RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 LRTM2Q8N967 370 aa12.21□□□□□ -0.45
DDR1-230ENST00000412274 RNASEH2CQ8TDP1 164 aaKnown RBP12.21□□□□□ -0.45
DDR1-230ENST00000412274 OR10C1Q96KK4 312 aa12.21□□□□□ -0.45
DDR1-230ENST00000412274 ASCL2Q99929 193 aa12.21□□□□□ -0.45
DDR1-230ENST00000412274 GINS3Q9BRX5 216 aa12.21□□□□□ -0.45
DDR1-230ENST00000412274 SLC25A6P12236 298 aa12.2□□□□□ -0.46
DDR1-230ENST00000412274 OPRK1P41145 380 aa12.2□□□□□ -0.46
DDR1-230ENST00000412274 C2orf83Q53S99 150 aa12.2□□□□□ -0.46
DDR1-230ENST00000412274 ETFRF1Q6IPR1 90 aa12.2□□□□□ -0.46
DDR1-230ENST00000412274 BTNL8Q6UX41 500 aa12.2□□□□□ -0.46
DDR1-230ENST00000412274 LINC00299Q6ZSB3 139 aa12.2□□□□□ -0.46
DDR1-230ENST00000412274 TMEM61Q8N0U2 210 aa12.2□□□□□ -0.46
DDR1-230ENST00000412274 CENPSQ8N2Z9 138 aa12.2□□□□□ -0.46
DDR1-230ENST00000412274 OR4X1Q8NH49 305 aa12.2□□□□□ -0.46
DDR1-230ENST00000412274 CACNG8Q8WXS5 425 aa12.2□□□□□ -0.46
DDR1-230ENST00000412274 SPAG8Q99932 426 aaPredicted RBP12.2□□□□□ -0.46
DDR1-230ENST00000412274 C20orf24Q9BUV8 137 aa12.2□□□□□ -0.46
DDR1-230ENST00000412274 U3KQ87 197 aa12.2□□□□□ -0.46
DDR1-230ENST00000412274 TSPAN4O14817 238 aa12.19□□□□□ -0.46
DDR1-230ENST00000412274 YIF1AO95070 293 aa12.19□□□□□ -0.46
DDR1-230ENST00000412274 TMEM50AO95807 157 aa12.19□□□□□ -0.46
DDR1-230ENST00000412274 SLC25A4P12235 298 aa12.19□□□□□ -0.46
DDR1-230ENST00000412274 TNFRSF9Q07011 255 aa12.19□□□□□ -0.46
DDR1-230ENST00000412274 ZNF600Q6ZNG1 722 aa12.19□□□□□ -0.46
DDR1-230ENST00000412274 SLC24A4Q8NFF2 622 aa12.19□□□□□ -0.46
DDR1-230ENST00000412274 OR52B4Q8NGK2 314 aa12.19□□□□□ -0.46
DDR1-230ENST00000412274 WDR89Q96FK6 387 aaPredicted RBP12.19□□□□□ -0.46
DDR1-230ENST00000412274 TM2D3Q9BRN9 247 aa12.19□□□□□ -0.46
DDR1-230ENST00000412274 HSPB7Q9UBY9 170 aa12.19□□□□□ -0.46
DDR1-230ENST00000412274 TMED3Q9Y3Q3 217 aa12.19□□□□□ -0.46
DDR1-230ENST00000412274 TRAV14DV4A0A0A6YYC5 116 aa12.18□□□□□ -0.46
DDR1-230ENST00000412274 OR11H12B2RN74 326 aa12.18□□□□□ -0.46
DDR1-230ENST00000412274 CLN5O75503 358 aa12.18□□□□□ -0.46
DDR1-230ENST00000412274 SFT2D2O95562 160 aa12.18□□□□□ -0.46
DDR1-230ENST00000412274 VAMP1P23763 118 aa12.18□□□□□ -0.46
DDR1-230ENST00000412274 CMC4P56277 68 aaPredicted RBP12.18□□□□□ -0.46
DDR1-230ENST00000412274 LYZL2Q7Z4W2 148 aa12.18□□□□□ -0.46
DDR1-230ENST00000412274 SMPXQ9UHP9 88 aa12.18□□□□□ -0.46
DDR1-230ENST00000412274 IGHV7-4-1A0A0J9YVY3 117 aa12.17□□□□□ -0.46
DDR1-230ENST00000412274 FAM90A26D6RGX4 464 aa12.17□□□□□ -0.46
DDR1-230ENST00000412274 NDUFB6O95139 128 aa12.17□□□□□ -0.46
DDR1-230ENST00000412274 EDN2P20800 178 aa12.17□□□□□ -0.46
DDR1-230ENST00000412274 BAK1Q16611 211 aa12.17□□□□□ -0.46
DDR1-230ENST00000412274 TMEM116Q8NCL8 245 aa12.17□□□□□ -0.46
DDR1-230ENST00000412274 OR1S1Q8NH92 325 aa12.17□□□□□ -0.46
DDR1-230ENST00000412274 DTD1Q8TEA8 209 aa12.17□□□□□ -0.46
DDR1-230ENST00000412274 RCHY1Q96PM5 261 aa12.17□□□□□ -0.46
DDR1-230ENST00000412274 FAM110AQ9BQ89 295 aa12.17□□□□□ -0.46
DDR1-230ENST00000412274 SPATA25Q9BR10 227 aa12.17□□□□□ -0.46
DDR1-230ENST00000412274 TMEM231Q9H6L2 316 aa12.17□□□□□ -0.46
DDR1-230ENST00000412274 OR4C46A6NHA9 309 aa12.16□□□□□ -0.46
DDR1-230ENST00000412274 MED6O75586 246 aa12.16□□□□□ -0.46
DDR1-230ENST00000412274 SCAF4O95104 1147 aaKnown RBP12.16□□□□□ -0.46
DDR1-230ENST00000412274 CD7P09564 240 aa12.16□□□□□ -0.46
DDR1-230ENST00000412274 NPY1RP25929 384 aa12.16□□□□□ -0.46
DDR1-230ENST00000412274 A0A1W2PS18 150 aa12.15□□□□□ -0.46
DDR1-230ENST00000412274 IFNA10P01566 189 aa12.15□□□□□ -0.46
DDR1-230ENST00000412274 IGHV3-48P01763 117 aa12.15□□□□□ -0.46
DDR1-230ENST00000412274 PAFAH1B2P68402 229 aa12.15□□□□□ -0.46
DDR1-230ENST00000412274 HAGHQ16775 308 aa12.15□□□□□ -0.46
DDR1-230ENST00000412274 TOMM20LQ6UXN7 152 aa12.15□□□□□ -0.46
DDR1-230ENST00000412274 LINC00322Q6ZN03 302 aaPredicted RBP12.15□□□□□ -0.46
DDR1-230ENST00000412274 OR1S2Q8NGQ3 325 aa12.15□□□□□ -0.46
DDR1-230ENST00000412274 CIB3Q96Q77 187 aaPredicted RBP12.15□□□□□ -0.46
DDR1-230ENST00000412274 RHPN1-AS1Q9BWJ2 59 aa12.15□□□□□ -0.46
DDR1-230ENST00000412274 FNDC4Q9H6D8 234 aaPredicted RBP12.15□□□□□ -0.46
DDR1-230ENST00000412274 CHEK1O14757 476 aa12.14□□□□□ -0.47
DDR1-230ENST00000412274 PITX3O75364 302 aa12.14□□□□□ -0.47
DDR1-230ENST00000412274 IL7P13232 177 aa12.14□□□□□ -0.47
DDR1-230ENST00000412274 RPP30P78346 268 aaKnown RBP12.14□□□□□ -0.47
DDR1-230ENST00000412274 PPP1R1AQ13522 171 aa12.14□□□□□ -0.47
DDR1-230ENST00000412274 COQ8AQ8NI60 647 aa12.14□□□□□ -0.47
DDR1-230ENST00000412274 NARS2Q96I59 477 aaKnown RBP12.14□□□□□ -0.47
DDR1-230ENST00000412274 SDHCQ99643 169 aaPredicted RBP12.14□□□□□ -0.47
DDR1-230ENST00000412274 RBKSQ9H477 322 aa12.14□□□□□ -0.47
DDR1-230ENST00000412274 SRD5A3Q9H8P0 318 aa12.14□□□□□ -0.47
DDR1-230ENST00000412274 PRR13Q9NZ81 148 aa12.14□□□□□ -0.47
DDR1-230ENST00000412274 PUS1Q9Y606 427 aaKnown RBP eCLIP12.14□□□□□ -0.47
DDR1-230ENST00000412274 NPPCP23582 126 aa12.13□□□□□ -0.47
DDR1-230ENST00000412274 GPX4P36969 197 aaPredicted RBP12.13□□□□□ -0.47
DDR1-230ENST00000412274 YPEL3P61236 119 aaPredicted RBP12.13□□□□□ -0.47
DDR1-230ENST00000412274 RAB11AP62491 216 aa12.13□□□□□ -0.47
DDR1-230ENST00000412274 DEFB125Q8N687 156 aa12.13□□□□□ -0.47
DDR1-230ENST00000412274 Q8WTZ3 238 aa12.13□□□□□ -0.47
DDR1-230ENST00000412274 CCDC32Q9BV29 185 aa12.13□□□□□ -0.47
DDR1-230ENST00000412274 C9orf170A2RU37 121 aa12.12□□□□□ -0.47
DDR1-230ENST00000412274 C3orf84H3BNL1 204 aa12.12□□□□□ -0.47
DDR1-230ENST00000412274 ZNF207O43670 478 aaKnown RBP12.12□□□□□ -0.47
DDR1-230ENST00000412274 PRSS54Q6PEW0 395 aa12.12□□□□□ -0.47
DDR1-230ENST00000412274 S100ZQ8WXG8 99 aa12.12□□□□□ -0.47
DDR1-230ENST00000412274 ZNF414Q96IQ9 312 aa12.12□□□□□ -0.47
DDR1-230ENST00000412274 METTL26Q96S19 204 aa12.12□□□□□ -0.47
DDR1-230ENST00000412274 VSIRQ9H7M9 311 aa12.12□□□□□ -0.47
DDR1-230ENST00000412274 ZFAND3Q9H8U3 227 aa12.12□□□□□ -0.47
DDR1-230ENST00000412274 IGHV3OR16-8A0A075B7F1 116 aa12.11□□□□□ -0.47
DDR1-230ENST00000412274 LOC102724200A0A096LPH7 203 aaPredicted RBP12.11□□□□□ -0.47
DDR1-230ENST00000412274 TRAV2A0A0B4J234 112 aa12.11□□□□□ -0.47
DDR1-230ENST00000412274 IFNA21P01568 189 aa12.11□□□□□ -0.47
DDR1-230ENST00000412274 IFNA4P05014 189 aa12.11□□□□□ -0.47
DDR1-230ENST00000412274 OR4E1P0C645 316 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms