RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 RSL24D1Q9UHA3 163 aaKnown RBP5.25□□□□□ -1.57
HMGN1-205ENST00000419378 PRNDQ9UKY0 176 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 OR51B2Q9Y5P1 312 aa5.25□□□□□ -1.57
HMGN1-205ENST00000419378 STAB2Q8WWQ8 2551 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 C3orf85A0A1B0GTC6 90 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 ANKRD20A5PA0PJZ0 165 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 FABP12A6NFH5 140 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 DISC1C4P0D8 188 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 GGCTO75223 188 aaKnown RBP5.24□□□□□ -1.57
HMGN1-205ENST00000419378 SCGB1D1O95968 90 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 IGKV1-5P01602 117 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 CTSDP07339 412 aaPredicted RBP5.24□□□□□ -1.57
HMGN1-205ENST00000419378 CSN3P07498 182 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 AKAIN1P0CW23 69 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 ARL3P36405 182 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 MFAP2P55001 183 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 RBMS2Q15434 407 aaKnown RBP5.24□□□□□ -1.57
HMGN1-205ENST00000419378 SURF2Q15527 256 aaPredicted RBP5.24□□□□□ -1.57
HMGN1-205ENST00000419378 TRIM16LQ309B1 348 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 C11orf87Q6NUJ2 197 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 CLEC19AQ6UXS0 136 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 H2BFWTQ7Z2G1 175 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 ZNF502Q8TBZ5 544 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 ZFAND1Q8TCF1 268 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 CXorf58Q96LI9 332 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 PRRT1Q99946 306 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 SOSTQ9BQB4 213 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 FKBP11Q9NYL4 201 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 SIGLEC8Q9NYZ4 499 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 THYN1Q9P016 225 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 COPZ2Q9P299 210 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 F11RQ9Y624 299 aaKnown RBP5.24□□□□□ -1.57
HMGN1-205ENST00000419378 V9GYH0 126 aa5.24□□□□□ -1.57
HMGN1-205ENST00000419378 TRBV7-1A0A0A6YYK4 115 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 ZNF701M0R085 212 aaPredicted RBP5.23□□□□□ -1.57
HMGN1-205ENST00000419378 CYB5BO43169 146 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 OR2C1O95371 312 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 P0C879 139 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 UCP1P25874 307 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 GPR183P32249 361 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 AKR1C2P52895 323 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 HSPE1P61604 102 aaKnown RBP5.23□□□□□ -1.57
HMGN1-205ENST00000419378 PRCDQ00LT1 54 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 IZUMO4Q1ZYL8 232 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 SP6Q3SY56 376 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 LCN12Q6JVE5 192 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 ADAMTSL5Q6ZMM2 481 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 GPHB5Q86YW7 130 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 OR51S1Q8NGJ8 323 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 OR4A16Q8NH70 328 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 VN1R17PQ8TDU5 208 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 TMEM56Q96MV1 263 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 RTBDNQ9BSG5 229 aaPredicted RBP5.23□□□□□ -1.57
HMGN1-205ENST00000419378 C5orf66Q9H5L9 145 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 ZC4H2Q9NQZ6 224 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 SLC2A8Q9NY64 477 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 C14orf166Q9Y224 244 aaKnown RBP5.23□□□□□ -1.57
HMGN1-205ENST00000419378 SMAD5-AS1Q9Y6J3 95 aa5.23□□□□□ -1.57
HMGN1-205ENST00000419378 KMT2CQ8NEZ4 4911 aaKnown RBP5.23□□□□□ -1.57
HMGN1-205ENST00000419378 IGHV3-21A0A0B4J1V1 117 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 A0A0G2JRQ6 117 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 IZUMO1RA6ND01 250 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 CRYM-AS1A6NIL9 109 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 C2orf70A6NJV1 201 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 A8MWP6 167 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 LGALS9O00182 355 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 TGOLN2O43493 480 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 B3GALNT1O75752 331 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 ATG12O94817 140 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 OR5AC1P0C628 307 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 KLF9Q13886 244 aaPredicted RBP5.22□□□□□ -1.57
HMGN1-205ENST00000419378 ZNF79Q15937 498 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 PYDC2Q56P42 97 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 SPINK9Q5DT21 86 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 SLC25A24Q6NUK1 477 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 Q8N402 240 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 ZNF114Q8NC26 417 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 OR1L6Q8NGR2 347 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 OR1P1Q8NH06 330 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 LHFPL5Q8TAF8 219 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 MPLKIPQ8TAP9 179 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 SCARB1Q8WTV0 552 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 CACNG8Q8WXS5 425 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 TMEM222Q9H0R3 208 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 NAA60Q9H7X0 242 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 PLEKHA3Q9HB20 300 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 MCUBQ9NWR8 336 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 GPR132Q9UNW8 380 aa5.22□□□□□ -1.57
HMGN1-205ENST00000419378 TENM3Q9P273 2699 aa5.21□□□□□ -1.57
HMGN1-205ENST00000419378 A0A0B4J293 547 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 IGHV3-35A0A0C4DH35 117 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 TEX13DA0A0J9YY54 714 aaPredicted RBP5.21□□□□□ -1.58
HMGN1-205ENST00000419378 ZNF320A2RRD8 509 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 TMEM213A2RRL7 107 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 OR2T8A6NH00 312 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 K7EIM0 57 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 ST8SIA3O43173 380 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 CDS2O95674 445 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 FRMD6-AS1P0C7T7 363 aa5.21□□□□□ -1.58
HMGN1-205ENST00000419378 IGHV4-30-4P0DP06 118 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms