RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 RPS10-NUDT3A0A1W2PQS6 291 aa13.66□□□□□ -0.22
SEMA3B-201ENST00000416295 IGHV3-48P01763 117 aa13.66□□□□□ -0.22
SEMA3B-201ENST00000416295 CBLN1P23435 193 aa13.66□□□□□ -0.22
SEMA3B-201ENST00000416295 NPY1RP25929 384 aa13.66□□□□□ -0.22
SEMA3B-201ENST00000416295 ASAH1Q13510 395 aa13.66□□□□□ -0.22
SEMA3B-201ENST00000416295 GGNBP1Q5YKI7 109 aa13.66□□□□□ -0.22
SEMA3B-201ENST00000416295 ADAMTSL5Q6ZMM2 481 aa13.66□□□□□ -0.22
SEMA3B-201ENST00000416295 RNASEH2CQ8TDP1 164 aaKnown RBP13.66□□□□□ -0.22
SEMA3B-201ENST00000416295 NUDT15Q9NV35 164 aa13.66□□□□□ -0.22
SEMA3B-201ENST00000416295 TECRQ9NZ01 308 aaKnown RBP13.66□□□□□ -0.22
SEMA3B-201ENST00000416295 U3KQ87 197 aa13.66□□□□□ -0.22
SEMA3B-201ENST00000416295 FAM240BA0A1B0GVZ2 78 aa13.65□□□□□ -0.22
SEMA3B-201ENST00000416295 SCGB2A1O75556 95 aa13.65□□□□□ -0.22
SEMA3B-201ENST00000416295 MED6O75586 246 aa13.65□□□□□ -0.22
SEMA3B-201ENST00000416295 IFNA10P01566 189 aa13.65□□□□□ -0.22
SEMA3B-201ENST00000416295 IFNA21P01568 189 aa13.65□□□□□ -0.22
SEMA3B-201ENST00000416295 DAZ1Q9NQZ3 744 aaKnown RBP13.65□□□□□ -0.22
SEMA3B-201ENST00000416295 TBC1D24Q9ULP9 559 aa13.65□□□□□ -0.22
SEMA3B-201ENST00000416295 LSM4Q9Y4Z0 139 aaKnown RBP13.65□□□□□ -0.22
SEMA3B-201ENST00000416295 TRAV6A0A075B6T7 132 aa13.64□□□□□ -0.23
SEMA3B-201ENST00000416295 ATP5IP56385 69 aaPredicted RBP13.64□□□□□ -0.23
SEMA3B-201ENST00000416295 DEFB114Q30KQ6 69 aa13.64□□□□□ -0.23
SEMA3B-201ENST00000416295 TM4SF20Q53R12 229 aa13.64□□□□□ -0.23
SEMA3B-201ENST00000416295 UXS1Q8NBZ7 420 aa13.64□□□□□ -0.23
SEMA3B-201ENST00000416295 CACNG8Q8WXS5 425 aa13.64□□□□□ -0.23
SEMA3B-201ENST00000416295 FNDC4Q9H6D8 234 aaPredicted RBP13.64□□□□□ -0.23
SEMA3B-201ENST00000416295 MRPL27Q9P0M9 148 aaKnown RBP13.64□□□□□ -0.23
SEMA3B-201ENST00000416295 DNAH3Q8TD57 4116 aa13.64□□□□□ -0.23
SEMA3B-201ENST00000416295 C15orf62A8K5M9 175 aa13.63□□□□□ -0.23
SEMA3B-201ENST00000416295 ADAP1O75689 374 aa13.63□□□□□ -0.23
SEMA3B-201ENST00000416295 SLC25A4P12235 298 aa13.63□□□□□ -0.23
SEMA3B-201ENST00000416295 CD300EQ496F6 205 aaPredicted RBP13.63□□□□□ -0.23
SEMA3B-201ENST00000416295 ETFRF1Q6IPR1 90 aa13.63□□□□□ -0.23
SEMA3B-201ENST00000416295 OR4X1Q8NH49 305 aa13.63□□□□□ -0.23
SEMA3B-201ENST00000416295 MITD1Q8WV92 249 aa13.63□□□□□ -0.23
SEMA3B-201ENST00000416295 CIB3Q96Q77 187 aaPredicted RBP13.63□□□□□ -0.23
SEMA3B-201ENST00000416295 C20orf24Q9BUV8 137 aa13.63□□□□□ -0.23
SEMA3B-201ENST00000416295 SMAD5-AS1Q9Y6J3 95 aa13.63□□□□□ -0.23
SEMA3B-201ENST00000416295 K7EMT4 169 aa13.62□□□□□ -0.23
SEMA3B-201ENST00000416295 CLN5O75503 358 aa13.62□□□□□ -0.23
SEMA3B-201ENST00000416295 H2AFB2P0C5Z0 115 aa13.62□□□□□ -0.23
SEMA3B-201ENST00000416295 C8orf88P0DMB2 117 aa13.62□□□□□ -0.23
SEMA3B-201ENST00000416295 EDN2P20800 178 aa13.62□□□□□ -0.23
SEMA3B-201ENST00000416295 C11orf87Q6NUJ2 197 aa13.62□□□□□ -0.23
SEMA3B-201ENST00000416295 GTSCR1Q86UQ5 136 aa13.62□□□□□ -0.23
SEMA3B-201ENST00000416295 OR52B4Q8NGK2 314 aa13.62□□□□□ -0.23
SEMA3B-201ENST00000416295 TMEM170AQ8WVE7 144 aa13.62□□□□□ -0.23
SEMA3B-201ENST00000416295 TRAV30A0A087WSZ9 112 aa13.61□□□□□ -0.23
SEMA3B-201ENST00000416295 IZUMO1RA6ND01 250 aa13.61□□□□□ -0.23
SEMA3B-201ENST00000416295 YIF1AO95070 293 aa13.61□□□□□ -0.23
SEMA3B-201ENST00000416295 TMEM50AO95807 157 aa13.61□□□□□ -0.23
SEMA3B-201ENST00000416295 ENKURQ8TC29 256 aa13.61□□□□□ -0.23
SEMA3B-201ENST00000416295 MLXQ9UH92 298 aa13.61□□□□□ -0.23
SEMA3B-201ENST00000416295 SYNGR2O43760 224 aa13.6□□□□□ -0.23
SEMA3B-201ENST00000416295 IFNA4P05014 189 aa13.6□□□□□ -0.23
SEMA3B-201ENST00000416295 IAPPP10997 89 aa13.6□□□□□ -0.23
SEMA3B-201ENST00000416295 RAB11AP62491 216 aa13.6□□□□□ -0.23
SEMA3B-201ENST00000416295 RPP30P78346 268 aaKnown RBP13.6□□□□□ -0.23
SEMA3B-201ENST00000416295 CD69Q07108 199 aa13.6□□□□□ -0.23
SEMA3B-201ENST00000416295 MLANAQ16655 118 aa13.6□□□□□ -0.23
SEMA3B-201ENST00000416295 BTNL8Q6UX41 500 aa13.6□□□□□ -0.23
SEMA3B-201ENST00000416295 ZNF600Q6ZNG1 722 aa13.6□□□□□ -0.23
SEMA3B-201ENST00000416295 TMEM116Q8NCL8 245 aa13.6□□□□□ -0.23
SEMA3B-201ENST00000416295 ZNF431Q8TF32 576 aaPredicted RBP13.6□□□□□ -0.23
SEMA3B-201ENST00000416295 OR10C1Q96KK4 312 aa13.6□□□□□ -0.23
SEMA3B-201ENST00000416295 B9D2Q9BPU9 175 aa13.6□□□□□ -0.23
SEMA3B-201ENST00000416295 GINS3Q9BRX5 216 aa13.6□□□□□ -0.23
SEMA3B-201ENST00000416295 MRPL36Q9P0J6 103 aaKnown RBP13.6□□□□□ -0.23
SEMA3B-201ENST00000416295 SORL1Q92673 2214 aa13.6□□□□□ -0.23
SEMA3B-201ENST00000416295 IGHV3OR16-8A0A075B7F1 116 aa13.59□□□□□ -0.23
SEMA3B-201ENST00000416295 MPTX1A8MV57 137 aa13.59□□□□□ -0.23
SEMA3B-201ENST00000416295 RND2P52198 227 aa13.59□□□□□ -0.23
SEMA3B-201ENST00000416295 DEFA1P59665 94 aa13.59□□□□□ -0.23
SEMA3B-201ENST00000416295 DEFA3P59666 94 aa13.59□□□□□ -0.23
SEMA3B-201ENST00000416295 GUCA2BQ16661 112 aa13.59□□□□□ -0.23
SEMA3B-201ENST00000416295 PRSS54Q6PEW0 395 aa13.59□□□□□ -0.23
SEMA3B-201ENST00000416295 ZNF414Q96IQ9 312 aa13.59□□□□□ -0.23
SEMA3B-201ENST00000416295 MAGT1Q9H0U3 335 aa13.59□□□□□ -0.23
SEMA3B-201ENST00000416295 TRAV25A0A0B4J276 109 aa13.58□□□□□ -0.24
SEMA3B-201ENST00000416295 WRBO00258 174 aa13.58□□□□□ -0.24
SEMA3B-201ENST00000416295 ZNF207O43670 478 aaKnown RBP13.58□□□□□ -0.24
SEMA3B-201ENST00000416295 NKX2-1P43699 371 aaPredicted RBP13.58□□□□□ -0.24
SEMA3B-201ENST00000416295 IFITM3Q01628 133 aa13.58□□□□□ -0.24
SEMA3B-201ENST00000416295 ID3Q02535 119 aa13.58□□□□□ -0.24
SEMA3B-201ENST00000416295 IAH1Q2TAA2 248 aaPredicted RBP13.58□□□□□ -0.24
SEMA3B-201ENST00000416295 SLC16A13Q7RTY0 426 aa13.58□□□□□ -0.24
SEMA3B-201ENST00000416295 TMEM61Q8N0U2 210 aa13.58□□□□□ -0.24
SEMA3B-201ENST00000416295 OR4D5Q8NGN0 318 aa13.58□□□□□ -0.24
SEMA3B-201ENST00000416295 OR1S2Q8NGQ3 325 aa13.58□□□□□ -0.24
SEMA3B-201ENST00000416295 SEC22CQ9BRL7 303 aa13.58□□□□□ -0.24
SEMA3B-201ENST00000416295 PUS1Q9Y606 427 aaKnown RBP eCLIP13.58□□□□□ -0.24
SEMA3B-201ENST00000416295 ZNF785A8K8V0 405 aa13.57□□□□□ -0.24
SEMA3B-201ENST00000416295 BMI1P35226 326 aa13.57□□□□□ -0.24
SEMA3B-201ENST00000416295 LAMTOR1Q6IAA8 161 aa13.57□□□□□ -0.24
SEMA3B-201ENST00000416295 TOMM20LQ6UXN7 152 aa13.57□□□□□ -0.24
SEMA3B-201ENST00000416295 RBPMS2Q6ZRY4 209 aaKnown RBP13.57□□□□□ -0.24
SEMA3B-201ENST00000416295 Q8N1Y9 231 aa13.57□□□□□ -0.24
SEMA3B-201ENST00000416295 WDR89Q96FK6 387 aaPredicted RBP13.57□□□□□ -0.24
SEMA3B-201ENST00000416295 TRAV14DV4A0A0A6YYC5 116 aa13.56□□□□□ -0.24
SEMA3B-201ENST00000416295 IGHV7-4-1A0A0J9YVY3 117 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms