RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 PARP11Q9NR21 331 aa11.18□□□□□ -0.62
SHMT1P1-201ENST00000419974 DNAJC9-AS1A6NH13 148 aa11.17□□□□□ -0.62
SHMT1P1-201ENST00000419974 CFDP00746 253 aaPredicted RBP11.17□□□□□ -0.62
SHMT1P1-201ENST00000419974 IGLV1-40P01703 118 aa11.17□□□□□ -0.62
SHMT1P1-201ENST00000419974 REG1AP05451 166 aa11.17□□□□□ -0.62
SHMT1P1-201ENST00000419974 DEFA4P12838 97 aa11.17□□□□□ -0.62
SHMT1P1-201ENST00000419974 RAB5CP51148 216 aa11.17□□□□□ -0.62
SHMT1P1-201ENST00000419974 TEPPQ6URK8 271 aa11.17□□□□□ -0.62
SHMT1P1-201ENST00000419974 SLC16A13Q7RTY0 426 aa11.17□□□□□ -0.62
SHMT1P1-201ENST00000419974 THAP8Q8NA92 274 aa11.17□□□□□ -0.62
SHMT1P1-201ENST00000419974 NECAP1Q8NC96 275 aa11.17□□□□□ -0.62
SHMT1P1-201ENST00000419974 OR4X1Q8NH49 305 aa11.17□□□□□ -0.62
SHMT1P1-201ENST00000419974 LRRC20Q8TCA0 184 aa11.17□□□□□ -0.62
SHMT1P1-201ENST00000419974 SCGB1C1Q8TD33 95 aa11.17□□□□□ -0.62
SHMT1P1-201ENST00000419974 TXN2Q99757 166 aa11.17□□□□□ -0.62
SHMT1P1-201ENST00000419974 ZNF702PQ9H963 129 aa11.17□□□□□ -0.62
SHMT1P1-201ENST00000419974 PAIP2BQ9ULR5 123 aaKnown RBP11.17□□□□□ -0.62
SHMT1P1-201ENST00000419974 STAB1Q9NY15 2570 aa11.16□□□□□ -0.62
SHMT1P1-201ENST00000419974 UMAD1C9J7I0 102 aa11.16□□□□□ -0.62
SHMT1P1-201ENST00000419974 K7EIM0 57 aa11.16□□□□□ -0.62
SHMT1P1-201ENST00000419974 ATP6V0CP27449 155 aa11.16□□□□□ -0.62
SHMT1P1-201ENST00000419974 OPRK1P41145 380 aa11.16□□□□□ -0.62
SHMT1P1-201ENST00000419974 SLC25A24Q6NUK1 477 aa11.16□□□□□ -0.62
SHMT1P1-201ENST00000419974 ESM1Q9NQ30 184 aa11.16□□□□□ -0.62
SHMT1P1-201ENST00000419974 KCNIP2Q9NS61 270 aa11.16□□□□□ -0.62
SHMT1P1-201ENST00000419974 FAM223BA6NKX1 122 aa11.15□□□□□ -0.62
SHMT1P1-201ENST00000419974 MT-CO2P00403 227 aa11.15□□□□□ -0.62
SHMT1P1-201ENST00000419974 IGHG4P01861 327 aa11.15□□□□□ -0.62
SHMT1P1-201ENST00000419974 RAB31Q13636 194 aa11.15□□□□□ -0.62
SHMT1P1-201ENST00000419974 Q6ZS46 218 aa11.15□□□□□ -0.62
SHMT1P1-201ENST00000419974 FAM223AQ8IWN6 122 aa11.15□□□□□ -0.62
SHMT1P1-201ENST00000419974 RNF152Q8N8N0 203 aa11.15□□□□□ -0.62
SHMT1P1-201ENST00000419974 SLC35E1Q96K37 410 aa11.15□□□□□ -0.62
SHMT1P1-201ENST00000419974 CXorf58Q96LI9 332 aa11.15□□□□□ -0.62
SHMT1P1-201ENST00000419974 NPCDR1Q9BY65 106 aa11.15□□□□□ -0.62
SHMT1P1-201ENST00000419974 SLC25A32Q9H2D1 315 aa11.15□□□□□ -0.62
SHMT1P1-201ENST00000419974 UBQLN2Q9UHD9 624 aa11.15□□□□□ -0.62
SHMT1P1-201ENST00000419974 PLXNB1O43157 2135 aa11.15□□□□□ -0.62
SHMT1P1-201ENST00000419974 UBE2L5PA0A1B0GUS4 154 aa11.14□□□□□ -0.63
SHMT1P1-201ENST00000419974 SH2D7A6NKC9 451 aaPredicted RBP11.14□□□□□ -0.63
SHMT1P1-201ENST00000419974 C17orf112F2Z3M2 114 aa11.14□□□□□ -0.63
SHMT1P1-201ENST00000419974 G3V318 75 aa11.14□□□□□ -0.63
SHMT1P1-201ENST00000419974 RPL29P47914 159 aaKnown RBP11.14□□□□□ -0.63
SHMT1P1-201ENST00000419974 SULT1A2P50226 295 aa11.14□□□□□ -0.63
SHMT1P1-201ENST00000419974 FAM209BQ5JX69 171 aa11.14□□□□□ -0.63
SHMT1P1-201ENST00000419974 BTNL8Q6UX41 500 aa11.14□□□□□ -0.63
SHMT1P1-201ENST00000419974 DPPA3Q6W0C5 159 aa11.14□□□□□ -0.63
SHMT1P1-201ENST00000419974 RNF141Q8WVD5 230 aa11.14□□□□□ -0.63
SHMT1P1-201ENST00000419974 MISP3Q96FF7 219 aa11.14□□□□□ -0.63
SHMT1P1-201ENST00000419974 USMG5Q96IX5 58 aa11.14□□□□□ -0.63
SHMT1P1-201ENST00000419974 C16orf95Q9H693 158 aa11.14□□□□□ -0.63
SHMT1P1-201ENST00000419974 GAR1Q9NY12 217 aaKnown RBP11.14□□□□□ -0.63
SHMT1P1-201ENST00000419974 IGKV1OR2-108A0A075B7D4 117 aa11.13□□□□□ -0.63
SHMT1P1-201ENST00000419974 TRAV30A0A087WSZ9 112 aa11.13□□□□□ -0.63
SHMT1P1-201ENST00000419974 MBP02144 154 aa11.13□□□□□ -0.63
SHMT1P1-201ENST00000419974 APELAP0DMC3 54 aa11.13□□□□□ -0.63
SHMT1P1-201ENST00000419974 SELENOTP62341 195 aa11.13□□□□□ -0.63
SHMT1P1-201ENST00000419974 PRR20EP86478 221 aa11.13□□□□□ -0.63
SHMT1P1-201ENST00000419974 PRR20CP86479 221 aa11.13□□□□□ -0.63
SHMT1P1-201ENST00000419974 PRR20DP86480 221 aa11.13□□□□□ -0.63
SHMT1P1-201ENST00000419974 PRR20BP86481 221 aa11.13□□□□□ -0.63
SHMT1P1-201ENST00000419974 PRR20AP86496 221 aa11.13□□□□□ -0.63
SHMT1P1-201ENST00000419974 MLANAQ16655 118 aa11.13□□□□□ -0.63
SHMT1P1-201ENST00000419974 ECSCRQ19T08 205 aa11.13□□□□□ -0.63
SHMT1P1-201ENST00000419974 COMMD1Q8N668 190 aa11.13□□□□□ -0.63
SHMT1P1-201ENST00000419974 OR5T1Q8NG75 326 aa11.13□□□□□ -0.63
SHMT1P1-201ENST00000419974 SAT2Q96F10 170 aaPredicted RBP11.13□□□□□ -0.63
SHMT1P1-201ENST00000419974 TRGV9Q99603 122 aa11.13□□□□□ -0.63
SHMT1P1-201ENST00000419974 IGKV1D-37A0A075B6S9 117 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 TRBV7-1A0A0A6YYK4 115 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 CLN5O75503 358 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 NDUFA7O95182 113 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 ELANEP08246 267 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 FGF7P21781 194 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 PSMB8P28062 276 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 NPBWR1P48145 328 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 C9orf152Q5JTZ5 239 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 ZNF709Q8N972 641 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 HSD17B11Q8NBQ5 300 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 OR2T6Q8NHC8 308 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 TMED6Q8WW62 240 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 NPIPB3Q92617 1050 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 MGST2Q99735 147 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 C19orf24Q9BVV8 132 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 GGTLC1Q9BX51 225 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 SERTAD4Q9NUC0 356 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 FBXL7Q9UJT9 491 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 SLC45A2Q9UMX9 530 aa11.12□□□□□ -0.63
SHMT1P1-201ENST00000419974 TCRBV4S1A1TA0A5B7 111 aa11.11□□□□□ -0.63
SHMT1P1-201ENST00000419974 FAM181BA6NEQ2 426 aa11.11□□□□□ -0.63
SHMT1P1-201ENST00000419974 AGPAT2O15120 278 aa11.11□□□□□ -0.63
SHMT1P1-201ENST00000419974 CAMLGP49069 296 aa11.11□□□□□ -0.63
SHMT1P1-201ENST00000419974 MFAP4P55083 255 aa11.11□□□□□ -0.63
SHMT1P1-201ENST00000419974 AKR1C1Q04828 323 aa11.11□□□□□ -0.63
SHMT1P1-201ENST00000419974 FOXE3Q13461 319 aa11.11□□□□□ -0.63
SHMT1P1-201ENST00000419974 CLLU1Q5K131 121 aa11.11□□□□□ -0.63
SHMT1P1-201ENST00000419974 PXDC1Q5TGL8 231 aa11.11□□□□□ -0.63
SHMT1P1-201ENST00000419974 ALKAL2Q6UX46 152 aa11.11□□□□□ -0.63
SHMT1P1-201ENST00000419974 C19orf35Q6ZS72 473 aa11.11□□□□□ -0.63
SHMT1P1-201ENST00000419974 MYOZ3Q8TDC0 251 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms