RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 GPX4P36969 197 aaPredicted RBP12.41□□□□□ -0.42
SHOX2-202ENST00000425436 PPT1P50897 306 aa12.41□□□□□ -0.42
SHOX2-202ENST00000425436 ELLP55199 621 aaPredicted RBP12.41□□□□□ -0.42
SHOX2-202ENST00000425436 HES1Q14469 280 aa12.41□□□□□ -0.42
SHOX2-202ENST00000425436 TEPPQ6URK8 271 aa12.41□□□□□ -0.42
SHOX2-202ENST00000425436 TREML4Q6UXN2 200 aa12.41□□□□□ -0.42
SHOX2-202ENST00000425436 ACTL6BO94805 426 aa12.4□□□□□ -0.42
SHOX2-202ENST00000425436 FAM106CPP0CH98 169 aa12.4□□□□□ -0.42
SHOX2-202ENST00000425436 CCL20P78556 96 aa12.4□□□□□ -0.42
SHOX2-202ENST00000425436 BTN1A1Q13410 526 aa12.4□□□□□ -0.42
SHOX2-202ENST00000425436 TMEM170AQ8WVE7 144 aa12.4□□□□□ -0.42
SHOX2-202ENST00000425436 LSM4Q9Y4Z0 139 aaKnown RBP12.4□□□□□ -0.42
SHOX2-202ENST00000425436 MAP1LC3B2A6NCE7 125 aa12.39□□□□□ -0.43
SHOX2-202ENST00000425436 C9JQL5 133 aa12.39□□□□□ -0.43
SHOX2-202ENST00000425436 COMPP49747 757 aaPredicted RBP12.39□□□□□ -0.43
SHOX2-202ENST00000425436 HABP2Q14520 560 aaPredicted RBP12.39□□□□□ -0.43
SHOX2-202ENST00000425436 KRTAP24-1Q3LI83 254 aa12.39□□□□□ -0.43
SHOX2-202ENST00000425436 TMEM144Q7Z5S9 345 aa12.39□□□□□ -0.43
SHOX2-202ENST00000425436 RPP25LQ8N5L8 163 aaKnown RBP12.39□□□□□ -0.43
SHOX2-202ENST00000425436 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.39□□□□□ -0.43
SHOX2-202ENST00000425436 RNASEH2CQ8TDP1 164 aaKnown RBP12.39□□□□□ -0.43
SHOX2-202ENST00000425436 P2RX4Q99571 388 aa12.39□□□□□ -0.43
SHOX2-202ENST00000425436 MAP1LC3BQ9GZQ8 125 aa12.39□□□□□ -0.43
SHOX2-202ENST00000425436 VSIRQ9H7M9 311 aa12.39□□□□□ -0.43
SHOX2-202ENST00000425436 ZNF430Q9H8G1 570 aaPredicted RBP12.39□□□□□ -0.43
SHOX2-202ENST00000425436 SLC25A17O43808 307 aa12.38□□□□□ -0.43
SHOX2-202ENST00000425436 CRYGBP07316 175 aa12.38□□□□□ -0.43
SHOX2-202ENST00000425436 RNASE2P10153 161 aaKnown RBP12.38□□□□□ -0.43
SHOX2-202ENST00000425436 PRSS8Q16651 343 aa12.38□□□□□ -0.43
SHOX2-202ENST00000425436 SOHLH1Q5JUK2 328 aa12.38□□□□□ -0.43
SHOX2-202ENST00000425436 ACSM6Q6P461 480 aa12.38□□□□□ -0.43
SHOX2-202ENST00000425436 LCN15Q6UWW0 184 aa12.38□□□□□ -0.43
SHOX2-202ENST00000425436 EAF1Q96JC9 268 aaPredicted RBP12.38□□□□□ -0.43
SHOX2-202ENST00000425436 RITA1Q96K30 269 aa12.38□□□□□ -0.43
SHOX2-202ENST00000425436 SRSF8Q9BRL6 282 aaKnown RBP12.38□□□□□ -0.43
SHOX2-202ENST00000425436 A0A1B0GV50 99 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 SEC14L6B5MCN3 397 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 OPN1MWP04001 364 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 CRYBA1P05813 215 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 OPN1MW2P0DN77 364 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 OPN1MW3P0DN78 364 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 TMEM11P17152 192 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 RPL29P47914 159 aaKnown RBP12.37□□□□□ -0.43
SHOX2-202ENST00000425436 PSG5Q15238 335 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 ZNF726P1Q15940 193 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 GUCA2BQ16661 112 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 VAX2Q9UIW0 290 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 PITPNC1Q9UKF7 332 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 SIGLEC9Q9Y336 463 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 LOC102723971A0A1B0GUV8 181 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 A0A1W2PPV4 95 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 BCL2P10415 239 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 MYOD1P15172 320 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 HAGHQ16775 308 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 ARSJQ5FYB0 599 aaPredicted RBP12.37□□□□□ -0.43
SHOX2-202ENST00000425436 ETFRF1Q6IPR1 90 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 CLRN3Q8NCR9 226 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 OR2T10Q8NGZ9 312 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 RBM14Q96PK6 669 aaKnown RBP12.37□□□□□ -0.43
SHOX2-202ENST00000425436 RARRES2Q99969 163 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 SLC25A33Q9BSK2 321 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 C19orf24Q9BVV8 132 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 GGTLC1Q9BX51 225 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 MANBALQ9NQG1 85 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 GNG13Q9P2W3 67 aa12.37□□□□□ -0.43
SHOX2-202ENST00000425436 MOSP00540 346 aa12.36□□□□□ -0.43
SHOX2-202ENST00000425436 RPL27AP46776 148 aaKnown RBP12.36□□□□□ -0.43
SHOX2-202ENST00000425436 CDC34P49427 236 aaPredicted RBP12.36□□□□□ -0.43
SHOX2-202ENST00000425436 PSMB3P49720 205 aa12.36□□□□□ -0.43
SHOX2-202ENST00000425436 CD69Q07108 199 aa12.36□□□□□ -0.43
SHOX2-202ENST00000425436 EBI3Q14213 229 aa12.36□□□□□ -0.43
SHOX2-202ENST00000425436 ICAM4Q14773 271 aa12.36□□□□□ -0.43
SHOX2-202ENST00000425436 ATRAIDQ6UW56 229 aa12.36□□□□□ -0.43
SHOX2-202ENST00000425436 PPP1R27Q86WC6 154 aa12.36□□□□□ -0.43
SHOX2-202ENST00000425436 RAB24Q969Q5 203 aa12.36□□□□□ -0.43
SHOX2-202ENST00000425436 MGST2Q99735 147 aa12.36□□□□□ -0.43
SHOX2-202ENST00000425436 C1RLQ9NZP8 487 aa12.36□□□□□ -0.43
SHOX2-202ENST00000425436 PXMP4Q9Y6I8 212 aa12.36□□□□□ -0.43
SHOX2-202ENST00000425436 SH2D7A6NKC9 451 aaPredicted RBP12.35□□□□□ -0.43
SHOX2-202ENST00000425436 NCBP2LA6PVI3 153 aaKnown RBP12.35□□□□□ -0.43
SHOX2-202ENST00000425436 CORTO00230 105 aa12.35□□□□□ -0.43
SHOX2-202ENST00000425436 SRP19P09132 144 aaKnown RBP12.35□□□□□ -0.43
SHOX2-202ENST00000425436 BLCAPP62952 87 aa12.35□□□□□ -0.43
SHOX2-202ENST00000425436 FAM122CQ6P4D5 195 aa12.35□□□□□ -0.43
SHOX2-202ENST00000425436 ZNF114Q8NC26 417 aa12.35□□□□□ -0.43
SHOX2-202ENST00000425436 SLC35E1Q96K37 410 aa12.35□□□□□ -0.43
SHOX2-202ENST00000425436 METTL1Q9UBP6 276 aaKnown RBP12.35□□□□□ -0.43
SHOX2-202ENST00000425436 OR13C7P0DN81 318 aa12.34□□□□□ -0.43
SHOX2-202ENST00000425436 CNTFRP26992 372 aa12.34□□□□□ -0.43
SHOX2-202ENST00000425436 B2MP61769 119 aa12.34□□□□□ -0.43
SHOX2-202ENST00000425436 Q6ZS46 218 aa12.34□□□□□ -0.43
SHOX2-202ENST00000425436 SLC35E3Q7Z769 313 aa12.34□□□□□ -0.43
SHOX2-202ENST00000425436 Q8N6K4 173 aa12.34□□□□□ -0.43
SHOX2-202ENST00000425436 NPBQ8NG41 125 aa12.34□□□□□ -0.43
SHOX2-202ENST00000425436 OR10W1Q8NGF6 305 aa12.34□□□□□ -0.43
SHOX2-202ENST00000425436 RXFP4Q8TDU9 374 aa12.34□□□□□ -0.43
SHOX2-202ENST00000425436 TMEM158Q8WZ71 300 aa12.34□□□□□ -0.43
SHOX2-202ENST00000425436 MDFIQ99750 246 aa12.34□□□□□ -0.43
SHOX2-202ENST00000425436 ZFP92A6NM28 416 aa12.33□□□□□ -0.44
SHOX2-202ENST00000425436 DNASE2O00115 360 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms