RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 FAM209BQ5JX69 171 aa9.58□□□□□ -0.88
GPC1-204ENST00000426280 LINC00322Q6ZN03 302 aaPredicted RBP9.58□□□□□ -0.88
GPC1-204ENST00000426280 C12orf45Q8N5I9 185 aaPredicted RBP9.58□□□□□ -0.88
GPC1-204ENST00000426280 OR52E5Q8NH55 327 aa9.58□□□□□ -0.88
GPC1-204ENST00000426280 VN1R17PQ8TDU5 208 aa9.58□□□□□ -0.88
GPC1-204ENST00000426280 OR10C1Q96KK4 312 aa9.58□□□□□ -0.88
GPC1-204ENST00000426280 CXorf58Q96LI9 332 aa9.58□□□□□ -0.88
GPC1-204ENST00000426280 MARVELD1Q9BSK0 173 aa9.58□□□□□ -0.88
GPC1-204ENST00000426280 ZNF436Q9C0F3 470 aaPredicted RBP9.58□□□□□ -0.88
GPC1-204ENST00000426280 RBKSQ9H477 322 aa9.58□□□□□ -0.88
GPC1-204ENST00000426280 ENY2Q9NPA8 101 aa9.58□□□□□ -0.88
GPC1-204ENST00000426280 C8orf88P0DMB2 117 aa9.57□□□□□ -0.88
GPC1-204ENST00000426280 HAGHQ16775 308 aa9.57□□□□□ -0.88
GPC1-204ENST00000426280 LCN12Q6JVE5 192 aa9.57□□□□□ -0.88
GPC1-204ENST00000426280 TMEM61Q8N0U2 210 aa9.57□□□□□ -0.88
GPC1-204ENST00000426280 DEFB125Q8N687 156 aa9.57□□□□□ -0.88
GPC1-204ENST00000426280 OR1P1Q8NH06 330 aa9.57□□□□□ -0.88
GPC1-204ENST00000426280 MISP3Q96FF7 219 aa9.57□□□□□ -0.88
GPC1-204ENST00000426280 RCHY1Q96PM5 261 aa9.57□□□□□ -0.88
GPC1-204ENST00000426280 TM2D3Q9BRN9 247 aa9.57□□□□□ -0.88
GPC1-204ENST00000426280 MAGT1Q9H0U3 335 aa9.57□□□□□ -0.88
GPC1-204ENST00000426280 HEYLQ9NQ87 328 aaPredicted RBP9.57□□□□□ -0.88
GPC1-204ENST00000426280 HSPB7Q9UBY9 170 aa9.57□□□□□ -0.88
GPC1-204ENST00000426280 PIGBOS1A0A0B4J2F0 54 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 RBMY1BA6NDE4 496 aaKnown RBP9.56□□□□□ -0.88
GPC1-204ENST00000426280 RBMY1EA6NEQ0 496 aaKnown RBP9.56□□□□□ -0.88
GPC1-204ENST00000426280 A8MWP6 167 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 INS-IGF2F8WCM5 200 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 ZNF207O43670 478 aaKnown RBP9.56□□□□□ -0.88
GPC1-204ENST00000426280 IFNA21P01568 189 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 CTSGP08311 255 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 RBMY1DP0C7P1 496 aaKnown RBP9.56□□□□□ -0.88
GPC1-204ENST00000426280 IAPPP10997 89 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 SLC25A6P12236 298 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 SNCAP37840 140 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 CD81P60033 236 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 GUCA2BQ16661 112 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 FAM106AQ4KMX7 169 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 BTNL8Q6UX41 500 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 ZNF114Q8NC26 417 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 DYNLRB2Q8TF09 96 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 TMEM170AQ8WVE7 144 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 PINX1Q96BK5 328 aaKnown RBP9.56□□□□□ -0.88
GPC1-204ENST00000426280 NEURL2Q9BR09 285 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 C21orf62Q9NYP8 219 aa9.56□□□□□ -0.88
GPC1-204ENST00000426280 MRPL36Q9P0J6 103 aaKnown RBP9.56□□□□□ -0.88
GPC1-204ENST00000426280 FAM25EA8MYX2 175 aa9.55□□□□□ -0.88
GPC1-204ENST00000426280 SCAF4O95104 1147 aaKnown RBP9.55□□□□□ -0.88
GPC1-204ENST00000426280 PTTG1O95997 202 aa9.55□□□□□ -0.88
GPC1-204ENST00000426280 MT-CO2P00403 227 aa9.55□□□□□ -0.88
GPC1-204ENST00000426280 IAH1Q2TAA2 248 aaPredicted RBP9.55□□□□□ -0.88
GPC1-204ENST00000426280 BSXQ3C1V8 233 aa9.55□□□□□ -0.88
GPC1-204ENST00000426280 ZBTB8BQ8NAP8 495 aaPredicted RBP9.55□□□□□ -0.88
GPC1-204ENST00000426280 UBAC2Q8NBM4 344 aa9.55□□□□□ -0.88
GPC1-204ENST00000426280 OR4D5Q8NGN0 318 aa9.55□□□□□ -0.88
GPC1-204ENST00000426280 OR2K2Q8NGT1 345 aa9.55□□□□□ -0.88
GPC1-204ENST00000426280 DTD1Q8TEA8 209 aa9.55□□□□□ -0.88
GPC1-204ENST00000426280 CITED4Q96RK1 184 aa9.55□□□□□ -0.88
GPC1-204ENST00000426280 RETNQ9HD89 108 aa9.55□□□□□ -0.88
GPC1-204ENST00000426280 PALMDQ9NP74 551 aa9.55□□□□□ -0.88
GPC1-204ENST00000426280 THYN1Q9P016 225 aa9.55□□□□□ -0.88
GPC1-204ENST00000426280 WRBO00258 174 aa9.54□□□□□ -0.88
GPC1-204ENST00000426280 CYB5BO43169 146 aa9.54□□□□□ -0.88
GPC1-204ENST00000426280 PRAF2O60831 178 aa9.54□□□□□ -0.88
GPC1-204ENST00000426280 SCGB1D2O95969 90 aa9.54□□□□□ -0.88
GPC1-204ENST00000426280 POLR2GP62487 172 aaKnown RBP eCLIP9.54□□□□□ -0.88
GPC1-204ENST00000426280 PVRIGQ6DKI7 326 aa9.54□□□□□ -0.88
GPC1-204ENST00000426280 SLC24A4Q8NFF2 622 aa9.54□□□□□ -0.88
GPC1-204ENST00000426280 OR1L6Q8NGR2 347 aa9.54□□□□□ -0.88
GPC1-204ENST00000426280 TMEM190Q8WZ59 177 aa9.54□□□□□ -0.88
GPC1-204ENST00000426280 HIPK2Q9H2X6 1198 aa9.54□□□□□ -0.88
GPC1-204ENST00000426280 GPN1Q9HCN4 374 aaPredicted RBP9.54□□□□□ -0.88
GPC1-204ENST00000426280 GSKIPQ9P0R6 139 aa9.54□□□□□ -0.88
GPC1-204ENST00000426280 KMT2CQ8NEZ4 4911 aaKnown RBP9.53□□□□□ -0.88
GPC1-204ENST00000426280 IGHV3-49A0A0A0MS15 119 aa9.53□□□□□ -0.88
GPC1-204ENST00000426280 C5orf51A6NDU8 294 aa9.53□□□□□ -0.88
GPC1-204ENST00000426280 SNRPGP15A8MWD9 76 aa9.53□□□□□ -0.88
GPC1-204ENST00000426280 FAM90A26D6RGX4 464 aa9.53□□□□□ -0.88
GPC1-204ENST00000426280 SYNGR2O43760 224 aa9.53□□□□□ -0.88
GPC1-204ENST00000426280 SIX6O95475 246 aa9.53□□□□□ -0.88
GPC1-204ENST00000426280 NPY1RP25929 384 aa9.53□□□□□ -0.88
GPC1-204ENST00000426280 HTR2BP41595 481 aa9.53□□□□□ -0.88
GPC1-204ENST00000426280 NKX2-1P43699 371 aaPredicted RBP9.53□□□□□ -0.88
GPC1-204ENST00000426280 ID3Q02535 119 aa9.53□□□□□ -0.88
GPC1-204ENST00000426280 Q56UQ5 140 aa9.53□□□□□ -0.88
GPC1-204ENST00000426280 FNDC4Q9H6D8 234 aaPredicted RBP9.53□□□□□ -0.88
GPC1-204ENST00000426280 TECRQ9NZ01 308 aaKnown RBP9.53□□□□□ -0.88
GPC1-204ENST00000426280 MRPL27Q9P0M9 148 aaKnown RBP9.53□□□□□ -0.88
GPC1-204ENST00000426280 TENM3Q9P273 2699 aa9.53□□□□□ -0.88
GPC1-204ENST00000426280 OR11H12B2RN74 326 aa9.52□□□□□ -0.89
GPC1-204ENST00000426280 H3BP45 60 aa9.52□□□□□ -0.89
GPC1-204ENST00000426280 GOSR2O14653 212 aa9.52□□□□□ -0.89
GPC1-204ENST00000426280 MED6O75586 246 aa9.52□□□□□ -0.89
GPC1-204ENST00000426280 IFNA10P01566 189 aa9.52□□□□□ -0.89
GPC1-204ENST00000426280 SUB1P53999 127 aaKnown RBP eCLIP9.52□□□□□ -0.89
GPC1-204ENST00000426280 C2orf83Q53S99 150 aa9.52□□□□□ -0.89
GPC1-204ENST00000426280 GTSCR1Q86UQ5 136 aa9.52□□□□□ -0.89
GPC1-204ENST00000426280 LILRB2Q8N423 598 aa9.52□□□□□ -0.89
GPC1-204ENST00000426280 BSCL2Q96G97 398 aaPredicted RBP9.52□□□□□ -0.89
GPC1-204ENST00000426280 C20orf24Q9BUV8 137 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms