RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 TRAV14DV4A0A0A6YYC5 116 aa11.96□□□□□ -0.49
COL11A1-204ENST00000427239 K7EIM0 57 aa11.96□□□□□ -0.49
COL11A1-204ENST00000427239 OPRK1P41145 380 aa11.96□□□□□ -0.49
COL11A1-204ENST00000427239 KHDC1LQ5JSQ8 128 aa11.96□□□□□ -0.49
COL11A1-204ENST00000427239 OR10P1Q8NGE3 313 aa11.96□□□□□ -0.49
COL11A1-204ENST00000427239 EEF1AKMT3Q96AZ1 226 aa11.96□□□□□ -0.49
COL11A1-204ENST00000427239 MBD2Q9UBB5 411 aa11.96□□□□□ -0.49
COL11A1-204ENST00000427239 FAM24AA6NFZ4 105 aa11.95□□□□□ -0.5
COL11A1-204ENST00000427239 METTL15P1P0C7V9 234 aa11.95□□□□□ -0.5
COL11A1-204ENST00000427239 SLC25A4P12235 298 aa11.95□□□□□ -0.5
COL11A1-204ENST00000427239 ZNF343Q6P1L6 599 aa11.95□□□□□ -0.5
COL11A1-204ENST00000427239 SHISA2Q6UWI4 295 aa11.95□□□□□ -0.5
COL11A1-204ENST00000427239 NDUFA11Q86Y39 141 aa11.95□□□□□ -0.5
COL11A1-204ENST00000427239 STX12Q86Y82 276 aa11.95□□□□□ -0.5
COL11A1-204ENST00000427239 TMEM252Q8N6L7 170 aa11.95□□□□□ -0.5
COL11A1-204ENST00000427239 MDFIQ99750 246 aa11.95□□□□□ -0.5
COL11A1-204ENST00000427239 TXN2Q99757 166 aa11.95□□□□□ -0.5
COL11A1-204ENST00000427239 STAB1Q9NY15 2570 aa11.95□□□□□ -0.5
COL11A1-204ENST00000427239 SULT1A1P50225 295 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 RUNX1Q01196 453 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 CD69Q07108 199 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 C4orf3Q8WVX3 66 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 DCUN1D4Q92564 292 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 FNDC4Q9H6D8 234 aaPredicted RBP11.94□□□□□ -0.5
COL11A1-204ENST00000427239 GAR1Q9NY12 217 aaKnown RBP11.94□□□□□ -0.5
COL11A1-204ENST00000427239 C21orf62Q9NYP8 219 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 MFSD2BA6NFX1 497 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 PMS2P5A8MQ11 134 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 PRSS46E5RG02 174 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 FCGR2BP31994 310 aaPredicted RBP11.94□□□□□ -0.5
COL11A1-204ENST00000427239 MFAP4P55083 255 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 DEFA5Q01523 94 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 OR8G2PQ6IF36 304 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 ZNF546Q86UE3 836 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 SLC51BQ86UW2 128 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 ZNF502Q8TBZ5 544 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 HYLS1Q96M11 299 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 GGACTQ9BVM4 153 aa11.94□□□□□ -0.5
COL11A1-204ENST00000427239 I3L521 148 aa11.93□□□□□ -0.5
COL11A1-204ENST00000427239 IGHV3-11P01762 117 aa11.93□□□□□ -0.5
COL11A1-204ENST00000427239 LGALS1P09382 135 aaKnown RBP11.93□□□□□ -0.5
COL11A1-204ENST00000427239 RPL12P30050 165 aaKnown RBP11.93□□□□□ -0.5
COL11A1-204ENST00000427239 S100A11P31949 105 aa11.93□□□□□ -0.5
COL11A1-204ENST00000427239 NUP62P37198 522 aaPredicted RBP11.93□□□□□ -0.5
COL11A1-204ENST00000427239 NPBWR1P48145 328 aa11.93□□□□□ -0.5
COL11A1-204ENST00000427239 HBG1P69891 147 aa11.93□□□□□ -0.5
COL11A1-204ENST00000427239 HBG2P69892 147 aa11.93□□□□□ -0.5
COL11A1-204ENST00000427239 BAXQ07812 192 aa11.93□□□□□ -0.5
COL11A1-204ENST00000427239 MLANAQ16655 118 aa11.93□□□□□ -0.5
COL11A1-204ENST00000427239 TMEM116Q8NCL8 245 aa11.93□□□□□ -0.5
COL11A1-204ENST00000427239 KLHL30-AS1Q8NEE0 82 aa11.93□□□□□ -0.5
COL11A1-204ENST00000427239 GNB4Q9HAV0 340 aa11.93□□□□□ -0.5
COL11A1-204ENST00000427239 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.92□□□□□ -0.5
COL11A1-204ENST00000427239 IGHV3-21A0A0B4J1V1 117 aa11.92□□□□□ -0.5
COL11A1-204ENST00000427239 IGSF23A1L1A6 192 aa11.92□□□□□ -0.5
COL11A1-204ENST00000427239 LINC00862A6NCI5 91 aa11.92□□□□□ -0.5
COL11A1-204ENST00000427239 NUDT19A8MXV4 375 aa11.92□□□□□ -0.5
COL11A1-204ENST00000427239 G3V3Q6 166 aa11.92□□□□□ -0.5
COL11A1-204ENST00000427239 CST7O76096 145 aa11.92□□□□□ -0.5
COL11A1-204ENST00000427239 CLEC3BP05452 202 aa11.92□□□□□ -0.5
COL11A1-204ENST00000427239 ACSM6Q6P461 480 aa11.92□□□□□ -0.5
COL11A1-204ENST00000427239 INO80EQ8NBZ0 244 aaPredicted RBP11.92□□□□□ -0.5
COL11A1-204ENST00000427239 OR4X1Q8NH49 305 aa11.92□□□□□ -0.5
COL11A1-204ENST00000427239 PEF1Q9UBV8 284 aaKnown RBP11.92□□□□□ -0.5
COL11A1-204ENST00000427239 FNDC10F2Z333 226 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 IGHV3-48P01763 117 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 EWSR1Q01844 656 aaKnown RBP eCLIP11.91□□□□□ -0.5
COL11A1-204ENST00000427239 GAMTQ14353 236 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 SLC16A13Q7RTY0 426 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 BSCL2Q96G97 398 aaPredicted RBP11.91□□□□□ -0.5
COL11A1-204ENST00000427239 CCDC140Q96MF4 163 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 OR5B12Q96R08 314 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 S4R3C0 116 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 FXYD6-FXYD2A0A087WZ82 144 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 A0A1W2PRX2 142 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 ADARB2-AS1A8MUL3 147 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 SCGB2A1O75556 95 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 HSPB1P04792 205 aaKnown RBP11.91□□□□□ -0.5
COL11A1-204ENST00000427239 DLK1P80370 383 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 NHLH2Q02577 135 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 ATP6V1FQ16864 119 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 NSUN5P1Q3KNT7 163 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 Q56UQ5 140 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 TOR2AQ5JU69 321 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 SPSB3Q6PJ21 355 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 CLEC19AQ6UXS0 136 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 TMEM217Q8N7C4 229 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 LRRC20Q8TCA0 184 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 SLC35E1Q96K37 410 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 HSPB11Q9Y547 144 aa11.91□□□□□ -0.5
COL11A1-204ENST00000427239 TRAV30A0A087WSZ9 112 aa11.9□□□□□ -0.5
COL11A1-204ENST00000427239 GNG7O60262 68 aa11.9□□□□□ -0.5
COL11A1-204ENST00000427239 CLN5O75503 358 aa11.9□□□□□ -0.5
COL11A1-204ENST00000427239 IGHV3-23P01764 117 aa11.9□□□□□ -0.5
COL11A1-204ENST00000427239 SLC38A11Q08AI6 406 aa11.9□□□□□ -0.5
COL11A1-204ENST00000427239 ARL16Q0P5N6 197 aa11.9□□□□□ -0.5
COL11A1-204ENST00000427239 HIST2H2BDQ6DRA6 164 aa11.9□□□□□ -0.5
COL11A1-204ENST00000427239 HAPLN4Q86UW8 402 aa11.9□□□□□ -0.5
COL11A1-204ENST00000427239 UBAC2Q8NBM4 344 aa11.9□□□□□ -0.5
COL11A1-204ENST00000427239 NPIPB3Q92617 1050 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms