RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 TMEM101Q96IK0 257 aa6.56□□□□□ -1.36
CTNND1-207ENST00000426142 KCNS1Q96KK3 526 aa6.56□□□□□ -1.36
CTNND1-207ENST00000426142 RNF126Q9BV68 326 aa6.56□□□□□ -1.36
CTNND1-207ENST00000426142 RPP21Q9H633 154 aaKnown RBP6.56□□□□□ -1.36
CTNND1-207ENST00000426142 SDF2L1Q9HCN8 221 aa6.56□□□□□ -1.36
CTNND1-207ENST00000426142 CEP250Q9BV73 2442 aa6.56□□□□□ -1.36
CTNND1-207ENST00000426142 TMEM178BH3BS89 294 aa6.56□□□□□ -1.36
CTNND1-207ENST00000426142 APOHP02749 345 aaPredicted RBP6.56□□□□□ -1.36
CTNND1-207ENST00000426142 PPIFP30405 207 aaKnown RBP6.56□□□□□ -1.36
CTNND1-207ENST00000426142 ZNF256Q9Y2P7 627 aaPredicted RBP6.56□□□□□ -1.36
CTNND1-207ENST00000426142 MED12Q93074 2177 aa6.56□□□□□ -1.36
CTNND1-207ENST00000426142 CXorf65A6NEN9 183 aa6.56□□□□□ -1.36
CTNND1-207ENST00000426142 TMEM250H0YL14 139 aa6.56□□□□□ -1.36
CTNND1-207ENST00000426142 TCF21O43680 179 aa6.56□□□□□ -1.36
CTNND1-207ENST00000426142 TMEM144Q7Z5S9 345 aa6.56□□□□□ -1.36
CTNND1-207ENST00000426142 FAM89BQ8N5H3 189 aa6.56□□□□□ -1.36
CTNND1-207ENST00000426142 TMEM167AQ8TBQ9 72 aa6.56□□□□□ -1.36
CTNND1-207ENST00000426142 IL36BQ9NZH7 164 aa6.56□□□□□ -1.36
CTNND1-207ENST00000426142 SIP14410 1827 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 IGKV3D-20A0A0C4DH25 116 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 SRP19P09132 144 aaKnown RBP6.55□□□□□ -1.36
CTNND1-207ENST00000426142 TMEM136Q6ZRR5 245 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 C8orf46Q8TAG6 207 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 TRAV8-6A0A0B4J262 113 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 PSCAO43653 123 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 IGHV1-8P0DP01 117 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 CIRBPQ14011 172 aaKnown RBP6.55□□□□□ -1.36
CTNND1-207ENST00000426142 PMCHL1Q16048 86 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 FER1L6-AS1Q8NA97 138 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 TMEM70Q9BUB7 260 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 COL25A1Q9BXS0 654 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-207ENST00000426142 TCF20Q9UGU0 1960 aaKnown RBP6.55□□□□□ -1.36
CTNND1-207ENST00000426142 KIF26BQ2KJY2 2108 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 CNOT1A5YKK6 2376 aaKnown RBP6.55□□□□□ -1.36
CTNND1-207ENST00000426142 TRAV5A0A0B4J249 113 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 C1QTNF9BB2RNN3 333 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 SRRM5B3KS81 715 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 SNAI2O43623 268 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 B3GALT5-AS1P59052 145 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 PNRC2Q9NPJ4 139 aaKnown RBP6.55□□□□□ -1.36
CTNND1-207ENST00000426142 CRIM1Q9NZV1 1036 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 ZNF581Q9P0T4 197 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 MGAMO43451 1857 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 TRBV9A0A0B4J1U6 114 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 COL8A2P25067 703 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 RLFQ13129 1914 aa6.55□□□□□ -1.36
CTNND1-207ENST00000426142 A0A1B0GUT8 65 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 ZNF98A6NK75 572 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 VENTXO95231 258 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 COX6CP09669 75 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 MRAP2Q96G30 205 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 TOMM7Q9P0U1 55 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 TICRRQ7Z2Z1 1910 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 TRAV41A0A0B4J266 112 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 H7C1H1 209 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 MYOD1P15172 320 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 PRCDQ00LT1 54 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 SLC25A34Q6PIV7 304 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 SSBP4Q9BWG4 385 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-207ENST00000426142 VSIRQ9H7M9 311 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 OTORQ9NRC9 128 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 FREM3P0C091 2139 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 LY6G6FQ5SQ64 297 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 ZNF474Q6S9Z5 364 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-207ENST00000426142 SSC4DQ8WTU2 575 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 SCGB3A1Q96QR1 104 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 WFDC1Q9HC57 220 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 PGPEP1LA6NFU8 196 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 HIGD1CA8MV81 97 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 LINC00205P59089 165 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 RPL15P61313 204 aaKnown RBP6.54□□□□□ -1.36
CTNND1-207ENST00000426142 SRSF3P84103 164 aaKnown RBP6.54□□□□□ -1.36
CTNND1-207ENST00000426142 PAX8Q06710 450 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 LBHQ53QV2 105 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-207ENST00000426142 FAM209BQ5JX69 171 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 LYPD2Q6UXB3 125 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 TCF23Q7RTU1 214 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 MAPK1IP1LQ8NDC0 245 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 ZNF414Q96IQ9 312 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 TRAV3A0A0B4J244 114 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 IGHV1-3A0A0C4DH29 117 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 STAG3L2P0CL84 134 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 NAT1P18440 290 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 COL5A1-AS1Q5SY13 56 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 PVRIGQ6DKI7 326 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 LRTM2Q8N967 370 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 ST6GALNAC3Q8NDV1 305 aa6.54□□□□□ -1.36
CTNND1-207ENST00000426142 CACNA1GO43497 2377 aa6.53□□□□□ -1.36
CTNND1-207ENST00000426142 H0YIZ8 118 aa6.53□□□□□ -1.36
CTNND1-207ENST00000426142 H3BUX3 64 aa6.53□□□□□ -1.36
CTNND1-207ENST00000426142 LDLRAD4O15165 306 aa6.53□□□□□ -1.36
CTNND1-207ENST00000426142 SAP30O75446 220 aa6.53□□□□□ -1.36
CTNND1-207ENST00000426142 KLF17Q5JT82 389 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-207ENST00000426142 PRR31Q5SQ13 230 aa6.53□□□□□ -1.36
CTNND1-207ENST00000426142 FAM19A2Q8N3H0 131 aa6.53□□□□□ -1.36
CTNND1-207ENST00000426142 RPRMLQ8N4K4 120 aa6.53□□□□□ -1.36
CTNND1-207ENST00000426142 OR5AN1Q8NGI8 311 aa6.53□□□□□ -1.36
CTNND1-207ENST00000426142 ST6GALNAC6Q969X2 333 aa6.53□□□□□ -1.36
CTNND1-207ENST00000426142 FOXC2Q99958 501 aa6.53□□□□□ -1.36
CTNND1-207ENST00000426142 FBLN5Q9UBX5 448 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms