RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 CMTM2Q8TAZ6 248 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 LGALS14Q8TCE9 139 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 SMIM4Q8WVI0 70 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 PATE1Q8WXA2 126 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ASB13Q8WXK3 278 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 TMEM203Q969S6 136 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ZMYND19Q96E35 227 aaPredicted RBP1.19□□□□□ -2.22
PTPRC-208ENST00000427110 FMC1Q96HJ9 113 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 Q96M85 177 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ERMAPQ96PL5 475 aaPredicted RBP1.19□□□□□ -2.22
PTPRC-208ENST00000427110 NDEL1Q9GZM8 345 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 SLC25A31Q9H0C2 315 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ALX4Q9H161 411 aaPredicted RBP1.19□□□□□ -2.22
PTPRC-208ENST00000427110 OR51V1Q9H2C8 321 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 TCEAL2Q9H3H9 227 aaPredicted RBP1.19□□□□□ -2.22
PTPRC-208ENST00000427110 TXNIPQ9H3M7 391 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 DIABLOQ9NR28 239 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 PRTFDC1Q9NRG1 225 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF586Q9NXT0 402 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 COMMD3Q9UBI1 195 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 C14orf166Q9Y224 244 aaKnown RBP1.19□□□□□ -2.22
PTPRC-208ENST00000427110 IER3IP1Q9Y5U9 82 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 NUBP2Q9Y5Y2 271 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 ALG5Q9Y673 324 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 TNRC6AQ8NDV7 1962 aaKnown RBP1.19□□□□□ -2.22
PTPRC-208ENST00000427110 RTTNQ86VV8 2226 aa1.19□□□□□ -2.22
PTPRC-208ENST00000427110 RANBP2P49792 3224 aaKnown RBP1.19□□□□□ -2.22
PTPRC-208ENST00000427110 UNC80Q8N2C7 3258 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 KMT2EQ8IZD2 1858 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 ESPL1Q14674 2120 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 TRIOO75962 3097 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 TRAV36DV7A0A075B6V5 113 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 MEIKINA0A087WXM9 373 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 IGLV3-32A0A0A0MS00 114 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 TMED7-TICAM2A0A0A6YYA0 188 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 A0A0A6YYH2 397 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 LOC102725191A0A1B0GVB3 256 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 A0A1W2PRG6 482 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 A6NJ64 397 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 TMEM212A6NML5 194 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF729A6NN14 1252 aaPredicted RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 HMSDA8MTL9 139 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 SNRPGP15A8MWD9 76 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 FTCDNL1E5RQL4 147 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 G3V3Q6 166 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 H3BQ85 93 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 C15orf65H3BRN8 121 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 K7EPK0 472 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 PLPP3O14495 311 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 ISLRO14498 428 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 GPR171O14626 319 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 FABP7O15540 132 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 EEF1E1O43324 174 aaKnown RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 SYNGR2O43760 224 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 OR2T1O43869 369 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 OR2B3O76000 313 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 NDUFB6O95139 128 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 CD8AP01732 235 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 ISG15P05161 165 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 GYPBP06028 91 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 S100A9P06702 114 aaKnown RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 PSKH1P11801 424 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 PTHLHP12272 177 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 GTF2F2P13984 249 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 GABRA1P14867 456 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 CXCL3P19876 107 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 ALOX5APP20292 161 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 M6PRP20645 277 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 FKBP2P26885 142 aaKnown RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 CRABP1P29762 137 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 HOXA6P31267 233 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 EVI2BP34910 448 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 RCVRNP35243 200 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 FAUP35544 74 aaKnown RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 INPP1P49441 399 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 SRP9P49458 86 aaKnown RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF83P51522 516 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 POLR2HP52434 150 aaKnown RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 NKX2-5P52952 324 aaPredicted RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 OR10A3P58181 314 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 GNG2P59768 71 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 AP3S2P59780 193 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 MRPS15P82914 257 aaKnown RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF117Q03924 483 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 RPL18Q07020 188 aaKnown RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 EIF3IQ13347 325 aaKnown RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 INSL4Q14641 139 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 EBPQ15125 230 aaKnown RBP1.18□□□□□ -2.22
PTPRC-208ENST00000427110 VAMP3Q15836 100 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 TNXAQ16473 311 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 CEACAM16Q2WEN9 425 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 DEFB110Q30KQ9 67 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 Q499Y3 187 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 MESTQ5EB52 335 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 TMEM31Q5JXX7 168 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 TMEM244Q5VVB8 128 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 TEX261Q6UWH6 196 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 LRRN1Q6UXK5 716 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 SLC36A1Q7Z2H8 476 aa1.18□□□□□ -2.22
PTPRC-208ENST00000427110 GRINAQ7Z429 371 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms