RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 LCN2P80188 198 aa9.59□□□□□ -0.87
PTPRN-204ENST00000423636 ERHP84090 104 aaKnown RBP9.59□□□□□ -0.87
PTPRN-204ENST00000423636 RAB31Q13636 194 aa9.59□□□□□ -0.87
PTPRN-204ENST00000423636 TCTEX1D1Q8N7M0 179 aa9.59□□□□□ -0.87
PTPRN-204ENST00000423636 RPEQ96AT9 228 aa9.59□□□□□ -0.87
PTPRN-204ENST00000423636 TMEM133Q9H2Q1 129 aa9.59□□□□□ -0.87
PTPRN-204ENST00000423636 SMDT1Q9H4I9 107 aa9.59□□□□□ -0.87
PTPRN-204ENST00000423636 XKRY2A2RUG3 117 aa9.59□□□□□ -0.87
PTPRN-204ENST00000423636 CXorf1O96002 111 aa9.59□□□□□ -0.87
PTPRN-204ENST00000423636 PFN1P07737 140 aaKnown RBP9.59□□□□□ -0.87
PTPRN-204ENST00000423636 RHOBP62745 196 aa9.59□□□□□ -0.87
PTPRN-204ENST00000423636 OR1L8Q8NGR8 309 aa9.59□□□□□ -0.87
PTPRN-204ENST00000423636 KIR2DS2P43631 304 aa9.59□□□□□ -0.87
PTPRN-204ENST00000423636 ERVFC1-1P60608 527 aa9.59□□□□□ -0.87
PTPRN-204ENST00000423636 TMEM155Q4W5P6 130 aa9.59□□□□□ -0.87
PTPRN-204ENST00000423636 BCL6BQ8N143 479 aaPredicted RBP9.59□□□□□ -0.87
PTPRN-204ENST00000423636 MANBALQ9NQG1 85 aa9.59□□□□□ -0.87
PTPRN-204ENST00000423636 GSN-AS1Q9NRJ2 163 aa9.59□□□□□ -0.87
PTPRN-204ENST00000423636 ZNF705GA8MUZ8 300 aaPredicted RBP9.58□□□□□ -0.88
PTPRN-204ENST00000423636 GGTLC3B5MD39 225 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 TIMM23O14925 209 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 NUPR1O60356 82 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 IGLV2-23P01705 113 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 FABP1P07148 127 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 IL3RAP26951 378 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 UBE2L3P68036 154 aaKnown RBP9.58□□□□□ -0.88
PTPRN-204ENST00000423636 MMDQ15546 238 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 KDF1Q8NAX2 398 aaPredicted RBP9.58□□□□□ -0.88
PTPRN-204ENST00000423636 OR5AN1Q8NGI8 311 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 OR2T10Q8NGZ9 312 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 NDUFA4L2Q9NRX3 87 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 ZNF355PQ9NSJ1 428 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 SLC45A2Q9UMX9 530 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 WASHC3Q9Y3C0 194 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 NCBP2LA6PVI3 153 aaKnown RBP9.58□□□□□ -0.88
PTPRN-204ENST00000423636 RBP4P02753 201 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 CA7P43166 264 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 TMEM256Q8N2U0 113 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 KLF2Q9Y5W3 355 aaPredicted RBP9.58□□□□□ -0.88
PTPRN-204ENST00000423636 SORL1Q92673 2214 aa9.58□□□□□ -0.88
PTPRN-204ENST00000423636 A0A087WWC5 75 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 MDFIC2A0A1B0GVS7 189 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 F2Z2F3 143 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 CENPWQ5EE01 88 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 MRPL54Q6P161 138 aaKnown RBP9.57□□□□□ -0.88
PTPRN-204ENST00000423636 OR52E5Q8NH55 327 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 CORO2AQ92828 525 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 ADTRPQ96IZ2 230 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 EAF1Q96JC9 268 aaPredicted RBP9.57□□□□□ -0.88
PTPRN-204ENST00000423636 SLC35E1Q96K37 410 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 GAR1Q9NY12 217 aaKnown RBP9.57□□□□□ -0.88
PTPRN-204ENST00000423636 COX7A2P2O60397 106 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 HOXA5P20719 270 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 PAX5Q02548 391 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 CD69Q07108 199 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 PNRC1Q12796 327 aaPredicted RBP9.57□□□□□ -0.88
PTPRN-204ENST00000423636 UNQ6494/PRO21346Q6UXR6 183 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 FAM168AQ92567 244 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 MYO9AB2RTY4 2548 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 CXorf65A6NEN9 183 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 B9A039 149 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 C19orf84I3L1E1 186 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 PATE2Q6UY27 113 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 OR8I2Q8N0Y5 310 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 SFRP2Q96HF1 295 aa9.57□□□□□ -0.88
PTPRN-204ENST00000423636 IGHV1-3A0A0C4DH29 117 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 SEC14L6B5MCN3 397 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 TMEM250H0YL14 139 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 IER3P46695 156 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 NUBP1P53384 320 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 DLX6P56179 175 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 PRR20EP86478 221 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 PRR20CP86479 221 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 PRR20DP86480 221 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 PRR20BP86481 221 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 PRR20AP86496 221 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 ZNF841Q6ZN19 808 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 ST6GALNAC6Q969X2 333 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 TRAV8-1A0A0A6YYK1 113 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 LYZP61626 148 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 LINC00305Q7Z4B0 112 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 TMEM144Q7Z5S9 345 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 LINC00527Q9UJ94 153 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 FBN2P35556 2912 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 IGHV3OR16-13A0A075B7E8 117 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 IGHV3-74A0A0B4J1X5 117 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 DYNAPQ8N1N2 210 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 HIST3H2BBQ8N257 126 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 OSR1Q8TAX0 266 aaPredicted RBP9.56□□□□□ -0.88
PTPRN-204ENST00000423636 PARD6GQ9BYG4 376 aaPredicted RBP9.56□□□□□ -0.88
PTPRN-204ENST00000423636 TRAPPC1Q9Y5R8 145 aa9.56□□□□□ -0.88
PTPRN-204ENST00000423636 NF1P21359 2839 aa9.55□□□□□ -0.88
PTPRN-204ENST00000423636 USP24Q9UPU5 2620 aa9.55□□□□□ -0.88
PTPRN-204ENST00000423636 HELTA6NFD8 242 aa9.55□□□□□ -0.88
PTPRN-204ENST00000423636 GNLYP22749 145 aa9.55□□□□□ -0.88
PTPRN-204ENST00000423636 CDX1P47902 265 aaPredicted RBP9.55□□□□□ -0.88
PTPRN-204ENST00000423636 MEF2CQ06413 473 aaPredicted RBP9.55□□□□□ -0.88
PTPRN-204ENST00000423636 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.55□□□□□ -0.88
PTPRN-204ENST00000423636 RAB9BQ9NP90 201 aa9.55□□□□□ -0.88
PTPRN-204ENST00000423636 BET1LQ9NYM9 111 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms