RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 SSBP1Q04837 148 aaKnown RBP11.14□□□□□ -0.63
UBXN4-203ENST00000416538 LAMTOR1Q6IAA8 161 aa11.14□□□□□ -0.63
UBXN4-203ENST00000416538 WFDC3Q8IUB2 231 aa11.14□□□□□ -0.63
UBXN4-203ENST00000416538 SELENOHQ8IZQ5 122 aaKnown RBP11.14□□□□□ -0.63
UBXN4-203ENST00000416538 FAM24BQ8N5W8 94 aa11.14□□□□□ -0.63
UBXN4-203ENST00000416538 RAB2BQ8WUD1 216 aa11.14□□□□□ -0.63
UBXN4-203ENST00000416538 TMEM170AQ8WVE7 144 aa11.14□□□□□ -0.63
UBXN4-203ENST00000416538 DIRAS2Q96HU8 199 aa11.14□□□□□ -0.63
UBXN4-203ENST00000416538 SLIRPQ9GZT3 109 aaKnown RBP11.14□□□□□ -0.63
UBXN4-203ENST00000416538 VSIRQ9H7M9 311 aa11.14□□□□□ -0.63
UBXN4-203ENST00000416538 MAP6D1Q9H9H5 199 aa11.14□□□□□ -0.63
UBXN4-203ENST00000416538 PUS1Q9Y606 427 aaKnown RBP eCLIP11.14□□□□□ -0.63
UBXN4-203ENST00000416538 CRYM-AS1A6NIL9 109 aa11.13□□□□□ -0.63
UBXN4-203ENST00000416538 H3BMQ9 156 aa11.13□□□□□ -0.63
UBXN4-203ENST00000416538 TMEM50AO95807 157 aa11.13□□□□□ -0.63
UBXN4-203ENST00000416538 IL18Q14116 193 aa11.13□□□□□ -0.63
UBXN4-203ENST00000416538 MEF2DQ14814 521 aa11.13□□□□□ -0.63
UBXN4-203ENST00000416538 Q6ZWC4 215 aa11.13□□□□□ -0.63
UBXN4-203ENST00000416538 GBGT1Q8N5D6 347 aa11.13□□□□□ -0.63
UBXN4-203ENST00000416538 OR51S1Q8NGJ8 323 aa11.13□□□□□ -0.63
UBXN4-203ENST00000416538 IL17DQ8TAD2 202 aa11.13□□□□□ -0.63
UBXN4-203ENST00000416538 CACNG5Q9UF02 275 aa11.13□□□□□ -0.63
UBXN4-203ENST00000416538 GPR132Q9UNW8 380 aa11.13□□□□□ -0.63
UBXN4-203ENST00000416538 TRAV14DV4A0A0A6YYC5 116 aa11.12□□□□□ -0.63
UBXN4-203ENST00000416538 ANKRD20A5PA0PJZ0 165 aa11.12□□□□□ -0.63
UBXN4-203ENST00000416538 SPRY2O43597 315 aa11.12□□□□□ -0.63
UBXN4-203ENST00000416538 IGKV1-17P01599 117 aa11.12□□□□□ -0.63
UBXN4-203ENST00000416538 AKAIN1P0CW23 69 aa11.12□□□□□ -0.63
UBXN4-203ENST00000416538 SNCAP37840 140 aa11.12□□□□□ -0.63
UBXN4-203ENST00000416538 APOC4P55056 127 aa11.12□□□□□ -0.63
UBXN4-203ENST00000416538 ZNF600Q6ZNG1 722 aa11.12□□□□□ -0.63
UBXN4-203ENST00000416538 TCF24Q7RTU0 167 aa11.12□□□□□ -0.63
UBXN4-203ENST00000416538 LYG2Q86SG7 212 aa11.12□□□□□ -0.63
UBXN4-203ENST00000416538 DUSP18Q8NEJ0 188 aa11.12□□□□□ -0.63
UBXN4-203ENST00000416538 RNASE11Q8TAA1 199 aaKnown RBP11.12□□□□□ -0.63
UBXN4-203ENST00000416538 RBPMSQ93062 196 aaKnown RBP11.12□□□□□ -0.63
UBXN4-203ENST00000416538 GPR146Q96CH1 333 aa11.12□□□□□ -0.63
UBXN4-203ENST00000416538 RRNAD1Q96FB5 475 aaKnown RBP11.12□□□□□ -0.63
UBXN4-203ENST00000416538 SOSTQ9BQB4 213 aa11.12□□□□□ -0.63
UBXN4-203ENST00000416538 C14orf166Q9Y224 244 aaKnown RBP11.12□□□□□ -0.63
UBXN4-203ENST00000416538 TP53TG1Q9Y2A0 90 aa11.12□□□□□ -0.63
UBXN4-203ENST00000416538 KIR2DL5BA0A0G2JN68 375 aa11.11□□□□□ -0.63
UBXN4-203ENST00000416538 KIR2DL5BA0A0G2JPC4 375 aa11.11□□□□□ -0.63
UBXN4-203ENST00000416538 TEX13DA0A0J9YY54 714 aaPredicted RBP11.11□□□□□ -0.63
UBXN4-203ENST00000416538 GSTZ1O43708 216 aaPredicted RBP11.11□□□□□ -0.63
UBXN4-203ENST00000416538 NXPH3O95157 252 aa11.11□□□□□ -0.63
UBXN4-203ENST00000416538 OPRK1P41145 380 aa11.11□□□□□ -0.63
UBXN4-203ENST00000416538 NPBWR1P48145 328 aa11.11□□□□□ -0.63
UBXN4-203ENST00000416538 TMBIM6P55061 237 aa11.11□□□□□ -0.63
UBXN4-203ENST00000416538 PMS2P11Q13670 270 aa11.11□□□□□ -0.63
UBXN4-203ENST00000416538 SURF2Q15527 256 aaPredicted RBP11.11□□□□□ -0.63
UBXN4-203ENST00000416538 TMEM268Q5VZI3 342 aa11.11□□□□□ -0.63
UBXN4-203ENST00000416538 KIR2DL5AQ8N109 375 aa11.11□□□□□ -0.63
UBXN4-203ENST00000416538 KIR2DL5BQ8NHK3 375 aa11.11□□□□□ -0.63
UBXN4-203ENST00000416538 RNF183Q96D59 192 aa11.11□□□□□ -0.63
UBXN4-203ENST00000416538 GALNT14Q96FL9 552 aa11.11□□□□□ -0.63
UBXN4-203ENST00000416538 PDCD10Q9BUL8 212 aa11.11□□□□□ -0.63
UBXN4-203ENST00000416538 C6orf62Q9GZU0 229 aaPredicted RBP11.11□□□□□ -0.63
UBXN4-203ENST00000416538 DISC1C4P0D8 188 aa11.1□□□□□ -0.63
UBXN4-203ENST00000416538 CORTO00230 105 aa11.1□□□□□ -0.63
UBXN4-203ENST00000416538 CLN5O75503 358 aa11.1□□□□□ -0.63
UBXN4-203ENST00000416538 B3GALNT1O75752 331 aa11.1□□□□□ -0.63
UBXN4-203ENST00000416538 DFFBO76075 338 aa11.1□□□□□ -0.63
UBXN4-203ENST00000416538 ATG12O94817 140 aa11.1□□□□□ -0.63
UBXN4-203ENST00000416538 SPCS3P61009 180 aa11.1□□□□□ -0.63
UBXN4-203ENST00000416538 SUPT4H1P63272 117 aaKnown RBP11.1□□□□□ -0.63
UBXN4-203ENST00000416538 TNFRSF9Q07011 255 aa11.1□□□□□ -0.63
UBXN4-203ENST00000416538 TMEM187Q14656 261 aa11.1□□□□□ -0.63
UBXN4-203ENST00000416538 FAM219AQ8IW50 185 aa11.1□□□□□ -0.63
UBXN4-203ENST00000416538 OR4X1Q8NH49 305 aa11.1□□□□□ -0.63
UBXN4-203ENST00000416538 BCL7BQ9BQE9 202 aa11.1□□□□□ -0.63
UBXN4-203ENST00000416538 GINS3Q9BRX5 216 aa11.1□□□□□ -0.63
UBXN4-203ENST00000416538 UBE2CO00762 179 aa11.09□□□□□ -0.63
UBXN4-203ENST00000416538 TNFSF8P32971 234 aa11.09□□□□□ -0.63
UBXN4-203ENST00000416538 BMI1P35226 326 aa11.09□□□□□ -0.63
UBXN4-203ENST00000416538 RPL5P46777 297 aaKnown RBP11.09□□□□□ -0.63
UBXN4-203ENST00000416538 TIGITQ495A1 244 aa11.09□□□□□ -0.63
UBXN4-203ENST00000416538 OR52E5Q8NH55 327 aa11.09□□□□□ -0.63
UBXN4-203ENST00000416538 TRIM63Q969Q1 353 aa11.09□□□□□ -0.63
UBXN4-203ENST00000416538 MS4A6AQ9H2W1 248 aa11.09□□□□□ -0.63
UBXN4-203ENST00000416538 TMEM56-RWDD3S4R434 201 aa11.09□□□□□ -0.63
UBXN4-203ENST00000416538 NOL3O60936 208 aaKnown RBP11.08□□□□□ -0.64
UBXN4-203ENST00000416538 IGLC1P0CG04 106 aa11.08□□□□□ -0.64
UBXN4-203ENST00000416538 DHODHQ02127 395 aa11.08□□□□□ -0.64
UBXN4-203ENST00000416538 LEMD1Q68G75 181 aa11.08□□□□□ -0.64
UBXN4-203ENST00000416538 PRSS54Q6PEW0 395 aa11.08□□□□□ -0.64
UBXN4-203ENST00000416538 STPG3Q8N7X2 389 aa11.08□□□□□ -0.64
UBXN4-203ENST00000416538 SLC24A4Q8NFF2 622 aa11.08□□□□□ -0.64
UBXN4-203ENST00000416538 PRRT1Q99946 306 aa11.08□□□□□ -0.64
UBXN4-203ENST00000416538 ENY2Q9NPA8 101 aa11.08□□□□□ -0.64
UBXN4-203ENST00000416538 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.08□□□□□ -0.64
UBXN4-203ENST00000416538 BIRC6Q9NR09 4857 aa11.07□□□□□ -0.64
UBXN4-203ENST00000416538 JTBO76095 146 aa11.07□□□□□ -0.64
UBXN4-203ENST00000416538 CRYBB3P26998 211 aa11.07□□□□□ -0.64
UBXN4-203ENST00000416538 RND2P52198 227 aa11.07□□□□□ -0.64
UBXN4-203ENST00000416538 SUB1P53999 127 aaKnown RBP eCLIP11.07□□□□□ -0.64
UBXN4-203ENST00000416538 C2orf83Q53S99 150 aa11.07□□□□□ -0.64
UBXN4-203ENST00000416538 NMSQ5H8A3 153 aa11.07□□□□□ -0.64
UBXN4-203ENST00000416538 V9GYH0 126 aa11.07□□□□□ -0.64
UBXN4-203ENST00000416538 CXorf65A6NEN9 183 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms