RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 ZDHHC16Q969W1 377 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 TMEM191AQ9H0A3 160 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 ISLRO14498 428 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 WNT9BO14905 357 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 FOXA3P55318 350 aaPredicted RBP13.22□□□□□ -0.29
PKP4-205ENST00000426248 TRAT1Q6PIZ9 186 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 ITLN1Q8WWA0 313 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 VKORC1Q9BQB6 163 aa13.22□□□□□ -0.29
PKP4-205ENST00000426248 FRYQ5TBA9 3013 aa13.21□□□□□ -0.29
PKP4-205ENST00000426248 Q0VG73 95 aa13.21□□□□□ -0.29
PKP4-205ENST00000426248 SEM1Q6ZVN7 128 aa13.21□□□□□ -0.29
PKP4-205ENST00000426248 LINC00869P0C866 280 aa13.21□□□□□ -0.29
PKP4-205ENST00000426248 MORN2Q502X0 79 aa13.21□□□□□ -0.29
PKP4-205ENST00000426248 ASPHD1Q5U4P2 390 aa13.21□□□□□ -0.29
PKP4-205ENST00000426248 H2BFWTQ7Z2G1 175 aa13.21□□□□□ -0.29
PKP4-205ENST00000426248 OR10W1Q8NGF6 305 aa13.21□□□□□ -0.29
PKP4-205ENST00000426248 TMEM70Q9BUB7 260 aa13.21□□□□□ -0.29
PKP4-205ENST00000426248 C11orf1Q9H5F2 150 aa13.21□□□□□ -0.29
PKP4-205ENST00000426248 OR2W1Q9Y3N9 320 aa13.21□□□□□ -0.29
PKP4-205ENST00000426248 DYSFO75923 2080 aa13.21□□□□□ -0.29
PKP4-205ENST00000426248 OR10J4P0C629 311 aa13.21□□□□□ -0.3
PKP4-205ENST00000426248 GATA2P23769 480 aaPredicted RBP13.21□□□□□ -0.3
PKP4-205ENST00000426248 LHFPL4Q7Z7J7 247 aa13.21□□□□□ -0.3
PKP4-205ENST00000426248 MUC15Q8N387 334 aa13.21□□□□□ -0.3
PKP4-205ENST00000426248 SSBP4Q9BWG4 385 aaPredicted RBP13.21□□□□□ -0.3
PKP4-205ENST00000426248 OR2D2Q9H210 308 aa13.21□□□□□ -0.3
PKP4-205ENST00000426248 SLC25A15Q9Y619 301 aa13.21□□□□□ -0.3
PKP4-205ENST00000426248 A0A1W2PRD5 423 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 A0A1W2PRF3 423 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 A0A1W2PRM7 423 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 HELTA6NFD8 242 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 FOXI3A8MTJ6 420 aaPredicted RBP13.2□□□□□ -0.3
PKP4-205ENST00000426248 RPL8P62917 257 aaKnown RBP13.2□□□□□ -0.3
PKP4-205ENST00000426248 Q8IYB0 196 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 FAM231BA6NCW3 169 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 FAM181BA6NEQ2 426 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 HLA-DQA1P01909 254 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 FGFRL1Q8N441 504 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 C5orf17Q8NAS9 161 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 OR4P4Q8NGL7 312 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 HIST1H1EP10412 219 aaKnown RBP13.2□□□□□ -0.3
PKP4-205ENST00000426248 MIC13Q5XKP0 118 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 OR1L1Q8NH94 360 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 TNFRSF1AP19438 455 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 SSTR5P35346 364 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 GLRXP35754 106 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 FGF12P61328 243 aa13.2□□□□□ -0.3
PKP4-205ENST00000426248 PCSK5Q92824 1860 aa13.19□□□□□ -0.3
PKP4-205ENST00000426248 SH2D7A6NKC9 451 aaPredicted RBP13.19□□□□□ -0.3
PKP4-205ENST00000426248 AESQ08117 197 aa13.19□□□□□ -0.3
PKP4-205ENST00000426248 TM4SF20Q53R12 229 aa13.19□□□□□ -0.3
PKP4-205ENST00000426248 FAM201AQ5SY85 155 aa13.19□□□□□ -0.3
PKP4-205ENST00000426248 BVES-AS1Q5T3Y7 98 aa13.19□□□□□ -0.3
PKP4-205ENST00000426248 SAP30LQ9HAJ7 183 aa13.19□□□□□ -0.3
PKP4-205ENST00000426248 AZU1P20160 251 aa13.19□□□□□ -0.3
PKP4-205ENST00000426248 CRYBB3P26998 211 aa13.19□□□□□ -0.3
PKP4-205ENST00000426248 OR4S2Q8NH73 311 aa13.19□□□□□ -0.3
PKP4-205ENST00000426248 MLNRO43193 412 aa13.19□□□□□ -0.3
PKP4-205ENST00000426248 TFF1P04155 84 aa13.19□□□□□ -0.3
PKP4-205ENST00000426248 AMY1AP04745 511 aa13.19□□□□□ -0.3
PKP4-205ENST00000426248 CENPWQ5EE01 88 aa13.19□□□□□ -0.3
PKP4-205ENST00000426248 SIGMAR1Q99720 223 aa13.19□□□□□ -0.3
PKP4-205ENST00000426248 PRB4P10163 310 aaPredicted RBP13.18□□□□□ -0.3
PKP4-205ENST00000426248 ERVK-16P61578 105 aa13.18□□□□□ -0.3
PKP4-205ENST00000426248 ZNF788Q6ZQV5 615 aa13.18□□□□□ -0.3
PKP4-205ENST00000426248 DMXL2Q8TDJ6 3036 aa13.18□□□□□ -0.3
PKP4-205ENST00000426248 CLDN14O95500 239 aa13.18□□□□□ -0.3
PKP4-205ENST00000426248 NBEAP1P0C6P0 100 aa13.18□□□□□ -0.3
PKP4-205ENST00000426248 LGALS4P56470 323 aa13.18□□□□□ -0.3
PKP4-205ENST00000426248 OR10J3Q5JRS4 329 aa13.18□□□□□ -0.3
PKP4-205ENST00000426248 FAM71F2Q6NXP2 309 aa13.18□□□□□ -0.3
PKP4-205ENST00000426248 CENPVQ7Z7K6 275 aaPredicted RBP13.18□□□□□ -0.3
PKP4-205ENST00000426248 GNB1LQ9BYB4 327 aa13.18□□□□□ -0.3
PKP4-205ENST00000426248 TRBV20OR9-2A0A075B6H5 130 aa13.18□□□□□ -0.3
PKP4-205ENST00000426248 LEPROTL1O95214 131 aa13.18□□□□□ -0.3
PKP4-205ENST00000426248 YLPM1P49750 1951 aaKnown RBP13.18□□□□□ -0.3
PKP4-205ENST00000426248 KIAA1549Q9HCM3 1950 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 IBA57Q5T440 356 aaKnown RBP13.17□□□□□ -0.3
PKP4-205ENST00000426248 COLCA1Q6ZS62 124 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 PERPQ96FX8 193 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 SPCS1Q9Y6A9 102 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 LOC400499M0QZD8 3231 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 TRBV9A0A0B4J1U6 114 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 C22orf46C9J442 243 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 J3QR89 54 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 IGKV3-15P01624 115 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 GPR183P32249 361 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 CKS1BP61024 79 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 SPSB4Q96A44 273 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.17□□□□□ -0.3
PKP4-205ENST00000426248 HOXA4Q00056 320 aaPredicted RBP13.17□□□□□ -0.3
PKP4-205ENST00000426248 PSG5Q15238 335 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 IL36GQ9NZH8 169 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 TIMM9Q9Y5J7 89 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 PTPRBP23467 1997 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 HIVEP3Q5T1R4 2406 aa13.17□□□□□ -0.3
PKP4-205ENST00000426248 CD1BP29016 333 aa13.16□□□□□ -0.3
PKP4-205ENST00000426248 RAB9AP51151 201 aa13.16□□□□□ -0.3
PKP4-205ENST00000426248 OR2K2Q8NGT1 345 aa13.16□□□□□ -0.3
PKP4-205ENST00000426248 TMPRSS2O15393 492 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms