RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SMIM7Q9BQ49 75 aa11.66□□□□□ -0.54
SGCE-202ENST00000415788 SOX21Q9Y651 276 aaPredicted RBP11.66□□□□□ -0.54
SGCE-202ENST00000415788 MAP1LC3B2A6NCE7 125 aa11.65□□□□□ -0.54
SGCE-202ENST00000415788 H7BYZ3 331 aa11.65□□□□□ -0.54
SGCE-202ENST00000415788 REG1BP48304 166 aa11.65□□□□□ -0.54
SGCE-202ENST00000415788 IQCJQ1A5X6 159 aa11.65□□□□□ -0.54
SGCE-202ENST00000415788 RPL39P5Q59GN2 51 aa11.65□□□□□ -0.54
SGCE-202ENST00000415788 DRAM1Q8N682 238 aa11.65□□□□□ -0.54
SGCE-202ENST00000415788 SSMEM1Q8WWF3 244 aa11.65□□□□□ -0.54
SGCE-202ENST00000415788 ZNF48Q96MX3 618 aaPredicted RBP11.65□□□□□ -0.54
SGCE-202ENST00000415788 RSG1Q9BU20 258 aa11.65□□□□□ -0.54
SGCE-202ENST00000415788 MAP1LC3BQ9GZQ8 125 aa11.65□□□□□ -0.54
SGCE-202ENST00000415788 MDFIC2A0A1B0GVS7 189 aa11.64□□□□□ -0.55
SGCE-202ENST00000415788 M0R1X1 148 aa11.64□□□□□ -0.55
SGCE-202ENST00000415788 SYNGR2O43760 224 aa11.64□□□□□ -0.55
SGCE-202ENST00000415788 HRASP01112 189 aa11.64□□□□□ -0.55
SGCE-202ENST00000415788 SERPINE2P07093 398 aa11.64□□□□□ -0.55
SGCE-202ENST00000415788 BTF3P20290 206 aaKnown RBP11.64□□□□□ -0.55
SGCE-202ENST00000415788 GALR1P47211 349 aa11.64□□□□□ -0.55
SGCE-202ENST00000415788 TMEM267Q0VDI3 215 aaPredicted RBP11.64□□□□□ -0.55
SGCE-202ENST00000415788 ADIRFQ15847 76 aa11.64□□□□□ -0.55
SGCE-202ENST00000415788 TMEM86BQ8N661 226 aa11.64□□□□□ -0.55
SGCE-202ENST00000415788 SIGLECL1Q8N7X8 197 aa11.64□□□□□ -0.55
SGCE-202ENST00000415788 ADTRPQ96IZ2 230 aa11.64□□□□□ -0.55
SGCE-202ENST00000415788 JMJD8Q96S16 334 aa11.64□□□□□ -0.55
SGCE-202ENST00000415788 MRPL20Q9BYC9 149 aaKnown RBP11.64□□□□□ -0.55
SGCE-202ENST00000415788 PSENENQ9NZ42 101 aa11.64□□□□□ -0.55
SGCE-202ENST00000415788 TIMM23O14925 209 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 PROP1O75360 226 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 IGLV2-14P01704 120 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 TYMSP04818 313 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 IER3P46695 156 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 MEF2BQ02080 365 aaPredicted RBP11.63□□□□□ -0.55
SGCE-202ENST00000415788 ZNF66Q6ZN08 573 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 MOB3BQ86TA1 216 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 HSD17B10Q99714 261 aaKnown RBP11.63□□□□□ -0.55
SGCE-202ENST00000415788 NABP2Q9BQ15 211 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 WDR61Q9GZS3 305 aaKnown RBP11.63□□□□□ -0.55
SGCE-202ENST00000415788 PPP1R14DQ9NXH3 145 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 CT45A6P0DMU7 189 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 CT45A5P0DMU8 189 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 CT45A7P0DMV0 189 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 CD1BP29016 333 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 MC5RP33032 325 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 PSMB3P49720 205 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 THBS3P49746 956 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 RPL23P62829 140 aaKnown RBP11.63□□□□□ -0.55
SGCE-202ENST00000415788 ACTL10Q5JWF8 245 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 MRPL52Q86TS9 123 aaKnown RBP11.63□□□□□ -0.55
SGCE-202ENST00000415788 OR5AN1Q8NGI8 311 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 CFHR4Q92496 578 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 RBKSQ9H477 322 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 VSIRQ9H7M9 311 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 MANBALQ9NQG1 85 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 SLC39A9Q9NUM3 307 aa11.63□□□□□ -0.55
SGCE-202ENST00000415788 FN1P02751 2386 aaKnown RBP11.63□□□□□ -0.55
SGCE-202ENST00000415788 ZNF705GA8MUZ8 300 aaPredicted RBP11.62□□□□□ -0.55
SGCE-202ENST00000415788 FAM90A26D6RGX4 464 aa11.62□□□□□ -0.55
SGCE-202ENST00000415788 GGCTO75223 188 aaKnown RBP11.62□□□□□ -0.55
SGCE-202ENST00000415788 NXPH3O95157 252 aa11.62□□□□□ -0.55
SGCE-202ENST00000415788 VENTXO95231 258 aa11.62□□□□□ -0.55
SGCE-202ENST00000415788 FAM106CPP0CH98 169 aa11.62□□□□□ -0.55
SGCE-202ENST00000415788 RAB4AP20338 218 aa11.62□□□□□ -0.55
SGCE-202ENST00000415788 FGF8P55075 233 aaPredicted RBP11.62□□□□□ -0.55
SGCE-202ENST00000415788 HILS1P60008 231 aa11.62□□□□□ -0.55
SGCE-202ENST00000415788 C5orf30Q96GV9 206 aa11.62□□□□□ -0.55
SGCE-202ENST00000415788 A0A0G2JRQ6 117 aa11.61□□□□□ -0.55
SGCE-202ENST00000415788 FAM90A9PA6NNJ1 464 aa11.61□□□□□ -0.55
SGCE-202ENST00000415788 H3BP45 60 aa11.61□□□□□ -0.55
SGCE-202ENST00000415788 MBP02144 154 aa11.61□□□□□ -0.55
SGCE-202ENST00000415788 APOA2P02652 100 aa11.61□□□□□ -0.55
SGCE-202ENST00000415788 DUTP33316 252 aaKnown RBP11.61□□□□□ -0.55
SGCE-202ENST00000415788 CATR1Q13166 79 aa11.61□□□□□ -0.55
SGCE-202ENST00000415788 KCNIP4Q6PIL6 250 aa11.61□□□□□ -0.55
SGCE-202ENST00000415788 SSX7Q7RTT5 188 aa11.61□□□□□ -0.55
SGCE-202ENST00000415788 TMEM68Q96MH6 324 aa11.61□□□□□ -0.55
SGCE-202ENST00000415788 RNF212BA8MTL3 300 aa11.61□□□□□ -0.55
SGCE-202ENST00000415788 H0YJW9 148 aa11.61□□□□□ -0.55
SGCE-202ENST00000415788 H3BUX3 64 aa11.61□□□□□ -0.55
SGCE-202ENST00000415788 HOXA3O43365 443 aaPredicted RBP11.61□□□□□ -0.55
SGCE-202ENST00000415788 MDKP21741 143 aaPredicted RBP11.61□□□□□ -0.55
SGCE-202ENST00000415788 EIF4EBP1Q13541 118 aaPredicted RBP11.61□□□□□ -0.55
SGCE-202ENST00000415788 OR2T10Q8NGZ9 312 aa11.61□□□□□ -0.55
SGCE-202ENST00000415788 TAF15Q92804 592 aaKnown RBP eCLIP11.61□□□□□ -0.55
SGCE-202ENST00000415788 TCF19Q9Y242 345 aa11.61□□□□□ -0.55
SGCE-202ENST00000415788 WASHC3Q9Y3C0 194 aa11.61□□□□□ -0.55
SGCE-202ENST00000415788 SVEP1Q4LDE5 3571 aa11.6□□□□□ -0.55
SGCE-202ENST00000415788 CTXND1A0A1B0GTU2 59 aa11.6□□□□□ -0.55
SGCE-202ENST00000415788 M0R143 59 aa11.6□□□□□ -0.55
SGCE-202ENST00000415788 TCF21O43680 179 aa11.6□□□□□ -0.55
SGCE-202ENST00000415788 IGHV4-59P01825 116 aa11.6□□□□□ -0.55
SGCE-202ENST00000415788 SNRPCP09234 159 aaKnown RBP11.6□□□□□ -0.55
SGCE-202ENST00000415788 ERVFC1-1P60608 527 aa11.6□□□□□ -0.55
SGCE-202ENST00000415788 TNFRSF9Q07011 255 aa11.6□□□□□ -0.55
SGCE-202ENST00000415788 EBI3Q14213 229 aa11.6□□□□□ -0.55
SGCE-202ENST00000415788 ATP6V1FQ16864 119 aa11.6□□□□□ -0.55
SGCE-202ENST00000415788 RTL8BQ17RB0 113 aa11.6□□□□□ -0.55
SGCE-202ENST00000415788 PDPNQ86YL7 162 aa11.6□□□□□ -0.55
SGCE-202ENST00000415788 PIFOQ8TCI5 191 aa11.6□□□□□ -0.55
SGCE-202ENST00000415788 CACNG5Q9UF02 275 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms