RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 UQCRFS1P47985 274 aa13.6□□□□□ -0.23
PKP4-204ENST00000421462 TBR1Q16650 682 aa13.6□□□□□ -0.23
PKP4-204ENST00000421462 TMEM105Q8N8V8 129 aa13.6□□□□□ -0.23
PKP4-204ENST00000421462 OR4S2Q8NH73 311 aa13.6□□□□□ -0.23
PKP4-204ENST00000421462 KLF13Q9Y2Y9 288 aaPredicted RBP13.6□□□□□ -0.23
PKP4-204ENST00000421462 APOA2P02652 100 aa13.6□□□□□ -0.23
PKP4-204ENST00000421462 PNKDQ8N490 385 aa13.6□□□□□ -0.23
PKP4-204ENST00000421462 IGF2BP2-AS1Q96M15 143 aa13.6□□□□□ -0.23
PKP4-204ENST00000421462 IFI27L2Q9H2X8 130 aa13.6□□□□□ -0.23
PKP4-204ENST00000421462 MRPL27Q9P0M9 148 aaKnown RBP13.6□□□□□ -0.23
PKP4-204ENST00000421462 IQCF6A8MYZ5 107 aa13.59□□□□□ -0.23
PKP4-204ENST00000421462 HSBP1L1C9JCN9 74 aa13.59□□□□□ -0.23
PKP4-204ENST00000421462 C8orf88P0DMB2 117 aa13.59□□□□□ -0.23
PKP4-204ENST00000421462 MEOX1P50221 254 aa13.59□□□□□ -0.23
PKP4-204ENST00000421462 DEFB108BQ8NET1 73 aa13.59□□□□□ -0.23
PKP4-204ENST00000421462 VWC2LB2RUY7 222 aa13.59□□□□□ -0.23
PKP4-204ENST00000421462 K7ESF4 209 aa13.59□□□□□ -0.23
PKP4-204ENST00000421462 LEPROTL1O95214 131 aa13.59□□□□□ -0.23
PKP4-204ENST00000421462 SSBP2P81877 361 aaPredicted RBP13.59□□□□□ -0.23
PKP4-204ENST00000421462 PGLYRP4Q96LB8 373 aa13.59□□□□□ -0.23
PKP4-204ENST00000421462 CXXC4Q9H2H0 198 aa13.59□□□□□ -0.23
PKP4-204ENST00000421462 SAA2P0DJI9 122 aaPredicted RBP13.58□□□□□ -0.23
PKP4-204ENST00000421462 SLC25A34Q6PIV7 304 aa13.58□□□□□ -0.23
PKP4-204ENST00000421462 C6orf15Q6UXA7 325 aaPredicted RBP13.58□□□□□ -0.23
PKP4-204ENST00000421462 SMIM15Q7Z3B0 74 aa13.58□□□□□ -0.23
PKP4-204ENST00000421462 IDI2-AS1Q9NZ38 188 aa13.58□□□□□ -0.23
PKP4-204ENST00000421462 ABI3Q9P2A4 366 aa13.58□□□□□ -0.23
PKP4-204ENST00000421462 IGHV1-2P23083 117 aa13.58□□□□□ -0.24
PKP4-204ENST00000421462 OR2V2Q96R30 315 aa13.58□□□□□ -0.24
PKP4-204ENST00000421462 SLC25A33Q9BSK2 321 aa13.58□□□□□ -0.24
PKP4-204ENST00000421462 REG1AP05451 166 aa13.58□□□□□ -0.24
PKP4-204ENST00000421462 SSPNQ14714 243 aa13.58□□□□□ -0.24
PKP4-204ENST00000421462 LRRC10Q5BKY1 277 aa13.58□□□□□ -0.24
PKP4-204ENST00000421462 BVES-AS1Q5T3Y7 98 aa13.58□□□□□ -0.24
PKP4-204ENST00000421462 CORO2AQ92828 525 aa13.58□□□□□ -0.24
PKP4-204ENST00000421462 IGKV1-16P04430 117 aa13.57□□□□□ -0.24
PKP4-204ENST00000421462 PSG9Q00887 426 aa13.57□□□□□ -0.24
PKP4-204ENST00000421462 FOXE3Q13461 319 aa13.57□□□□□ -0.24
PKP4-204ENST00000421462 AARDQ4LEZ3 155 aa13.57□□□□□ -0.24
PKP4-204ENST00000421462 URB1-AS1Q96HZ7 61 aa13.57□□□□□ -0.24
PKP4-204ENST00000421462 SLC25A10Q9UBX3 287 aaPredicted RBP13.57□□□□□ -0.24
PKP4-204ENST00000421462 SAP30O75446 220 aa13.57□□□□□ -0.24
PKP4-204ENST00000421462 MAFAQ8NHW3 353 aaPredicted RBP13.57□□□□□ -0.24
PKP4-204ENST00000421462 TRAV8-6A0A0B4J262 113 aa13.56□□□□□ -0.24
PKP4-204ENST00000421462 GAGE12BA1L429 117 aa13.56□□□□□ -0.24
PKP4-204ENST00000421462 CT45A1Q5HYN5 189 aa13.56□□□□□ -0.24
PKP4-204ENST00000421462 DUX4L9Q6RFH8 374 aaPredicted RBP13.56□□□□□ -0.24
PKP4-204ENST00000421462 CT45A3Q8NHU0 189 aa13.56□□□□□ -0.24
PKP4-204ENST00000421462 PCSK5Q92824 1860 aa13.56□□□□□ -0.24
PKP4-204ENST00000421462 IGKV1D-17A0A075B6S4 117 aa13.56□□□□□ -0.24
PKP4-204ENST00000421462 PPIAL4DF5H284 164 aa13.56□□□□□ -0.24
PKP4-204ENST00000421462 SYS1-DBNDD2H3BUS1 97 aa13.56□□□□□ -0.24
PKP4-204ENST00000421462 COX7A2P2O60397 106 aa13.56□□□□□ -0.24
PKP4-204ENST00000421462 HOXC12P31275 282 aa13.56□□□□□ -0.24
PKP4-204ENST00000421462 CACNA1GO43497 2377 aa13.56□□□□□ -0.24
PKP4-204ENST00000421462 IGHV1-24A0A0C4DH33 117 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 TNFSF15O95150 251 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 SPRNQ5BIV9 151 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 MEGF9Q9H1U4 602 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 POLEQ07864 2286 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 A0A1W2PRE2 83 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 PAXXQ9BUH6 204 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 CALYQ9NYX4 217 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 TRGV8A0A0C4DH27 118 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 PEX7O00628 323 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 SLC25A5P05141 298 aaKnown RBP13.55□□□□□ -0.24
PKP4-204ENST00000421462 APELAP0DMC3 54 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 LOXL3P58215 753 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 WFDC8Q8IUA0 241 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 GRAMD2BQ96HH9 432 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 SLC25A2Q9BXI2 301 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 TMEM14BQ9NUH8 114 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 JPT1Q9UK76 154 aa13.55□□□□□ -0.24
PKP4-204ENST00000421462 DSCAMO60469 2012 aa13.54□□□□□ -0.24
PKP4-204ENST00000421462 PKDREJQ9NTG1 2253 aa13.54□□□□□ -0.24
PKP4-204ENST00000421462 SRRM4A7MD48 611 aaKnown RBP13.54□□□□□ -0.24
PKP4-204ENST00000421462 ORM2P19652 201 aa13.54□□□□□ -0.24
PKP4-204ENST00000421462 ASCL2Q99929 193 aa13.54□□□□□ -0.24
PKP4-204ENST00000421462 COMMD5Q9GZQ3 224 aa13.54□□□□□ -0.24
PKP4-204ENST00000421462 FNDC4Q9H6D8 234 aaPredicted RBP13.54□□□□□ -0.24
PKP4-204ENST00000421462 IGHV3-21A0A0B4J1V1 117 aa13.53□□□□□ -0.24
PKP4-204ENST00000421462 WISP2O76076 250 aa13.53□□□□□ -0.24
PKP4-204ENST00000421462 REG1BP48304 166 aa13.53□□□□□ -0.24
PKP4-204ENST00000421462 TMEM116Q8NCL8 245 aa13.53□□□□□ -0.24
PKP4-204ENST00000421462 SARAFQ96BY9 339 aa13.53□□□□□ -0.24
PKP4-204ENST00000421462 ZPBPQ9BS86 351 aa13.53□□□□□ -0.24
PKP4-204ENST00000421462 GSX1Q9H4S2 264 aaPredicted RBP13.53□□□□□ -0.24
PKP4-204ENST00000421462 C21orf140B9A014 251 aa13.53□□□□□ -0.24
PKP4-204ENST00000421462 NTN3O00634 580 aaPredicted RBP13.53□□□□□ -0.24
PKP4-204ENST00000421462 RNFT1Q5M7Z0 435 aa13.53□□□□□ -0.24
PKP4-204ENST00000421462 TMEM191AQ9H0A3 160 aa13.53□□□□□ -0.24
PKP4-204ENST00000421462 SPRR3Q9UBC9 169 aa13.53□□□□□ -0.24
PKP4-204ENST00000421462 FAM90A9PA6NNJ1 464 aa13.53□□□□□ -0.24
PKP4-204ENST00000421462 LINC00322Q6ZN03 302 aaPredicted RBP13.53□□□□□ -0.24
PKP4-204ENST00000421462 MOGAT3Q86VF5 341 aa13.53□□□□□ -0.24
PKP4-204ENST00000421462 FAM90A1Q86YD7 464 aa13.53□□□□□ -0.24
PKP4-204ENST00000421462 PILRBQ9UKJ0 227 aa13.53□□□□□ -0.24
PKP4-204ENST00000421462 FOXA2Q9Y261 457 aaPredicted RBP13.53□□□□□ -0.24
PKP4-204ENST00000421462 PGPA6NDG6 321 aa13.52□□□□□ -0.24
PKP4-204ENST00000421462 HIST1H1EP10412 219 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms