RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 TMPRSS5Q9H3S3 457 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 FUT9Q9Y231 359 aa13.34□□□□□ -0.27
SSBP3-205ENST00000417664 LRRK2Q5S007 2527 aa13.33□□□□□ -0.28
SSBP3-205ENST00000417664 NPIPB5A8MRT5 1133 aa13.33□□□□□ -0.28
SSBP3-205ENST00000417664 HLA-DRB1P01911 266 aa13.33□□□□□ -0.28
SSBP3-205ENST00000417664 DEFA4P12838 97 aa13.33□□□□□ -0.28
SSBP3-205ENST00000417664 TAS2R45P59539 299 aa13.33□□□□□ -0.28
SSBP3-205ENST00000417664 FAM78BQ5VT40 261 aa13.33□□□□□ -0.28
SSBP3-205ENST00000417664 IQCF2Q8IXL9 164 aa13.33□□□□□ -0.28
SSBP3-205ENST00000417664 LRRC75A-AS1Q8N1F1 130 aa13.33□□□□□ -0.28
SSBP3-205ENST00000417664 OR1L4Q8NGR5 311 aa13.33□□□□□ -0.28
SSBP3-205ENST00000417664 NRGNQ92686 78 aa13.33□□□□□ -0.28
SSBP3-205ENST00000417664 SEPSECSQ9HD40 501 aaKnown RBP13.33□□□□□ -0.28
SSBP3-205ENST00000417664 ARL2-SNX15V9GYD0 113 aa13.33□□□□□ -0.28
SSBP3-205ENST00000417664 SPG11Q96JI7 2443 aa13.33□□□□□ -0.28
SSBP3-205ENST00000417664 CLN5O75503 358 aa13.32□□□□□ -0.28
SSBP3-205ENST00000417664 ARL14EPLP0DKL9 152 aa13.32□□□□□ -0.28
SSBP3-205ENST00000417664 CD81P60033 236 aa13.32□□□□□ -0.28
SSBP3-205ENST00000417664 FAM74A3Q4VXF1 159 aa13.32□□□□□ -0.28
SSBP3-205ENST00000417664 FAM90A2PQ658T7 463 aa13.32□□□□□ -0.28
SSBP3-205ENST00000417664 PQLC2Q6ZP29 291 aa13.32□□□□□ -0.28
SSBP3-205ENST00000417664 Q8N9W7 124 aa13.32□□□□□ -0.28
SSBP3-205ENST00000417664 MEGF9Q9H1U4 602 aa13.32□□□□□ -0.28
SSBP3-205ENST00000417664 TECRQ9NZ01 308 aaKnown RBP13.32□□□□□ -0.28
SSBP3-205ENST00000417664 IGKV1D-37A0A075B6S9 117 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 H3BQ15 152 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 M0R036 132 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 PDE6DO43924 150 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 PAGE4O60829 102 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 EIF3GO75821 320 aaKnown RBP eCLIP13.31□□□□□ -0.28
SSBP3-205ENST00000417664 BPIFB3P59826 476 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 PNRC1Q12796 327 aaPredicted RBP13.31□□□□□ -0.28
SSBP3-205ENST00000417664 AWAT1Q58HT5 328 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 TTC9CQ8N5M4 171 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.31□□□□□ -0.28
SSBP3-205ENST00000417664 TVP23CQ96ET8 276 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 RASL11BQ9BPW5 248 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 DNAJC4Q9NNZ3 241 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 TNFRSF19Q9NS68 423 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 ELOA3CA0A087WX78 387 aaPredicted RBP13.31□□□□□ -0.28
SSBP3-205ENST00000417664 PSMB11A5LHX3 300 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 FAM74A7A6NL05 159 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 I3L2K1 104 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 APELAP0DMC3 54 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 CEBPGP53567 150 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 FBLN7Q53RD9 439 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 OR4X1Q8NH49 305 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 C7orf69Q9H7B7 122 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 SMCO4Q9NRQ5 59 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 TMEM167BQ9NRX6 74 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 DMRT1Q9Y5R6 373 aa13.31□□□□□ -0.28
SSBP3-205ENST00000417664 PUS1Q9Y606 427 aaKnown RBP eCLIP13.31□□□□□ -0.28
SSBP3-205ENST00000417664 TRAV40A0A0B4J280 105 aa13.3□□□□□ -0.28
SSBP3-205ENST00000417664 C7orf77A4D0Y5 90 aa13.3□□□□□ -0.28
SSBP3-205ENST00000417664 GCHFRP30047 84 aa13.3□□□□□ -0.28
SSBP3-205ENST00000417664 TUBA4BQ9H853 241 aa13.3□□□□□ -0.28
SSBP3-205ENST00000417664 MRPL36Q9P0J6 103 aaKnown RBP13.3□□□□□ -0.28
SSBP3-205ENST00000417664 ABCA2Q9BZC7 2435 aa13.3□□□□□ -0.28
SSBP3-205ENST00000417664 B4DEV8 164 aa13.29□□□□□ -0.28
SSBP3-205ENST00000417664 C11orf94C9JXX5 98 aa13.29□□□□□ -0.28
SSBP3-205ENST00000417664 GATA2P23769 480 aaPredicted RBP13.29□□□□□ -0.28
SSBP3-205ENST00000417664 FAM120AOSQ5T036 256 aa13.29□□□□□ -0.28
SSBP3-205ENST00000417664 LINC01356Q8N9X3 169 aa13.29□□□□□ -0.28
SSBP3-205ENST00000417664 OR4F5Q8NH21 305 aa13.29□□□□□ -0.28
SSBP3-205ENST00000417664 TMEM68Q96MH6 324 aa13.29□□□□□ -0.28
SSBP3-205ENST00000417664 OR4F4Q96R69 305 aa13.29□□□□□ -0.28
SSBP3-205ENST00000417664 RPS10P5Q9NQ39 176 aa13.29□□□□□ -0.28
SSBP3-205ENST00000417664 HIF1ANQ9NWT6 349 aa13.29□□□□□ -0.28
SSBP3-205ENST00000417664 THYN1Q9P016 225 aa13.29□□□□□ -0.28
SSBP3-205ENST00000417664 A0A096LNT2 108 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 IGHV7-81A0A0B4J1V7 117 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 F6UZH7 168 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 J3QLI3 93 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 COX7A2P2O60397 106 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 FABP1P07148 127 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 C8orf88P0DMB2 117 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 PLP1P60201 277 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 LOXL1Q08397 574 aaPredicted RBP13.28□□□□□ -0.28
SSBP3-205ENST00000417664 MIR17HGQ75NE6 70 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 TMEM37Q8WXS4 190 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 A0A087WWC5 75 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 J3QKU1 62 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 IGHV3-48P01763 117 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 ZNF90Q03938 601 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 DEFB113Q30KQ7 82 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 C10orf113Q5VZT2 155 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 SPATA31B1PQ5VZV4 182 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 TMEM88Q6PEY1 159 aa13.28□□□□□ -0.28
SSBP3-205ENST00000417664 FAM103A1Q9BTL3 118 aaKnown RBP13.28□□□□□ -0.28
SSBP3-205ENST00000417664 IGLV11-55A0A075B6I3 123 aa13.27□□□□□ -0.29
SSBP3-205ENST00000417664 ZNF727A8MUV8 499 aa13.27□□□□□ -0.29
SSBP3-205ENST00000417664 K7EIM0 57 aa13.27□□□□□ -0.29
SSBP3-205ENST00000417664 NUPL2O15504 423 aaKnown RBP13.27□□□□□ -0.29
SSBP3-205ENST00000417664 NDPQ00604 133 aa13.27□□□□□ -0.29
SSBP3-205ENST00000417664 ASPHD1Q5U4P2 390 aa13.27□□□□□ -0.29
SSBP3-205ENST00000417664 C19orf35Q6ZS72 473 aa13.27□□□□□ -0.29
SSBP3-205ENST00000417664 CBLN2Q8IUK8 224 aa13.27□□□□□ -0.29
SSBP3-205ENST00000417664 SGMS2Q8NHU3 365 aa13.27□□□□□ -0.29
SSBP3-205ENST00000417664 ZNF48Q96MX3 618 aaPredicted RBP13.27□□□□□ -0.29
SSBP3-205ENST00000417664 RBM14Q96PK6 669 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms