RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 IGHV7-81A0A0B4J1V7 117 aa7.08□□□□□ -1.28
HPS4-204ENST00000422379 HOXA3O43365 443 aaPredicted RBP7.08□□□□□ -1.28
HPS4-204ENST00000422379 SNAPINO95295 136 aa7.08□□□□□ -1.28
HPS4-204ENST00000422379 AREGP15514 252 aa7.08□□□□□ -1.28
HPS4-204ENST00000422379 NPY1RP25929 384 aa7.08□□□□□ -1.28
HPS4-204ENST00000422379 CX3CL1P78423 397 aa7.08□□□□□ -1.28
HPS4-204ENST00000422379 PRCDQ00LT1 54 aa7.08□□□□□ -1.28
HPS4-204ENST00000422379 HAGHQ16775 308 aa7.08□□□□□ -1.28
HPS4-204ENST00000422379 ASPHD1Q5U4P2 390 aa7.08□□□□□ -1.28
HPS4-204ENST00000422379 LCN15Q6UWW0 184 aa7.08□□□□□ -1.28
HPS4-204ENST00000422379 SLC24A4Q8NFF2 622 aa7.08□□□□□ -1.28
HPS4-204ENST00000422379 MBD3L1Q8WWY6 194 aa7.08□□□□□ -1.28
HPS4-204ENST00000422379 SLC25A33Q9BSK2 321 aa7.08□□□□□ -1.28
HPS4-204ENST00000422379 HINT2Q9BX68 163 aa7.08□□□□□ -1.28
HPS4-204ENST00000422379 ESM1Q9NQ30 184 aa7.08□□□□□ -1.28
HPS4-204ENST00000422379 JMJD1CQ15652 2540 aa7.08□□□□□ -1.28
HPS4-204ENST00000422379 TENM1Q9UKZ4 2725 aa7.08□□□□□ -1.28
HPS4-204ENST00000422379 IGLC7A0M8Q6 106 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 INAFM1C9JVW0 142 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 EIF3GO75821 320 aaKnown RBP eCLIP7.07□□□□□ -1.28
HPS4-204ENST00000422379 IFNA4P05014 189 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 FOSL1P15407 271 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 CTRB1P17538 263 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 FGF8P55075 233 aaPredicted RBP7.07□□□□□ -1.28
HPS4-204ENST00000422379 BLCAPP62952 87 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 DLK1P80370 383 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 ICAM4Q14773 271 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 TNXAQ16473 311 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 FFAR4Q5NUL3 377 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 CTRB2Q6GPI1 263 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 TMEM88Q6PEY1 159 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 RPP25LQ8N5L8 163 aaKnown RBP7.07□□□□□ -1.28
HPS4-204ENST00000422379 SLC35B3Q9H1N7 401 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 PLEKHA3Q9HB20 300 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 DMRT1Q9Y5R6 373 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 SMCO3A2RU48 225 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 MAP1LC3B2A6NCE7 125 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 REG1AP05451 166 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 OR13C7P0DN81 318 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 SRP14P37108 136 aaKnown RBP7.07□□□□□ -1.28
HPS4-204ENST00000422379 MFAP2P55001 183 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 RAB11AP62491 216 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 PLGLAQ15195 96 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 ZNF506Q5JVG8 444 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 CBLN2Q8IUK8 224 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 MMD2Q8IY49 270 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 ZNF709Q8N972 641 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 CLRN3Q8NCR9 226 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 OR5B3Q8NH48 314 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 SRSF12Q8WXF0 261 aaKnown RBP7.07□□□□□ -1.28
HPS4-204ENST00000422379 GGACTQ9BVM4 153 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 MAP1LC3BQ9GZQ8 125 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 SMDT1Q9H4I9 107 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 SLC25A22Q9H936 323 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 GNG13Q9P2W3 67 aa7.07□□□□□ -1.28
HPS4-204ENST00000422379 LOC102723971A0A1B0GUV8 181 aa7.06□□□□□ -1.28
HPS4-204ENST00000422379 C17orf112F2Z3M2 114 aa7.06□□□□□ -1.28
HPS4-204ENST00000422379 HLA-DRB1P01911 266 aa7.06□□□□□ -1.28
HPS4-204ENST00000422379 SRP19P09132 144 aaKnown RBP7.06□□□□□ -1.28
HPS4-204ENST00000422379 BSXQ3C1V8 233 aa7.06□□□□□ -1.28
HPS4-204ENST00000422379 ARSJQ5FYB0 599 aaPredicted RBP7.06□□□□□ -1.28
HPS4-204ENST00000422379 TREML4Q6UXN2 200 aa7.06□□□□□ -1.28
HPS4-204ENST00000422379 OR10G4Q8NGN3 311 aa7.06□□□□□ -1.28
HPS4-204ENST00000422379 OR10G9Q8NGN4 311 aa7.06□□□□□ -1.28
HPS4-204ENST00000422379 OR10G7Q8NGN6 311 aa7.06□□□□□ -1.28
HPS4-204ENST00000422379 OR1L8Q8NGR8 309 aa7.06□□□□□ -1.28
HPS4-204ENST00000422379 RXFP4Q8TDU9 374 aa7.06□□□□□ -1.28
HPS4-204ENST00000422379 COMMD5Q9GZQ3 224 aa7.06□□□□□ -1.28
HPS4-204ENST00000422379 TMEM160Q9NX00 188 aa7.06□□□□□ -1.28
HPS4-204ENST00000422379 MOB4Q9Y3A3 225 aa7.06□□□□□ -1.28
HPS4-204ENST00000422379 ZFP92A6NM28 416 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 HMGB3O15347 200 aaKnown RBP7.05□□□□□ -1.28
HPS4-204ENST00000422379 MBP02144 154 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 HSPB1P04792 205 aaKnown RBP7.05□□□□□ -1.28
HPS4-204ENST00000422379 DEFA4P12838 97 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 RPL27AP46776 148 aaKnown RBP7.05□□□□□ -1.28
HPS4-204ENST00000422379 FXYD3Q14802 87 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 ZNF562Q6V9R5 426 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 MRPL41Q8IXM3 137 aaKnown RBP7.05□□□□□ -1.28
HPS4-204ENST00000422379 SSMEM1Q8WWF3 244 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 MGST2Q99735 147 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 SLC39A9Q9NUM3 307 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 VPREB3Q9UKI3 123 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 CTXND1A0A1B0GTU2 59 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 ATP6V0E1O15342 81 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 MPDU1O75352 247 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 RNASE2P10153 161 aaKnown RBP7.05□□□□□ -1.28
HPS4-204ENST00000422379 BCL2P10415 239 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 ATP5IP56385 69 aaPredicted RBP7.05□□□□□ -1.28
HPS4-204ENST00000422379 TMEM95Q3KNT9 176 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 KHDC3LQ587J8 217 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 AWAT1Q58HT5 328 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 SOHLH1Q5JUK2 328 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 CYB561D1Q8N8Q1 229 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 ARPC1AQ92747 370 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 GGTLC1Q9BX51 225 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 LINC00527Q9UJ94 153 aa7.05□□□□□ -1.28
HPS4-204ENST00000422379 LSM4Q9Y4Z0 139 aaKnown RBP7.05□□□□□ -1.28
HPS4-204ENST00000422379 ATRQ13535 2644 aa7.04□□□□□ -1.28
HPS4-204ENST00000422379 A0A1W2PN81 502 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms