RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 GNG7O60262 68 aa13.8□□□□□ -0.2
ECHDC3-202ENST00000420401 PITX3O75364 302 aa13.8□□□□□ -0.2
ECHDC3-202ENST00000420401 IGHV3-48P01763 117 aa13.8□□□□□ -0.2
ECHDC3-202ENST00000420401 TCRBP04435 133 aa13.8□□□□□ -0.2
ECHDC3-202ENST00000420401 CBLN1P23435 193 aa13.8□□□□□ -0.2
ECHDC3-202ENST00000420401 OPRK1P41145 380 aa13.8□□□□□ -0.2
ECHDC3-202ENST00000420401 C2orf83Q53S99 150 aa13.8□□□□□ -0.2
ECHDC3-202ENST00000420401 UNQ9165/PRO28630Q6UXU0 137 aa13.8□□□□□ -0.2
ECHDC3-202ENST00000420401 DTD1Q8TEA8 209 aa13.8□□□□□ -0.2
ECHDC3-202ENST00000420401 MARC2Q969Z3 335 aa13.8□□□□□ -0.2
ECHDC3-202ENST00000420401 U3KQ87 197 aa13.8□□□□□ -0.2
ECHDC3-202ENST00000420401 FAM240BA0A1B0GVZ2 78 aa13.79□□□□□ -0.2
ECHDC3-202ENST00000420401 TMEM213A2RRL7 107 aa13.79□□□□□ -0.2
ECHDC3-202ENST00000420401 FAM90A26D6RGX4 464 aa13.79□□□□□ -0.2
ECHDC3-202ENST00000420401 UPK1BO75841 260 aa13.79□□□□□ -0.2
ECHDC3-202ENST00000420401 IFNA21P01568 189 aa13.79□□□□□ -0.2
ECHDC3-202ENST00000420401 ADMP35318 185 aa13.79□□□□□ -0.2
ECHDC3-202ENST00000420401 ATP5IP56385 69 aaPredicted RBP13.79□□□□□ -0.2
ECHDC3-202ENST00000420401 ASAH1Q13510 395 aa13.79□□□□□ -0.2
ECHDC3-202ENST00000420401 TM4SF20Q53R12 229 aa13.79□□□□□ -0.2
ECHDC3-202ENST00000420401 GGNBP1Q5YKI7 109 aa13.79□□□□□ -0.2
ECHDC3-202ENST00000420401 ADAMTSL5Q6ZMM2 481 aa13.79□□□□□ -0.2
ECHDC3-202ENST00000420401 RNASEH2CQ8TDP1 164 aaKnown RBP13.79□□□□□ -0.2
ECHDC3-202ENST00000420401 TMEM190Q8WZ59 177 aa13.79□□□□□ -0.2
ECHDC3-202ENST00000420401 LSM4Q9Y4Z0 139 aaKnown RBP13.79□□□□□ -0.2
ECHDC3-202ENST00000420401 SCGB2A1O75556 95 aa13.78□□□□□ -0.2
ECHDC3-202ENST00000420401 MED6O75586 246 aa13.78□□□□□ -0.2
ECHDC3-202ENST00000420401 IFNA10P01566 189 aa13.78□□□□□ -0.2
ECHDC3-202ENST00000420401 NHLRC4P0CG21 123 aaPredicted RBP13.78□□□□□ -0.2
ECHDC3-202ENST00000420401 NPY1RP25929 384 aa13.78□□□□□ -0.2
ECHDC3-202ENST00000420401 DEFB114Q30KQ6 69 aa13.78□□□□□ -0.2
ECHDC3-202ENST00000420401 UXS1Q8NBZ7 420 aa13.78□□□□□ -0.2
ECHDC3-202ENST00000420401 MRPL27Q9P0M9 148 aaKnown RBP13.78□□□□□ -0.2
ECHDC3-202ENST00000420401 TBC1D24Q9ULP9 559 aa13.78□□□□□ -0.2
ECHDC3-202ENST00000420401 U3KQK5 164 aa13.78□□□□□ -0.2
ECHDC3-202ENST00000420401 TRAV6A0A075B6T7 132 aa13.77□□□□□ -0.21
ECHDC3-202ENST00000420401 CD300EQ496F6 205 aaPredicted RBP13.77□□□□□ -0.21
ECHDC3-202ENST00000420401 ETFRF1Q6IPR1 90 aa13.77□□□□□ -0.21
ECHDC3-202ENST00000420401 OR4X1Q8NH49 305 aa13.77□□□□□ -0.21
ECHDC3-202ENST00000420401 MITD1Q8WV92 249 aa13.77□□□□□ -0.21
ECHDC3-202ENST00000420401 C20orf24Q9BUV8 137 aa13.77□□□□□ -0.21
ECHDC3-202ENST00000420401 DAZ1Q9NQZ3 744 aaKnown RBP13.77□□□□□ -0.21
ECHDC3-202ENST00000420401 NUDT15Q9NV35 164 aa13.77□□□□□ -0.21
ECHDC3-202ENST00000420401 C15orf62A8K5M9 175 aa13.76□□□□□ -0.21
ECHDC3-202ENST00000420401 C3orf84H3BNL1 204 aa13.76□□□□□ -0.21
ECHDC3-202ENST00000420401 K7EMT4 169 aa13.76□□□□□ -0.21
ECHDC3-202ENST00000420401 CLN5O75503 358 aa13.76□□□□□ -0.21
ECHDC3-202ENST00000420401 ADAP1O75689 374 aa13.76□□□□□ -0.21
ECHDC3-202ENST00000420401 YIF1AO95070 293 aa13.76□□□□□ -0.21
ECHDC3-202ENST00000420401 TMEM50AO95807 157 aa13.76□□□□□ -0.21
ECHDC3-202ENST00000420401 H2AFB2P0C5Z0 115 aa13.76□□□□□ -0.21
ECHDC3-202ENST00000420401 C8orf88P0DMB2 117 aa13.76□□□□□ -0.21
ECHDC3-202ENST00000420401 SLC25A4P12235 298 aa13.76□□□□□ -0.21
ECHDC3-202ENST00000420401 EDN2P20800 178 aa13.76□□□□□ -0.21
ECHDC3-202ENST00000420401 MLANAQ16655 118 aa13.76□□□□□ -0.21
ECHDC3-202ENST00000420401 CACNG8Q8WXS5 425 aa13.76□□□□□ -0.21
ECHDC3-202ENST00000420401 CIB3Q96Q77 187 aaPredicted RBP13.76□□□□□ -0.21
ECHDC3-202ENST00000420401 FNDC4Q9H6D8 234 aaPredicted RBP13.76□□□□□ -0.21
ECHDC3-202ENST00000420401 SMAD5-AS1Q9Y6J3 95 aa13.76□□□□□ -0.21
ECHDC3-202ENST00000420401 TRAV30A0A087WSZ9 112 aa13.75□□□□□ -0.21
ECHDC3-202ENST00000420401 IZUMO1RA6ND01 250 aa13.75□□□□□ -0.21
ECHDC3-202ENST00000420401 RPP30P78346 268 aaKnown RBP13.75□□□□□ -0.21
ECHDC3-202ENST00000420401 GTSCR1Q86UQ5 136 aa13.75□□□□□ -0.21
ECHDC3-202ENST00000420401 TMEM170AQ8WVE7 144 aa13.75□□□□□ -0.21
ECHDC3-202ENST00000420401 SORL1Q92673 2214 aa13.75□□□□□ -0.21
ECHDC3-202ENST00000420401 SYNGR2O43760 224 aa13.74□□□□□ -0.21
ECHDC3-202ENST00000420401 IFNA4P05014 189 aa13.74□□□□□ -0.21
ECHDC3-202ENST00000420401 OR52B4Q8NGK2 314 aa13.74□□□□□ -0.21
ECHDC3-202ENST00000420401 ENKURQ8TC29 256 aa13.74□□□□□ -0.21
ECHDC3-202ENST00000420401 MLXQ9UH92 298 aa13.74□□□□□ -0.21
ECHDC3-202ENST00000420401 RAB11AP62491 216 aa13.73□□□□□ -0.21
ECHDC3-202ENST00000420401 GUCA2BQ16661 112 aa13.73□□□□□ -0.21
ECHDC3-202ENST00000420401 PRSS54Q6PEW0 395 aa13.73□□□□□ -0.21
ECHDC3-202ENST00000420401 BTNL8Q6UX41 500 aa13.73□□□□□ -0.21
ECHDC3-202ENST00000420401 ZNF600Q6ZNG1 722 aa13.73□□□□□ -0.21
ECHDC3-202ENST00000420401 RBPMS2Q6ZRY4 209 aaKnown RBP13.73□□□□□ -0.21
ECHDC3-202ENST00000420401 ZNF431Q8TF32 576 aaPredicted RBP13.73□□□□□ -0.21
ECHDC3-202ENST00000420401 OR10C1Q96KK4 312 aa13.73□□□□□ -0.21
ECHDC3-202ENST00000420401 GINS3Q9BRX5 216 aa13.73□□□□□ -0.21
ECHDC3-202ENST00000420401 MAGT1Q9H0U3 335 aa13.73□□□□□ -0.21
ECHDC3-202ENST00000420401 MRPL36Q9P0J6 103 aaKnown RBP13.73□□□□□ -0.21
ECHDC3-202ENST00000420401 IGHV3OR16-8A0A075B7F1 116 aa13.72□□□□□ -0.21
ECHDC3-202ENST00000420401 TRAV25A0A0B4J276 109 aa13.72□□□□□ -0.21
ECHDC3-202ENST00000420401 ZNF785A8K8V0 405 aa13.72□□□□□ -0.21
ECHDC3-202ENST00000420401 ZNF207O43670 478 aaKnown RBP13.72□□□□□ -0.21
ECHDC3-202ENST00000420401 IAPPP10997 89 aa13.72□□□□□ -0.21
ECHDC3-202ENST00000420401 GPX4P36969 197 aaPredicted RBP13.72□□□□□ -0.21
ECHDC3-202ENST00000420401 DEFA1P59665 94 aa13.72□□□□□ -0.21
ECHDC3-202ENST00000420401 DEFA3P59666 94 aa13.72□□□□□ -0.21
ECHDC3-202ENST00000420401 TOMM20LQ6UXN7 152 aa13.72□□□□□ -0.21
ECHDC3-202ENST00000420401 TMEM116Q8NCL8 245 aa13.72□□□□□ -0.21
ECHDC3-202ENST00000420401 OR1S2Q8NGQ3 325 aa13.72□□□□□ -0.21
ECHDC3-202ENST00000420401 TRAV14DV4A0A0A6YYC5 116 aa13.71□□□□□ -0.21
ECHDC3-202ENST00000420401 MPTX1A8MV57 137 aa13.71□□□□□ -0.21
ECHDC3-202ENST00000420401 WRBO00258 174 aa13.71□□□□□ -0.21
ECHDC3-202ENST00000420401 NKX2-1P43699 371 aaPredicted RBP13.71□□□□□ -0.21
ECHDC3-202ENST00000420401 RND2P52198 227 aa13.71□□□□□ -0.21
ECHDC3-202ENST00000420401 IFITM3Q01628 133 aa13.71□□□□□ -0.21
ECHDC3-202ENST00000420401 ID3Q02535 119 aa13.71□□□□□ -0.21
ECHDC3-202ENST00000420401 IAH1Q2TAA2 248 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms