RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 SMCO1Q147U7 214 aa13.85□□□□□ -0.19
MSH5-207ENST00000425703 HAGHQ16775 308 aa13.85□□□□□ -0.19
MSH5-207ENST00000425703 C2orf83Q53S99 150 aa13.85□□□□□ -0.19
MSH5-207ENST00000425703 LYZL2Q7Z4W2 148 aa13.85□□□□□ -0.19
MSH5-207ENST00000425703 TMED4Q7Z7H5 227 aa13.85□□□□□ -0.19
MSH5-207ENST00000425703 LRTM2Q8N967 370 aa13.85□□□□□ -0.19
MSH5-207ENST00000425703 OR52B4Q8NGK2 314 aa13.85□□□□□ -0.19
MSH5-207ENST00000425703 A0A1B0GU03 582 aa13.84□□□□□ -0.19
MSH5-207ENST00000425703 RPS10-NUDT3A0A1W2PQS6 291 aa13.84□□□□□ -0.19
MSH5-207ENST00000425703 CEBPZOSA8MTT3 80 aa13.84□□□□□ -0.19
MSH5-207ENST00000425703 SCGB2A1O75556 95 aa13.84□□□□□ -0.19
MSH5-207ENST00000425703 SCAF4O95104 1147 aaKnown RBP13.84□□□□□ -0.19
MSH5-207ENST00000425703 TMEM50AO95807 157 aa13.84□□□□□ -0.19
MSH5-207ENST00000425703 OPRK1P41145 380 aa13.84□□□□□ -0.19
MSH5-207ENST00000425703 TNFRSF9Q07011 255 aa13.84□□□□□ -0.19
MSH5-207ENST00000425703 RBMS2Q15434 407 aaKnown RBP13.84□□□□□ -0.19
MSH5-207ENST00000425703 TRIQKQ629K1 86 aa13.84□□□□□ -0.19
MSH5-207ENST00000425703 NOXA1Q86UR1 476 aa13.84□□□□□ -0.19
MSH5-207ENST00000425703 SLC24A4Q8NFF2 622 aa13.84□□□□□ -0.19
MSH5-207ENST00000425703 OR4X1Q8NH49 305 aa13.84□□□□□ -0.19
MSH5-207ENST00000425703 RNASEH2CQ8TDP1 164 aaKnown RBP13.84□□□□□ -0.19
MSH5-207ENST00000425703 SPATA25Q9BR10 227 aa13.84□□□□□ -0.19
MSH5-207ENST00000425703 HIPK2Q9H2X6 1198 aa13.84□□□□□ -0.19
MSH5-207ENST00000425703 FNDC4Q9H6D8 234 aaPredicted RBP13.84□□□□□ -0.19
MSH5-207ENST00000425703 PRR13Q9NZ81 148 aa13.84□□□□□ -0.19
MSH5-207ENST00000425703 HSPB7Q9UBY9 170 aa13.84□□□□□ -0.19
MSH5-207ENST00000425703 SMPXQ9UHP9 88 aa13.84□□□□□ -0.19
MSH5-207ENST00000425703 HUWE1Q7Z6Z7 4374 aaKnown RBP13.84□□□□□ -0.19
MSH5-207ENST00000425703 IGHV7-4-1A0A0J9YVY3 117 aa13.83□□□□□ -0.2
MSH5-207ENST00000425703 CLN5O75503 358 aa13.83□□□□□ -0.2
MSH5-207ENST00000425703 YIF1AO95070 293 aa13.83□□□□□ -0.2
MSH5-207ENST00000425703 INPP1P49441 399 aa13.83□□□□□ -0.2
MSH5-207ENST00000425703 UBE2MP61081 183 aaKnown RBP13.83□□□□□ -0.2
MSH5-207ENST00000425703 BAK1Q16611 211 aa13.83□□□□□ -0.2
MSH5-207ENST00000425703 ZNF600Q6ZNG1 722 aa13.83□□□□□ -0.2
MSH5-207ENST00000425703 DEFB125Q8N687 156 aa13.83□□□□□ -0.2
MSH5-207ENST00000425703 GINS3Q9BRX5 216 aa13.83□□□□□ -0.2
MSH5-207ENST00000425703 IGHV3OR16-8A0A075B7F1 116 aa13.82□□□□□ -0.2
MSH5-207ENST00000425703 TRAV30A0A087WSZ9 112 aa13.82□□□□□ -0.2
MSH5-207ENST00000425703 TRAV14DV4A0A0A6YYC5 116 aa13.82□□□□□ -0.2
MSH5-207ENST00000425703 CD5P06127 495 aa13.82□□□□□ -0.2
MSH5-207ENST00000425703 SLC25A6P12236 298 aa13.82□□□□□ -0.2
MSH5-207ENST00000425703 ATP5IP56385 69 aaPredicted RBP13.82□□□□□ -0.2
MSH5-207ENST00000425703 TOMM20LQ6UXN7 152 aa13.82□□□□□ -0.2
MSH5-207ENST00000425703 CENPSQ8N2Z9 138 aa13.82□□□□□ -0.2
MSH5-207ENST00000425703 TMEM116Q8NCL8 245 aa13.82□□□□□ -0.2
MSH5-207ENST00000425703 RHPN1-AS1Q9BWJ2 59 aa13.82□□□□□ -0.2
MSH5-207ENST00000425703 SRD5A3Q9H8P0 318 aa13.82□□□□□ -0.2
MSH5-207ENST00000425703 SELENOKQ9Y6D0 94 aa13.82□□□□□ -0.2
MSH5-207ENST00000425703 U3KQ87 197 aa13.82□□□□□ -0.2
MSH5-207ENST00000425703 CHEK1O14757 476 aa13.81□□□□□ -0.2
MSH5-207ENST00000425703 ZNF207O43670 478 aaKnown RBP13.81□□□□□ -0.2
MSH5-207ENST00000425703 SLC25A4P12235 298 aa13.81□□□□□ -0.2
MSH5-207ENST00000425703 VAMP1P23763 118 aa13.81□□□□□ -0.2
MSH5-207ENST00000425703 BMI1P35226 326 aa13.81□□□□□ -0.2
MSH5-207ENST00000425703 SDHCQ99643 169 aaPredicted RBP13.81□□□□□ -0.2
MSH5-207ENST00000425703 FAM110AQ9BQ89 295 aa13.81□□□□□ -0.2
MSH5-207ENST00000425703 C7orf50Q9BRJ6 194 aaKnown RBP13.81□□□□□ -0.2
MSH5-207ENST00000425703 OR4C46A6NHA9 309 aa13.8□□□□□ -0.2
MSH5-207ENST00000425703 PITX3O75364 302 aa13.8□□□□□ -0.2
MSH5-207ENST00000425703 NDUFB6O95139 128 aa13.8□□□□□ -0.2
MSH5-207ENST00000425703 SFT2D2O95562 160 aa13.8□□□□□ -0.2
MSH5-207ENST00000425703 NPY1RP25929 384 aa13.8□□□□□ -0.2
MSH5-207ENST00000425703 PPP1R1AQ13522 171 aa13.8□□□□□ -0.2
MSH5-207ENST00000425703 ETFRF1Q6IPR1 90 aa13.8□□□□□ -0.2
MSH5-207ENST00000425703 DTD1Q8TEA8 209 aa13.8□□□□□ -0.2
MSH5-207ENST00000425703 TMEM170AQ8WVE7 144 aa13.8□□□□□ -0.2
MSH5-207ENST00000425703 WFDC10AQ9H1F0 79 aa13.8□□□□□ -0.2
MSH5-207ENST00000425703 ZFAND3Q9H8U3 227 aa13.8□□□□□ -0.2
MSH5-207ENST00000425703 MRPL36Q9P0J6 103 aaKnown RBP13.8□□□□□ -0.2
MSH5-207ENST00000425703 TMED3Q9Y3Q3 217 aa13.8□□□□□ -0.2
MSH5-207ENST00000425703 PUS1Q9Y606 427 aaKnown RBP eCLIP13.8□□□□□ -0.2
MSH5-207ENST00000425703 RBMY1BA6NDE4 496 aaKnown RBP13.79□□□□□ -0.2
MSH5-207ENST00000425703 RBMY1EA6NEQ0 496 aaKnown RBP13.79□□□□□ -0.2
MSH5-207ENST00000425703 CENPXA8MT69 81 aa13.79□□□□□ -0.2
MSH5-207ENST00000425703 FAM90A26D6RGX4 464 aa13.79□□□□□ -0.2
MSH5-207ENST00000425703 RBMY1DP0C7P1 496 aaKnown RBP13.79□□□□□ -0.2
MSH5-207ENST00000425703 MLANAQ16655 118 aa13.79□□□□□ -0.2
MSH5-207ENST00000425703 PRSS54Q6PEW0 395 aa13.79□□□□□ -0.2
MSH5-207ENST00000425703 OR1S1Q8NH92 325 aa13.79□□□□□ -0.2
MSH5-207ENST00000425703 CITED4Q96RK1 184 aa13.79□□□□□ -0.2
MSH5-207ENST00000425703 RNF2Q99496 336 aa13.79□□□□□ -0.2
MSH5-207ENST00000425703 C3orf84H3BNL1 204 aa13.78□□□□□ -0.2
MSH5-207ENST00000425703 IGKV1-17P01599 117 aa13.78□□□□□ -0.2
MSH5-207ENST00000425703 IL7P13232 177 aa13.78□□□□□ -0.2
MSH5-207ENST00000425703 OR1S2Q8NGQ3 325 aa13.78□□□□□ -0.2
MSH5-207ENST00000425703 RBKSQ9H477 322 aa13.78□□□□□ -0.2
MSH5-207ENST00000425703 VSIRQ9H7M9 311 aa13.78□□□□□ -0.2
MSH5-207ENST00000425703 NXPH3O95157 252 aa13.77□□□□□ -0.21
MSH5-207ENST00000425703 IFNA10P01566 189 aa13.77□□□□□ -0.21
MSH5-207ENST00000425703 IGLC1P0CG04 106 aa13.77□□□□□ -0.21
MSH5-207ENST00000425703 CNPY1Q3B7I2 92 aa13.77□□□□□ -0.21
MSH5-207ENST00000425703 FAM90A2PQ658T7 463 aa13.77□□□□□ -0.21
MSH5-207ENST00000425703 LINC00299Q6ZSB3 139 aa13.77□□□□□ -0.21
MSH5-207ENST00000425703 RND2P52198 227 aa13.76□□□□□ -0.21
MSH5-207ENST00000425703 CMC4P56277 68 aaPredicted RBP13.76□□□□□ -0.21
MSH5-207ENST00000425703 YPEL3P61236 119 aaPredicted RBP13.76□□□□□ -0.21
MSH5-207ENST00000425703 GGTLC1Q9BX51 225 aa13.76□□□□□ -0.21
MSH5-207ENST00000425703 TMEM231Q9H6L2 316 aa13.76□□□□□ -0.21
MSH5-207ENST00000425703 NBEAL2Q6ZNJ1 2754 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms