RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 A0A1W2PRS3 328 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 KIR3DP1A8MWS1 328 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 SDHDO14521 159 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 DEDDO75618 318 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 LGALS1P09382 135 aaKnown RBP2.89□□□□□ -1.95
TOP2A-201ENST00000423485 RPL7P18124 248 aaKnown RBP2.89□□□□□ -1.95
TOP2A-201ENST00000423485 BSXQ3C1V8 233 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 WDR38Q5JTN6 314 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 H3F3CQ6NXT2 135 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 GLIPR1L1Q6UWM5 242 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 PDPNQ86YL7 162 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 ZCCHC24Q8N2G6 241 aaKnown RBP2.89□□□□□ -1.95
TOP2A-201ENST00000423485 OR4A4PQ8NGN8 299 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 OR8J1Q8NGP2 316 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 ZNF503Q96F45 646 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 KCNA7Q96RP8 456 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 C21orf62Q9NYP8 219 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 HIGD1AQ9Y241 93 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 TMEM14DPA8MWL7 114 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 DIRAS1O95057 198 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 GCGP01275 180 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 PRSS1P07477 247 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 PFN1P07737 140 aaKnown RBP2.89□□□□□ -1.95
TOP2A-201ENST00000423485 NCS1P62166 190 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 BLOC1S1P78537 153 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 ALKBH1Q13686 389 aaKnown RBP2.89□□□□□ -1.95
TOP2A-201ENST00000423485 PYDC2Q56P42 97 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 TMEM42Q69YG0 159 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 Q6YL49 198 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 DEPPQ9NTK1 212 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 CLEC2DQ9UHP7 191 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 C20orf202A1L168 122 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 TSTD3H0UI37 97 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 H3BUA1 57 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 PPBPP02775 128 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 RCC1P18754 421 aaPredicted RBP2.89□□□□□ -1.95
TOP2A-201ENST00000423485 TCTEX1D4Q5JR98 221 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 OR2G6Q5TZ20 316 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 MRM1Q6IN84 353 aaKnown RBP2.89□□□□□ -1.95
TOP2A-201ENST00000423485 HOGA1Q86XE5 327 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 ZNF547Q8IVP9 402 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 SIAH3Q8IW03 269 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 OR5P3Q8WZ94 311 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 LYZL4Q96KX0 146 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 ZNF385AQ96PM9 386 aaKnown RBP2.89□□□□□ -1.95
TOP2A-201ENST00000423485 NKX6-2Q9C056 277 aaPredicted RBP2.89□□□□□ -1.95
TOP2A-201ENST00000423485 MED28Q9H204 178 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 NOTCH3Q9UM47 2321 aa2.89□□□□□ -1.95
TOP2A-201ENST00000423485 NOTCH2Q04721 2471 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 TRAV9-1A0A075B6T8 112 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 TRBV5-3A0A0A0MS03 114 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 SERTM2A0A1B0GWG4 89 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 FAM231BA6NCW3 169 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 SPDEFO95238 335 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 PPP1R17O96001 155 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 MT-ND6P03923 174 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 GATA2P23769 480 aaPredicted RBP2.88□□□□□ -1.95
TOP2A-201ENST00000423485 PTGDSP41222 190 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 HNRNPA3P51991 378 aaKnown RBP2.88□□□□□ -1.95
TOP2A-201ENST00000423485 DEFB135Q30KP9 77 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 ANXA2RQ3ZCQ2 193 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 FAM216BQ8N7L0 139 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 INO80EQ8NBZ0 244 aaPredicted RBP2.88□□□□□ -1.95
TOP2A-201ENST00000423485 ZNF75AQ96N20 296 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 C12orf57Q99622 126 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 RNF5Q99942 180 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 MRPL13Q9BYD1 178 aaKnown RBP2.88□□□□□ -1.95
TOP2A-201ENST00000423485 PKIBQ9C010 78 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 HRH4Q9H3N8 390 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 MRPL27Q9P0M9 148 aaKnown RBP2.88□□□□□ -1.95
TOP2A-201ENST00000423485 R4GMQ9 66 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 TRAV1-2A0A0B4J238 106 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 MEX3AA1L020 520 aaKnown RBP2.88□□□□□ -1.95
TOP2A-201ENST00000423485 FGF8P55075 233 aaPredicted RBP2.88□□□□□ -1.95
TOP2A-201ENST00000423485 ELLP55199 621 aaPredicted RBP2.88□□□□□ -1.95
TOP2A-201ENST00000423485 ATP5IP56385 69 aaPredicted RBP2.88□□□□□ -1.95
TOP2A-201ENST00000423485 NDUFA6P56556 154 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 TIRAPP58753 221 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 CYCSP99999 105 aaKnown RBP2.88□□□□□ -1.95
TOP2A-201ENST00000423485 NHLH2Q02577 135 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 AKR1C8PQ5T2L2 129 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 AQP10Q96PS8 301 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 SPAG8Q99932 426 aaPredicted RBP2.88□□□□□ -1.95
TOP2A-201ENST00000423485 ZNF2Q9BSG1 426 aaPredicted RBP2.88□□□□□ -1.95
TOP2A-201ENST00000423485 SDF2L1Q9HCN8 221 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 GPR132Q9UNW8 380 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 MRPS16Q9Y3D3 137 aaKnown RBP2.88□□□□□ -1.95
TOP2A-201ENST00000423485 LRP12Q9Y561 859 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 DNAH17Q9UFH2 4485 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 CLDN34H7C241 214 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 K7EP13 123 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 GYPBP06028 91 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 CCKARP32238 428 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 UBE2D3P61077 147 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 UFM1P61960 85 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 CACNG7P62955 275 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 CEACAM21Q3KPI0 293 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 FAM89BQ8N5H3 189 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 OR2G3Q8NGZ4 309 aa2.88□□□□□ -1.95
TOP2A-201ENST00000423485 THAP6Q8TBB0 222 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms