RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 PRR13Q9NZ81 148 aa16.45■□□□□ 0.22
TRAF4-204ENST00000422344 CACFD1Q9UGQ2 172 aa16.45■□□□□ 0.22
TRAF4-204ENST00000422344 EPPK1P58107 5090 aaKnown RBP16.44■□□□□ 0.22
TRAF4-204ENST00000422344 PIGBOS1A0A0B4J2F0 54 aa16.44■□□□□ 0.22
TRAF4-204ENST00000422344 SULT1A3P0DMM9 295 aa16.44■□□□□ 0.22
TRAF4-204ENST00000422344 SULT1A4P0DMN0 295 aa16.44■□□□□ 0.22
TRAF4-204ENST00000422344 OPRK1P41145 380 aa16.44■□□□□ 0.22
TRAF4-204ENST00000422344 HTR2BP41595 481 aa16.44■□□□□ 0.22
TRAF4-204ENST00000422344 LGI3Q8N145 548 aa16.44■□□□□ 0.22
TRAF4-204ENST00000422344 WFDC10AQ9H1F0 79 aa16.44■□□□□ 0.22
TRAF4-204ENST00000422344 SRD5A3Q9H8P0 318 aa16.44■□□□□ 0.22
TRAF4-204ENST00000422344 LYSTQ99698 3801 aa16.43■□□□□ 0.22
TRAF4-204ENST00000422344 SCGB2A1O75556 95 aa16.43■□□□□ 0.22
TRAF4-204ENST00000422344 LYL1P12980 280 aa16.43■□□□□ 0.22
TRAF4-204ENST00000422344 SPAG8Q99932 426 aaPredicted RBP16.43■□□□□ 0.22
TRAF4-204ENST00000422344 A0A0B4J2A0 478 aa16.42■□□□□ 0.22
TRAF4-204ENST00000422344 SUPT4H1P63272 117 aaKnown RBP16.42■□□□□ 0.22
TRAF4-204ENST00000422344 PVRIGQ6DKI7 326 aa16.42■□□□□ 0.22
TRAF4-204ENST00000422344 SLC25A21Q9BQT8 299 aaPredicted RBP16.42■□□□□ 0.22
TRAF4-204ENST00000422344 GINS3Q9BRX5 216 aa16.42■□□□□ 0.22
TRAF4-204ENST00000422344 HIPK2Q9H2X6 1198 aa16.42■□□□□ 0.22
TRAF4-204ENST00000422344 SHPKQ9UHJ6 478 aa16.42■□□□□ 0.22
TRAF4-204ENST00000422344 RPS10-NUDT3A0A1W2PQS6 291 aa16.41■□□□□ 0.22
TRAF4-204ENST00000422344 NXPH3O95157 252 aa16.41■□□□□ 0.22
TRAF4-204ENST00000422344 CCR6P51684 374 aa16.41■□□□□ 0.22
TRAF4-204ENST00000422344 BSXQ3C1V8 233 aa16.41■□□□□ 0.22
TRAF4-204ENST00000422344 TRIQKQ629K1 86 aa16.41■□□□□ 0.22
TRAF4-204ENST00000422344 TMEM116Q8NCL8 245 aa16.41■□□□□ 0.22
TRAF4-204ENST00000422344 SRRQ9GZT4 340 aa16.41■□□□□ 0.22
TRAF4-204ENST00000422344 SMPXQ9UHP9 88 aa16.41■□□□□ 0.22
TRAF4-204ENST00000422344 TRAV14DV4A0A0A6YYC5 116 aa16.4■□□□□ 0.22
TRAF4-204ENST00000422344 IGHV7-4-1A0A0J9YVY3 117 aa16.4■□□□□ 0.22
TRAF4-204ENST00000422344 TSPAN4O14817 238 aa16.4■□□□□ 0.22
TRAF4-204ENST00000422344 VAMP1P23763 118 aa16.4■□□□□ 0.22
TRAF4-204ENST00000422344 BMI1P35226 326 aa16.4■□□□□ 0.22
TRAF4-204ENST00000422344 SMCO1Q147U7 214 aa16.4■□□□□ 0.22
TRAF4-204ENST00000422344 TMEM128Q5BJH2 165 aa16.4■□□□□ 0.22
TRAF4-204ENST00000422344 LYZL2Q7Z4W2 148 aa16.4■□□□□ 0.22
TRAF4-204ENST00000422344 SLC24A4Q8NFF2 622 aa16.4■□□□□ 0.22
TRAF4-204ENST00000422344 OR10C1Q96KK4 312 aa16.4■□□□□ 0.22
TRAF4-204ENST00000422344 NDUFA13Q9P0J0 144 aa16.4■□□□□ 0.22
TRAF4-204ENST00000422344 BIRC6Q9NR09 4857 aa16.4■□□□□ 0.22
TRAF4-204ENST00000422344 TMEM50AO95807 157 aa16.39■□□□□ 0.21
TRAF4-204ENST00000422344 LINC00322Q6ZN03 302 aaPredicted RBP16.39■□□□□ 0.21
TRAF4-204ENST00000422344 ZNF600Q6ZNG1 722 aa16.39■□□□□ 0.21
TRAF4-204ENST00000422344 NOXA1Q86UR1 476 aa16.39■□□□□ 0.21
TRAF4-204ENST00000422344 RHPN1-AS1Q9BWJ2 59 aa16.39■□□□□ 0.21
TRAF4-204ENST00000422344 IGHV3-49A0A0A0MS15 119 aa16.38■□□□□ 0.21
TRAF4-204ENST00000422344 LCE6AA0A183 80 aa16.38■□□□□ 0.21
TRAF4-204ENST00000422344 OR4C46A6NHA9 309 aa16.38■□□□□ 0.21
TRAF4-204ENST00000422344 CLN5O75503 358 aa16.38■□□□□ 0.21
TRAF4-204ENST00000422344 C2orf83Q53S99 150 aa16.38■□□□□ 0.21
TRAF4-204ENST00000422344 NMSQ5H8A3 153 aa16.38■□□□□ 0.21
TRAF4-204ENST00000422344 TOMM20LQ6UXN7 152 aa16.38■□□□□ 0.21
TRAF4-204ENST00000422344 OR4X1Q8NH49 305 aa16.38■□□□□ 0.21
TRAF4-204ENST00000422344 OR1S1Q8NH92 325 aa16.38■□□□□ 0.21
TRAF4-204ENST00000422344 RNASEH2CQ8TDP1 164 aaKnown RBP16.38■□□□□ 0.21
TRAF4-204ENST00000422344 FNDC4Q9H6D8 234 aaPredicted RBP16.38■□□□□ 0.21
TRAF4-204ENST00000422344 PUS1Q9Y606 427 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRAF4-204ENST00000422344 CSMD3Q7Z407 3707 aa16.38■□□□□ 0.21
TRAF4-204ENST00000422344 DNAH1Q9P2D7 4330 aa16.37■□□□□ 0.21
TRAF4-204ENST00000422344 DUXBA0A1W2PPF3 345 aa16.37■□□□□ 0.21
TRAF4-204ENST00000422344 RBMY1BA6NDE4 496 aaKnown RBP16.37■□□□□ 0.21
TRAF4-204ENST00000422344 RBMY1EA6NEQ0 496 aaKnown RBP16.37■□□□□ 0.21
TRAF4-204ENST00000422344 CHEK1O14757 476 aa16.37■□□□□ 0.21
TRAF4-204ENST00000422344 RBMY1DP0C7P1 496 aaKnown RBP16.37■□□□□ 0.21
TRAF4-204ENST00000422344 NPY1RP25929 384 aa16.37■□□□□ 0.21
TRAF4-204ENST00000422344 TNFRSF9Q07011 255 aa16.37■□□□□ 0.21
TRAF4-204ENST00000422344 RBMS2Q15434 407 aaKnown RBP16.37■□□□□ 0.21
TRAF4-204ENST00000422344 ZFAND6Q6FIF0 208 aa16.37■□□□□ 0.21
TRAF4-204ENST00000422344 CENPSQ8N2Z9 138 aa16.37■□□□□ 0.21
TRAF4-204ENST00000422344 ZNF414Q96IQ9 312 aa16.37■□□□□ 0.21
TRAF4-204ENST00000422344 CITED4Q96RK1 184 aa16.37■□□□□ 0.21
TRAF4-204ENST00000422344 RNF2Q99496 336 aa16.37■□□□□ 0.21
TRAF4-204ENST00000422344 NAP1L6A6NFF2 107 aa16.36■□□□□ 0.21
TRAF4-204ENST00000422344 IFNA10P01566 189 aa16.36■□□□□ 0.21
TRAF4-204ENST00000422344 MLANAQ16655 118 aa16.36■□□□□ 0.21
TRAF4-204ENST00000422344 ETFRF1Q6IPR1 90 aa16.36■□□□□ 0.21
TRAF4-204ENST00000422344 DTD1Q8TEA8 209 aa16.36■□□□□ 0.21
TRAF4-204ENST00000422344 HSPB7Q9UBY9 170 aa16.36■□□□□ 0.21
TRAF4-204ENST00000422344 STARD9Q9P2P6 4700 aa16.36■□□□□ 0.21
TRAF4-204ENST00000422344 IGHV3OR16-13A0A075B7E8 117 aa16.35■□□□□ 0.21
TRAF4-204ENST00000422344 TRAV30A0A087WSZ9 112 aa16.35■□□□□ 0.21
TRAF4-204ENST00000422344 IGHV3-74A0A0B4J1X5 117 aa16.35■□□□□ 0.21
TRAF4-204ENST00000422344 A0A1B0GU03 582 aa16.35■□□□□ 0.21
TRAF4-204ENST00000422344 SLC25A4P12235 298 aa16.35■□□□□ 0.21
TRAF4-204ENST00000422344 GGTLC1Q9BX51 225 aa16.35■□□□□ 0.21
TRAF4-204ENST00000422344 MRPL36Q9P0J6 103 aaKnown RBP16.35■□□□□ 0.21
TRAF4-204ENST00000422344 UBQLN2Q9UHD9 624 aa16.35■□□□□ 0.21
TRAF4-204ENST00000422344 LOC102724200A0A096LPH7 203 aaPredicted RBP16.34■□□□□ 0.21
TRAF4-204ENST00000422344 SFT2D2O95562 160 aa16.34■□□□□ 0.21
TRAF4-204ENST00000422344 BAK1Q16611 211 aa16.34■□□□□ 0.21
TRAF4-204ENST00000422344 RBKSQ9H477 322 aa16.34■□□□□ 0.21
TRAF4-204ENST00000422344 TMEM231Q9H6L2 316 aa16.34■□□□□ 0.21
TRAF4-204ENST00000422344 RETNQ9HD89 108 aa16.34■□□□□ 0.21
TRAF4-204ENST00000422344 LINC00854A0A1B0GVQ3 168 aa16.33■□□□□ 0.2
TRAF4-204ENST00000422344 CENPXA8MT69 81 aa16.33■□□□□ 0.2
TRAF4-204ENST00000422344 CD5P06127 495 aa16.33■□□□□ 0.2
TRAF4-204ENST00000422344 RND2P52198 227 aa16.33■□□□□ 0.2
TRAF4-204ENST00000422344 PPP1R1AQ13522 171 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms