RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 SPAG8Q99932 426 aaPredicted RBP11.09□□□□□ -0.63
LINC01840-201ENST00000421870 PRR13Q9NZ81 148 aa11.09□□□□□ -0.63
LINC01840-201ENST00000421870 IGHV3OR16-8A0A075B7F1 116 aa11.08□□□□□ -0.64
LINC01840-201ENST00000421870 IGHV7-4-1A0A0J9YVY3 117 aa11.08□□□□□ -0.64
LINC01840-201ENST00000421870 ZNF207O43670 478 aaKnown RBP11.08□□□□□ -0.64
LINC01840-201ENST00000421870 SULT1A3P0DMM9 295 aa11.08□□□□□ -0.64
LINC01840-201ENST00000421870 SULT1A4P0DMN0 295 aa11.08□□□□□ -0.64
LINC01840-201ENST00000421870 ANXA3P12429 323 aa11.08□□□□□ -0.64
LINC01840-201ENST00000421870 C2orf83Q53S99 150 aa11.08□□□□□ -0.64
LINC01840-201ENST00000421870 LAMTOR1Q6IAA8 161 aa11.08□□□□□ -0.64
LINC01840-201ENST00000421870 TOMM20LQ6UXN7 152 aa11.08□□□□□ -0.64
LINC01840-201ENST00000421870 LGI3Q8N145 548 aa11.08□□□□□ -0.64
LINC01840-201ENST00000421870 OR4X1Q8NH49 305 aa11.08□□□□□ -0.64
LINC01840-201ENST00000421870 CITED4Q96RK1 184 aa11.08□□□□□ -0.64
LINC01840-201ENST00000421870 SPATA25Q9BR10 227 aa11.08□□□□□ -0.64
LINC01840-201ENST00000421870 WFDC10AQ9H1F0 79 aa11.08□□□□□ -0.64
LINC01840-201ENST00000421870 HEYLQ9NQ87 328 aaPredicted RBP11.08□□□□□ -0.64
LINC01840-201ENST00000421870 NDUFA13Q9P0J0 144 aa11.08□□□□□ -0.64
LINC01840-201ENST00000421870 MRPL36Q9P0J6 103 aaKnown RBP11.08□□□□□ -0.64
LINC01840-201ENST00000421870 STAB2Q8WWQ8 2551 aa11.08□□□□□ -0.64
LINC01840-201ENST00000421870 TRAV14DV4A0A0A6YYC5 116 aa11.07□□□□□ -0.64
LINC01840-201ENST00000421870 PIGBOS1A0A0B4J2F0 54 aa11.07□□□□□ -0.64
LINC01840-201ENST00000421870 CHEK1O14757 476 aa11.07□□□□□ -0.64
LINC01840-201ENST00000421870 CLN5O75503 358 aa11.07□□□□□ -0.64
LINC01840-201ENST00000421870 YIF1AO95070 293 aa11.07□□□□□ -0.64
LINC01840-201ENST00000421870 CCR6P51684 374 aa11.07□□□□□ -0.64
LINC01840-201ENST00000421870 SRPXP78539 464 aa11.07□□□□□ -0.64
LINC01840-201ENST00000421870 BAK1Q16611 211 aa11.07□□□□□ -0.64
LINC01840-201ENST00000421870 LRTM2Q8N967 370 aa11.07□□□□□ -0.64
LINC01840-201ENST00000421870 TMEM116Q8NCL8 245 aa11.07□□□□□ -0.64
LINC01840-201ENST00000421870 HIPK2Q9H2X6 1198 aa11.07□□□□□ -0.64
LINC01840-201ENST00000421870 SRD5A3Q9H8P0 318 aa11.07□□□□□ -0.64
LINC01840-201ENST00000421870 HSPB7Q9UBY9 170 aa11.07□□□□□ -0.64
LINC01840-201ENST00000421870 A0A1B0GU03 582 aa11.06□□□□□ -0.64
LINC01840-201ENST00000421870 C3orf84H3BNL1 204 aa11.06□□□□□ -0.64
LINC01840-201ENST00000421870 SMCO1Q147U7 214 aa11.06□□□□□ -0.64
LINC01840-201ENST00000421870 FAM90A2PQ658T7 463 aa11.06□□□□□ -0.64
LINC01840-201ENST00000421870 ZNF600Q6ZNG1 722 aa11.06□□□□□ -0.64
LINC01840-201ENST00000421870 TMED4Q7Z7H5 227 aa11.06□□□□□ -0.64
LINC01840-201ENST00000421870 RNASEH2CQ8TDP1 164 aaKnown RBP11.06□□□□□ -0.64
LINC01840-201ENST00000421870 TMEM170AQ8WVE7 144 aa11.06□□□□□ -0.64
LINC01840-201ENST00000421870 RNF2Q99496 336 aa11.06□□□□□ -0.64
LINC01840-201ENST00000421870 SDHCQ99643 169 aaPredicted RBP11.06□□□□□ -0.64
LINC01840-201ENST00000421870 FAM110AQ9BQ89 295 aa11.06□□□□□ -0.64
LINC01840-201ENST00000421870 RHPN1-AS1Q9BWJ2 59 aa11.06□□□□□ -0.64
LINC01840-201ENST00000421870 ZFAND3Q9H8U3 227 aa11.06□□□□□ -0.64
LINC01840-201ENST00000421870 EDA2RQ9HAV5 297 aa11.06□□□□□ -0.64
LINC01840-201ENST00000421870 NBEAL2Q6ZNJ1 2754 aa11.06□□□□□ -0.64
LINC01840-201ENST00000421870 TRAV30A0A087WSZ9 112 aa11.05□□□□□ -0.64
LINC01840-201ENST00000421870 DUXBA0A1W2PPF3 345 aa11.05□□□□□ -0.64
LINC01840-201ENST00000421870 CEBPZOSA8MTT3 80 aa11.05□□□□□ -0.64
LINC01840-201ENST00000421870 PITX3O75364 302 aa11.05□□□□□ -0.64
LINC01840-201ENST00000421870 OPRK1P41145 380 aa11.05□□□□□ -0.64
LINC01840-201ENST00000421870 TNFRSF9Q07011 255 aa11.05□□□□□ -0.64
LINC01840-201ENST00000421870 SLC24A4Q8NFF2 622 aa11.05□□□□□ -0.64
LINC01840-201ENST00000421870 VSIRQ9H7M9 311 aa11.05□□□□□ -0.64
LINC01840-201ENST00000421870 PUS1Q9Y606 427 aaKnown RBP eCLIP11.05□□□□□ -0.64
LINC01840-201ENST00000421870 U3KQ87 197 aa11.05□□□□□ -0.64
LINC01840-201ENST00000421870 RPS10-NUDT3A0A1W2PQS6 291 aa11.04□□□□□ -0.64
LINC01840-201ENST00000421870 NAP1L6A6NFF2 107 aa11.04□□□□□ -0.64
LINC01840-201ENST00000421870 IGKV1-17P01599 117 aa11.04□□□□□ -0.64
LINC01840-201ENST00000421870 SLC25A4P12235 298 aa11.04□□□□□ -0.64
LINC01840-201ENST00000421870 SLC25A6P12236 298 aa11.04□□□□□ -0.64
LINC01840-201ENST00000421870 ATP5IP56385 69 aaPredicted RBP11.04□□□□□ -0.64
LINC01840-201ENST00000421870 PRSS54Q6PEW0 395 aa11.04□□□□□ -0.64
LINC01840-201ENST00000421870 NOXA1Q86UR1 476 aa11.04□□□□□ -0.64
LINC01840-201ENST00000421870 MUC7Q8TAX7 377 aa11.04□□□□□ -0.64
LINC01840-201ENST00000421870 GINS3Q9BRX5 216 aa11.04□□□□□ -0.64
LINC01840-201ENST00000421870 KMT2CQ8NEZ4 4911 aaKnown RBP11.04□□□□□ -0.64
LINC01840-201ENST00000421870 IGHV3-49A0A0A0MS15 119 aa11.03□□□□□ -0.64
LINC01840-201ENST00000421870 OR4C46A6NHA9 309 aa11.03□□□□□ -0.64
LINC01840-201ENST00000421870 NXPH3O95157 252 aa11.03□□□□□ -0.64
LINC01840-201ENST00000421870 SFT2D2O95562 160 aa11.03□□□□□ -0.64
LINC01840-201ENST00000421870 APOHP02749 345 aaPredicted RBP11.03□□□□□ -0.64
LINC01840-201ENST00000421870 CD5P06127 495 aa11.03□□□□□ -0.64
LINC01840-201ENST00000421870 NPY1RP25929 384 aa11.03□□□□□ -0.64
LINC01840-201ENST00000421870 RBMS2Q15434 407 aaKnown RBP11.03□□□□□ -0.64
LINC01840-201ENST00000421870 CENPSQ8N2Z9 138 aa11.03□□□□□ -0.64
LINC01840-201ENST00000421870 LILRB2Q8N423 598 aa11.03□□□□□ -0.64
LINC01840-201ENST00000421870 RBKSQ9H477 322 aa11.03□□□□□ -0.64
LINC01840-201ENST00000421870 LOC102724200A0A096LPH7 203 aaPredicted RBP11.02□□□□□ -0.65
LINC01840-201ENST00000421870 IGLC1P0CG04 106 aa11.02□□□□□ -0.65
LINC01840-201ENST00000421870 VAMP1P23763 118 aa11.02□□□□□ -0.65
LINC01840-201ENST00000421870 CMC4P56277 68 aaPredicted RBP11.02□□□□□ -0.65
LINC01840-201ENST00000421870 UBE2MP61081 183 aaKnown RBP11.02□□□□□ -0.65
LINC01840-201ENST00000421870 PPP1R1AQ13522 171 aa11.02□□□□□ -0.65
LINC01840-201ENST00000421870 ODF3L2Q3SX64 289 aa11.02□□□□□ -0.65
LINC01840-201ENST00000421870 ETFRF1Q6IPR1 90 aa11.02□□□□□ -0.65
LINC01840-201ENST00000421870 DTD1Q8TEA8 209 aa11.02□□□□□ -0.65
LINC01840-201ENST00000421870 GGTLC1Q9BX51 225 aa11.02□□□□□ -0.65
LINC01840-201ENST00000421870 TMED3Q9Y3Q3 217 aa11.02□□□□□ -0.65
LINC01840-201ENST00000421870 IGHV3OR16-13A0A075B7E8 117 aa11.01□□□□□ -0.65
LINC01840-201ENST00000421870 IGHV3-74A0A0B4J1X5 117 aa11.01□□□□□ -0.65
LINC01840-201ENST00000421870 SCGB2A1O75556 95 aa11.01□□□□□ -0.65
LINC01840-201ENST00000421870 NDUFB6O95139 128 aa11.01□□□□□ -0.65
LINC01840-201ENST00000421870 NPPCP23582 126 aa11.01□□□□□ -0.65
LINC01840-201ENST00000421870 CRYBB3P26998 211 aa11.01□□□□□ -0.65
LINC01840-201ENST00000421870 BMI1P35226 326 aa11.01□□□□□ -0.65
LINC01840-201ENST00000421870 INPP1P49441 399 aa11.01□□□□□ -0.65
LINC01840-201ENST00000421870 YPEL3P61236 119 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms