RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 F11RQ9Y624 299 aaKnown RBP12.97□□□□□ -0.33
PHRF1-203ENST00000416188 GAGE10A6NGK3 116 aa12.97□□□□□ -0.33
PHRF1-203ENST00000416188 WT1P19544 449 aaPredicted RBP12.97□□□□□ -0.33
PHRF1-203ENST00000416188 TEX45Q8NA69 505 aa12.97□□□□□ -0.33
PHRF1-203ENST00000416188 Q96MF0 132 aa12.97□□□□□ -0.33
PHRF1-203ENST00000416188 BPESC1Q9GZL8 116 aa12.97□□□□□ -0.33
PHRF1-203ENST00000416188 WISP1O95388 367 aa12.97□□□□□ -0.33
PHRF1-203ENST00000416188 ADIPOQQ15848 244 aa12.97□□□□□ -0.33
PHRF1-203ENST00000416188 KIR2DL4Q99706 377 aa12.97□□□□□ -0.33
PHRF1-203ENST00000416188 TRBV9A0A0B4J1U6 114 aa12.96□□□□□ -0.33
PHRF1-203ENST00000416188 M0R381 172 aa12.96□□□□□ -0.33
PHRF1-203ENST00000416188 DNLZQ5SXM8 178 aa12.96□□□□□ -0.33
PHRF1-203ENST00000416188 MIR17HGQ75NE6 70 aa12.96□□□□□ -0.33
PHRF1-203ENST00000416188 COX6CP09669 75 aa12.96□□□□□ -0.33
PHRF1-203ENST00000416188 PAQR4Q8N4S7 273 aaPredicted RBP12.96□□□□□ -0.33
PHRF1-203ENST00000416188 LINC01356Q8N9X3 169 aa12.96□□□□□ -0.33
PHRF1-203ENST00000416188 TMEM70Q9BUB7 260 aa12.96□□□□□ -0.33
PHRF1-203ENST00000416188 CARHSP1Q9Y2V2 147 aaKnown RBP12.96□□□□□ -0.33
PHRF1-203ENST00000416188 SAA2-SAA4A0A096LPE2 208 aa12.96□□□□□ -0.33
PHRF1-203ENST00000416188 TCRBV4S1A1TA0A5B7 111 aa12.96□□□□□ -0.33
PHRF1-203ENST00000416188 SAA1P0DJI8 122 aaPredicted RBP12.96□□□□□ -0.33
PHRF1-203ENST00000416188 SAA2P0DJI9 122 aaPredicted RBP12.96□□□□□ -0.33
PHRF1-203ENST00000416188 KLHDC3Q9BQ90 382 aa12.96□□□□□ -0.33
PHRF1-203ENST00000416188 PEX7O00628 323 aa12.96□□□□□ -0.34
PHRF1-203ENST00000416188 CD24P25063 80 aa12.96□□□□□ -0.34
PHRF1-203ENST00000416188 C3orf56Q8N813 242 aa12.96□□□□□ -0.34
PHRF1-203ENST00000416188 ARPC1AQ92747 370 aa12.96□□□□□ -0.34
PHRF1-203ENST00000416188 FBLN5Q9UBX5 448 aa12.96□□□□□ -0.34
PHRF1-203ENST00000416188 IMMP2LQ96T52 175 aa12.96□□□□□ -0.34
PHRF1-203ENST00000416188 IGHV3-11P01762 117 aa12.95□□□□□ -0.34
PHRF1-203ENST00000416188 MAPK1IP1LQ8NDC0 245 aa12.95□□□□□ -0.34
PHRF1-203ENST00000416188 RNF126Q9BV68 326 aa12.95□□□□□ -0.34
PHRF1-203ENST00000416188 ACACBO00763 2458 aa12.95□□□□□ -0.34
PHRF1-203ENST00000416188 K7ERU9 68 aa12.95□□□□□ -0.34
PHRF1-203ENST00000416188 FABP2P12104 132 aa12.95□□□□□ -0.34
PHRF1-203ENST00000416188 CCL1P22362 96 aa12.95□□□□□ -0.34
PHRF1-203ENST00000416188 WNT10AQ9GZT5 417 aa12.95□□□□□ -0.34
PHRF1-203ENST00000416188 DOCK10Q96BY6 2186 aa12.95□□□□□ -0.34
PHRF1-203ENST00000416188 J3QRE1 110 aa12.95□□□□□ -0.34
PHRF1-203ENST00000416188 CEACAM4O75871 244 aa12.95□□□□□ -0.34
PHRF1-203ENST00000416188 LGALS3P17931 250 aaKnown RBP12.95□□□□□ -0.34
PHRF1-203ENST00000416188 ARTNQ5T4W7 220 aa12.95□□□□□ -0.34
PHRF1-203ENST00000416188 IGF2-ASQ6U949 168 aa12.95□□□□□ -0.34
PHRF1-203ENST00000416188 CLEC19AQ6UXS0 136 aa12.95□□□□□ -0.34
PHRF1-203ENST00000416188 Q71RC1 249 aaPredicted RBP12.95□□□□□ -0.34
PHRF1-203ENST00000416188 CACNG8Q8WXS5 425 aa12.95□□□□□ -0.34
PHRF1-203ENST00000416188 IGKV1D-8A0A087WSZ0 117 aa12.94□□□□□ -0.34
PHRF1-203ENST00000416188 C18orf15Q96N68 181 aa12.94□□□□□ -0.34
PHRF1-203ENST00000416188 DMRTA2Q96SC8 542 aa12.94□□□□□ -0.34
PHRF1-203ENST00000416188 GSN-AS1Q9NRJ2 163 aa12.94□□□□□ -0.34
PHRF1-203ENST00000416188 E7EQL1 145 aa12.94□□□□□ -0.34
PHRF1-203ENST00000416188 TMEM136Q6ZRR5 245 aa12.94□□□□□ -0.34
PHRF1-203ENST00000416188 NLRC5Q86WI3 1866 aa12.94□□□□□ -0.34
PHRF1-203ENST00000416188 TMEM178BH3BS89 294 aa12.94□□□□□ -0.34
PHRF1-203ENST00000416188 FAM89BQ8N5H3 189 aa12.94□□□□□ -0.34
PHRF1-203ENST00000416188 NDUFS8O00217 210 aa12.94□□□□□ -0.34
PHRF1-203ENST00000416188 RAMP3O60896 148 aa12.94□□□□□ -0.34
PHRF1-203ENST00000416188 CD55P08174 381 aa12.94□□□□□ -0.34
PHRF1-203ENST00000416188 LY6G6FQ5SQ64 297 aa12.94□□□□□ -0.34
PHRF1-203ENST00000416188 ZNF256Q9Y2P7 627 aaPredicted RBP12.94□□□□□ -0.34
PHRF1-203ENST00000416188 YPEL1O60688 119 aa12.93□□□□□ -0.34
PHRF1-203ENST00000416188 MORN2Q502X0 79 aa12.93□□□□□ -0.34
PHRF1-203ENST00000416188 YPEL2Q96QA6 119 aa12.93□□□□□ -0.34
PHRF1-203ENST00000416188 GFI1Q99684 422 aa12.93□□□□□ -0.34
PHRF1-203ENST00000416188 IL36BQ9NZH7 164 aa12.93□□□□□ -0.34
PHRF1-203ENST00000416188 LINC00587B1AMM8 73 aa12.93□□□□□ -0.34
PHRF1-203ENST00000416188 WNT2P09544 360 aa12.93□□□□□ -0.34
PHRF1-203ENST00000416188 BRD3OSQ6XYD6 125 aa12.93□□□□□ -0.34
PHRF1-203ENST00000416188 ZNF497Q6ZNH5 498 aa12.93□□□□□ -0.34
PHRF1-203ENST00000416188 RNASEH2CQ8TDP1 164 aaKnown RBP12.93□□□□□ -0.34
PHRF1-203ENST00000416188 GEMIN7Q9H840 131 aaKnown RBP12.93□□□□□ -0.34
PHRF1-203ENST00000416188 H0YIZ8 118 aa12.93□□□□□ -0.34
PHRF1-203ENST00000416188 TMEM144Q7Z5S9 345 aa12.93□□□□□ -0.34
PHRF1-203ENST00000416188 C18orf12Q96KH6 178 aa12.93□□□□□ -0.34
PHRF1-203ENST00000416188 CACNA1AO00555 2505 aa12.92□□□□□ -0.34
PHRF1-203ENST00000416188 A0A0A6YYD4 124 aa12.92□□□□□ -0.34
PHRF1-203ENST00000416188 K7EM74 188 aa12.92□□□□□ -0.34
PHRF1-203ENST00000416188 UPK2O00526 184 aa12.92□□□□□ -0.34
PHRF1-203ENST00000416188 NBR2O15453 112 aa12.92□□□□□ -0.34
PHRF1-203ENST00000416188 NABP1Q96AH0 204 aa12.92□□□□□ -0.34
PHRF1-203ENST00000416188 PSMB11A5LHX3 300 aa12.92□□□□□ -0.34
PHRF1-203ENST00000416188 TMEM183AQ8IXX5 376 aa12.92□□□□□ -0.34
PHRF1-203ENST00000416188 CEACAM8P31997 349 aaPredicted RBP12.92□□□□□ -0.34
PHRF1-203ENST00000416188 CD69Q07108 199 aa12.92□□□□□ -0.34
PHRF1-203ENST00000416188 VMO1Q7Z5L0 202 aa12.92□□□□□ -0.34
PHRF1-203ENST00000416188 MOB4Q9Y3A3 225 aa12.92□□□□□ -0.34
PHRF1-203ENST00000416188 IGKV1-12A0A0C4DH73 117 aa12.92□□□□□ -0.34
PHRF1-203ENST00000416188 IGKV1D-12P01611 117 aa12.92□□□□□ -0.34
PHRF1-203ENST00000416188 COL8A2P25067 703 aa12.92□□□□□ -0.34
PHRF1-203ENST00000416188 MEIG1Q5JSS6 88 aa12.92□□□□□ -0.34
PHRF1-203ENST00000416188 PRELID3AQ96N28 172 aa12.92□□□□□ -0.34
PHRF1-203ENST00000416188 A0A1B0GUT8 65 aa12.91□□□□□ -0.34
PHRF1-203ENST00000416188 SRSF3P84103 164 aaKnown RBP12.91□□□□□ -0.34
PHRF1-203ENST00000416188 PEMTQ9UBM1 199 aa12.91□□□□□ -0.34
PHRF1-203ENST00000416188 ZNF407Q9C0G0 2248 aa12.91□□□□□ -0.34
PHRF1-203ENST00000416188 GTF3AQ92664 365 aaKnown RBP12.91□□□□□ -0.34
PHRF1-203ENST00000416188 TMEM160Q9NX00 188 aa12.91□□□□□ -0.34
PHRF1-203ENST00000416188 SRRM5B3KS81 715 aa12.91□□□□□ -0.34
PHRF1-203ENST00000416188 SDF2L1Q9HCN8 221 aa12.91□□□□□ -0.34
PHRF1-203ENST00000416188 TSC2P49815 1807 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms