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 FCN3O75636 299 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 IGLV2-8P01709 118 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 IRF2P14316 349 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 Q0VG73 95 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 Q6ZWC4 215 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 OR8I2Q8N0Y5 310 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 ST6GALNAC3Q8NDV1 305 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 CACNG8Q8WXS5 425 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 MRPL20Q9BYC9 149 aaKnown RBP11.57□□□□□ -0.56
LIG1-202ENST00000427526 TRBV9A0A0B4J1U6 114 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 A0A1W2PRE2 83 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 HSBP1L1C9JCN9 74 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 E7EUB6 86 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 INS-IGF2F8WCM5 200 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 SERF1AO75920 110 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 TAS2R45P59539 299 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 CCL8P80075 99 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 OR5AN1Q8NGI8 311 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 RNASE7Q9H1E1 156 aaKnown RBP11.57□□□□□ -0.56
LIG1-202ENST00000427526 OSTCQ9NRP0 149 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 SNURFLB1AK76 121 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 H0YJW9 148 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 C8orf88P0DMB2 117 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 CX3CL1P78423 397 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 MEF2CQ06413 473 aaPredicted RBP11.57□□□□□ -0.56
LIG1-202ENST00000427526 FAM167A-AS1Q96KT0 104 aa11.57□□□□□ -0.56
LIG1-202ENST00000427526 ISLRO14498 428 aa11.56□□□□□ -0.56
LIG1-202ENST00000427526 CD33P20138 364 aa11.56□□□□□ -0.56
LIG1-202ENST00000427526 TPPP2P59282 170 aa11.56□□□□□ -0.56
LIG1-202ENST00000427526 SUMO1P63165 101 aaKnown RBP11.56□□□□□ -0.56
LIG1-202ENST00000427526 RBPJQ06330 500 aa11.56□□□□□ -0.56
LIG1-202ENST00000427526 ADIPOQQ15848 244 aa11.56□□□□□ -0.56
LIG1-202ENST00000427526 IGF2BP2-AS1Q96M15 143 aa11.56□□□□□ -0.56
LIG1-202ENST00000427526 HARBI1Q96MB7 349 aa11.56□□□□□ -0.56
LIG1-202ENST00000427526 PPOXP50336 477 aa11.56□□□□□ -0.56
LIG1-202ENST00000427526 TMEM177Q53S58 311 aa11.56□□□□□ -0.56
LIG1-202ENST00000427526 MORN5Q5VZ52 161 aa11.56□□□□□ -0.56
LIG1-202ENST00000427526 KALRNO60229 2985 aa11.55□□□□□ -0.56
LIG1-202ENST00000427526 F2Z2F3 143 aa11.55□□□□□ -0.56
LIG1-202ENST00000427526 RANP62826 216 aaKnown RBP11.55□□□□□ -0.56
LIG1-202ENST00000427526 RPL8P62917 257 aaKnown RBP11.55□□□□□ -0.56
LIG1-202ENST00000427526 TIGITQ495A1 244 aa11.55□□□□□ -0.56
LIG1-202ENST00000427526 OR2T6Q8NHC8 308 aa11.55□□□□□ -0.56
LIG1-202ENST00000427526 SLC25A2Q9BXI2 301 aa11.55□□□□□ -0.56
LIG1-202ENST00000427526 MRPL32Q9BYC8 188 aaKnown RBP11.55□□□□□ -0.56
LIG1-202ENST00000427526 COMMD5Q9GZQ3 224 aa11.55□□□□□ -0.56
LIG1-202ENST00000427526 DLL1O00548 723 aa11.55□□□□□ -0.56
LIG1-202ENST00000427526 SIAH2O43255 324 aa11.55□□□□□ -0.56
LIG1-202ENST00000427526 CCL3L1P16619 93 aa11.55□□□□□ -0.56
LIG1-202ENST00000427526 CHRNB4P30926 498 aa11.55□□□□□ -0.56
LIG1-202ENST00000427526 TMEM200BQ69YZ2 307 aa11.55□□□□□ -0.56
LIG1-202ENST00000427526 TBX15Q96SF7 602 aa11.55□□□□□ -0.56
LIG1-202ENST00000427526 NKX6-3A6NJ46 265 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 CGB1A6NKQ9 187 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 APOA2P02652 100 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 TNFRSF1AP19438 455 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 TPTE2P1Q5T6R2 138 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 ZNF714Q96N38 554 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 GSX1Q9H4S2 264 aaPredicted RBP11.54□□□□□ -0.56
LIG1-202ENST00000427526 TRAV5A0A0B4J249 113 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 C17orf100A8MU93 164 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 ERHP84090 104 aaKnown RBP11.54□□□□□ -0.56
LIG1-202ENST00000427526 TMEM136Q6ZRR5 245 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 FLYWCH2Q96CP2 140 aaKnown RBP11.54□□□□□ -0.56
LIG1-202ENST00000427526 VKORC1Q9BQB6 163 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 DNAJC4Q9NNZ3 241 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 RELNP78509 3460 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 USF1P22415 310 aaPredicted RBP11.54□□□□□ -0.56
LIG1-202ENST00000427526 ATRXP46100 2492 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 UCNP55089 124 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 FXYD3Q14802 87 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 TMEM167AQ8TBQ9 72 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 LPAR2Q9HBW0 351 aa11.54□□□□□ -0.56
LIG1-202ENST00000427526 SMIM27A0A1W2PRY6 76 aa11.53□□□□□ -0.56
LIG1-202ENST00000427526 MT-ND6P03923 174 aa11.53□□□□□ -0.56
LIG1-202ENST00000427526 SSBP2P81877 361 aaPredicted RBP11.53□□□□□ -0.56
LIG1-202ENST00000427526 WT1-ASQ06250 92 aa11.53□□□□□ -0.56
LIG1-202ENST00000427526 TEX43Q6ZNM6 134 aa11.53□□□□□ -0.56
LIG1-202ENST00000427526 BAGE3Q86Y29 109 aa11.53□□□□□ -0.56
LIG1-202ENST00000427526 BAGE2Q86Y30 109 aa11.53□□□□□ -0.56
LIG1-202ENST00000427526 HSPB9Q9BQS6 159 aa11.53□□□□□ -0.56
LIG1-202ENST00000427526 POLEQ07864 2286 aa11.53□□□□□ -0.56
LIG1-202ENST00000427526 ZNF705FA8MVS1 300 aaPredicted RBP11.53□□□□□ -0.56
LIG1-202ENST00000427526 ZNF705DP0CH99 300 aaPredicted RBP11.53□□□□□ -0.56
LIG1-202ENST00000427526 ZNF705BP0CI00 300 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms