RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 ARV1Q9H2C2 271 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 KLK9Q9UKQ9 250 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 WDR83OSQ9Y284 106 aa7.55□□□□□ -1.2
RIF1-202ENST00000414861 BORCS7-ASMTA0A0B4J1R7 106 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 TSPAN9O75954 239 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 IGLV1-40P01703 118 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 IGHV3-23P01764 117 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 FGF7P21781 194 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 GPX4P36969 197 aaPredicted RBP7.54□□□□□ -1.2
RIF1-202ENST00000414861 ATP6V1FQ16864 119 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 C15orf32Q32M92 178 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 OR1L6Q8NGR2 347 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 SCARB1Q8WTV0 552 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 CACNG8Q8WXS5 425 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 NPIPB3Q92617 1050 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 JMJD8Q96S16 334 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 FBXL7Q9UJT9 491 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 LSM4Q9Y4Z0 139 aaKnown RBP7.54□□□□□ -1.2
RIF1-202ENST00000414861 F8W735 103 aaPredicted RBP7.54□□□□□ -1.2
RIF1-202ENST00000414861 TPT1P13693 172 aaKnown RBP7.54□□□□□ -1.2
RIF1-202ENST00000414861 ALKAL2Q6UX46 152 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 BAP18Q8IXM2 172 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 SLC35E1Q96K37 410 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 MGST2Q99735 147 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 GINS3Q9BRX5 216 aa7.54□□□□□ -1.2
RIF1-202ENST00000414861 IGKV1D-37A0A075B6S9 117 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 FNDC10F2Z333 226 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 IFNA5P01569 189 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 IGHG4P01861 327 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 ATP6V0CP27449 155 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 RPL15P61313 204 aaKnown RBP7.53□□□□□ -1.2
RIF1-202ENST00000414861 TEX261Q6UWH6 196 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 BTNL8Q6UX41 500 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 TMED6Q8WW62 240 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 GON7Q9BXV9 100 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 NPCDR1Q9BY65 106 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 RPS10-NUDT3A0A1W2PQS6 291 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 PSMB11A5LHX3 300 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 TRGV3P03979 118 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 CRYBA1P05813 215 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 PF4V1P10720 104 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 PSMB8P28062 276 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 TPPP2P59282 170 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 FAM74A1Q5RGS3 127 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 TMEM144Q7Z5S9 345 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 NECAP1Q8NC96 275 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 TMEM116Q8NCL8 245 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 PARD6GQ9BYG4 376 aaPredicted RBP7.53□□□□□ -1.2
RIF1-202ENST00000414861 SLC25A32Q9H2D1 315 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 NPVFQ9HCQ7 196 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 PLA2G2EQ9NZK7 142 aa7.53□□□□□ -1.2
RIF1-202ENST00000414861 CYB5BO43169 146 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 HIST1H1BP16401 226 aaKnown RBP7.52□□□□□ -1.21
RIF1-202ENST00000414861 ETFRF1Q6IPR1 90 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 ACSM6Q6P461 480 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 TEPPQ6URK8 271 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 SCGB1C1Q8TD33 95 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 CCDC140Q96MF4 163 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 GGTLC1Q9BX51 225 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 THYN1Q9P016 225 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 ATRQ13535 2644 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 H3BUA1 57 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 SPP1P10451 314 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 HIST2H2BDQ6DRA6 164 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 TMEM182Q6ZP80 229 aaPredicted RBP7.52□□□□□ -1.21
RIF1-202ENST00000414861 THAP8Q8NA92 274 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 ZNF680Q8NEM1 530 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 OR4X1Q8NH49 305 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 LINC01006Q8NI28 216 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 SLA2Q9H6Q3 261 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 C21orf62Q9NYP8 219 aa7.52□□□□□ -1.21
RIF1-202ENST00000414861 FAM223BA6NKX1 122 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 AGPAT2O15120 278 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 BRI3O95415 125 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 IGLC1P0CG04 106 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 GATA2P23769 480 aaPredicted RBP7.51□□□□□ -1.21
RIF1-202ENST00000414861 OR10J1P30954 320 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 RAB9AP51151 201 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 ZNF90Q03938 601 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 FAM223AQ8IWN6 122 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 ZNF502Q8TBZ5 544 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 OR2T8A6NH00 312 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 IGKV1-17P01599 117 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 IGHV3-11P01762 117 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 RPLP1P05386 114 aaKnown RBP7.51□□□□□ -1.21
RIF1-202ENST00000414861 CAMLGP49069 296 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 EIF5AP63241 154 aaKnown RBP7.51□□□□□ -1.21
RIF1-202ENST00000414861 KIAA0141Q14154 515 aaPredicted RBP7.51□□□□□ -1.21
RIF1-202ENST00000414861 MIC13Q5XKP0 118 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 KLHDC1Q8N7A1 406 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 VN1R17PQ8TDU5 208 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 WIPF2Q8TF74 440 aaPredicted RBP7.51□□□□□ -1.21
RIF1-202ENST00000414861 C16orf95Q9H693 158 aa7.51□□□□□ -1.21
RIF1-202ENST00000414861 ZFP92A6NM28 416 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 CLN5O75503 358 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 NDUFA7O95182 113 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 GPR183P32249 361 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 MFAP4P55083 255 aa7.5□□□□□ -1.21
RIF1-202ENST00000414861 ELLP55199 621 aaPredicted RBP7.5□□□□□ -1.21
RIF1-202ENST00000414861 SLC35B1P78383 322 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms