RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 HTR2BP41595 481 aa9.08□□□□□ -0.96
NEDD1-202ENST00000411739 MZT2BQ6NZ67 158 aa9.08□□□□□ -0.96
NEDD1-202ENST00000411739 PAIP2BQ9ULR5 123 aaKnown RBP9.08□□□□□ -0.96
NEDD1-202ENST00000411739 IGHV3-49A0A0A0MS15 119 aa9.07□□□□□ -0.96
NEDD1-202ENST00000411739 GP9P14770 177 aa9.07□□□□□ -0.96
NEDD1-202ENST00000411739 CBLN1P23435 193 aa9.07□□□□□ -0.96
NEDD1-202ENST00000411739 NPY1RP25929 384 aa9.07□□□□□ -0.96
NEDD1-202ENST00000411739 CD300EQ496F6 205 aaPredicted RBP9.07□□□□□ -0.96
NEDD1-202ENST00000411739 PVRIGQ6DKI7 326 aa9.07□□□□□ -0.96
NEDD1-202ENST00000411739 OR10C1Q96KK4 312 aa9.07□□□□□ -0.96
NEDD1-202ENST00000411739 LGALS9O00182 355 aa9.07□□□□□ -0.96
NEDD1-202ENST00000411739 WRBO00258 174 aa9.07□□□□□ -0.96
NEDD1-202ENST00000411739 NUPL2O15504 423 aaKnown RBP9.07□□□□□ -0.96
NEDD1-202ENST00000411739 NRARPQ7Z6K4 114 aa9.07□□□□□ -0.96
NEDD1-202ENST00000411739 DUSP18Q8NEJ0 188 aa9.07□□□□□ -0.96
NEDD1-202ENST00000411739 ENKURQ8TC29 256 aa9.07□□□□□ -0.96
NEDD1-202ENST00000411739 DYNLRB2Q8TF09 96 aa9.07□□□□□ -0.96
NEDD1-202ENST00000411739 IGHV3OR16-13A0A075B7E8 117 aa9.06□□□□□ -0.96
NEDD1-202ENST00000411739 IGHV3-74A0A0B4J1X5 117 aa9.06□□□□□ -0.96
NEDD1-202ENST00000411739 C2orf83Q53S99 150 aa9.06□□□□□ -0.96
NEDD1-202ENST00000411739 MITD1Q8WV92 249 aa9.06□□□□□ -0.96
NEDD1-202ENST00000411739 ZNF436Q9C0F3 470 aaPredicted RBP9.06□□□□□ -0.96
NEDD1-202ENST00000411739 GSKIPQ9P0R6 139 aa9.06□□□□□ -0.96
NEDD1-202ENST00000411739 MLXQ9UH92 298 aa9.06□□□□□ -0.96
NEDD1-202ENST00000411739 FAM25EA8MYX2 175 aa9.06□□□□□ -0.96
NEDD1-202ENST00000411739 TMEM50AO95807 157 aa9.06□□□□□ -0.96
NEDD1-202ENST00000411739 SCGB1D2O95969 90 aa9.06□□□□□ -0.96
NEDD1-202ENST00000411739 POLR2GP62487 172 aaKnown RBP eCLIP9.06□□□□□ -0.96
NEDD1-202ENST00000411739 DEFB114Q30KQ6 69 aa9.06□□□□□ -0.96
NEDD1-202ENST00000411739 SPSB3Q6PJ21 355 aa9.06□□□□□ -0.96
NEDD1-202ENST00000411739 H3BP45 60 aa9.05□□□□□ -0.96
NEDD1-202ENST00000411739 IFNA21P01568 189 aa9.05□□□□□ -0.96
NEDD1-202ENST00000411739 IFNA4P05014 189 aa9.05□□□□□ -0.96
NEDD1-202ENST00000411739 NPBWR1P48145 328 aa9.05□□□□□ -0.96
NEDD1-202ENST00000411739 PRSS54Q6PEW0 395 aa9.05□□□□□ -0.96
NEDD1-202ENST00000411739 BTNL8Q6UX41 500 aa9.05□□□□□ -0.96
NEDD1-202ENST00000411739 ZNF431Q8TF32 576 aaPredicted RBP9.05□□□□□ -0.96
NEDD1-202ENST00000411739 TMEM190Q8WZ59 177 aa9.05□□□□□ -0.96
NEDD1-202ENST00000411739 WDR89Q96FK6 387 aaPredicted RBP9.05□□□□□ -0.96
NEDD1-202ENST00000411739 ZMAT5Q9UDW3 170 aaKnown RBP9.05□□□□□ -0.96
NEDD1-202ENST00000411739 SYNGR2O43760 224 aa9.05□□□□□ -0.96
NEDD1-202ENST00000411739 SLC25A6P12236 298 aa9.05□□□□□ -0.96
NEDD1-202ENST00000411739 RND2P52198 227 aa9.05□□□□□ -0.96
NEDD1-202ENST00000411739 GUCA2BQ16661 112 aa9.05□□□□□ -0.96
NEDD1-202ENST00000411739 IAH1Q2TAA2 248 aaPredicted RBP9.05□□□□□ -0.96
NEDD1-202ENST00000411739 TIGITQ495A1 244 aa9.05□□□□□ -0.96
NEDD1-202ENST00000411739 ACY3Q96HD9 319 aa9.05□□□□□ -0.96
NEDD1-202ENST00000411739 TXN2Q99757 166 aa9.05□□□□□ -0.96
NEDD1-202ENST00000411739 LSM4Q9Y4Z0 139 aaKnown RBP9.05□□□□□ -0.96
NEDD1-202ENST00000411739 C15orf62A8K5M9 175 aa9.04□□□□□ -0.96
NEDD1-202ENST00000411739 CORTO00230 105 aa9.04□□□□□ -0.96
NEDD1-202ENST00000411739 NDUFA4O00483 81 aa9.04□□□□□ -0.96
NEDD1-202ENST00000411739 SCAF4O95104 1147 aaKnown RBP9.04□□□□□ -0.96
NEDD1-202ENST00000411739 FCGR2BP31994 310 aaPredicted RBP9.04□□□□□ -0.96
NEDD1-202ENST00000411739 SIGLEC8Q9NYZ4 499 aa9.04□□□□□ -0.96
NEDD1-202ENST00000411739 UFC1Q9Y3C8 167 aa9.04□□□□□ -0.96
NEDD1-202ENST00000411739 U3KQ87 197 aa9.04□□□□□ -0.96
NEDD1-202ENST00000411739 PIGBOS1A0A0B4J2F0 54 aa9.04□□□□□ -0.96
NEDD1-202ENST00000411739 A8MWP6 167 aa9.04□□□□□ -0.96
NEDD1-202ENST00000411739 CLN5O75503 358 aa9.04□□□□□ -0.96
NEDD1-202ENST00000411739 TOMM20LQ6UXN7 152 aa9.04□□□□□ -0.96
NEDD1-202ENST00000411739 C12orf45Q8N5I9 185 aaPredicted RBP9.04□□□□□ -0.96
NEDD1-202ENST00000411739 OR4D5Q8NGN0 318 aa9.04□□□□□ -0.96
NEDD1-202ENST00000411739 NPIPB3Q92617 1050 aa9.04□□□□□ -0.96
NEDD1-202ENST00000411739 PALMDQ9NP74 551 aa9.04□□□□□ -0.96
NEDD1-202ENST00000411739 PUS1Q9Y606 427 aaKnown RBP eCLIP9.04□□□□□ -0.96
NEDD1-202ENST00000411739 IGHV3-66A0A0C4DH42 116 aa9.03□□□□□ -0.96
NEDD1-202ENST00000411739 ZNF785A8K8V0 405 aa9.03□□□□□ -0.96
NEDD1-202ENST00000411739 SSSCA1O60232 199 aa9.03□□□□□ -0.96
NEDD1-202ENST00000411739 NKX2-1P43699 371 aaPredicted RBP9.03□□□□□ -0.96
NEDD1-202ENST00000411739 ID3Q02535 119 aa9.03□□□□□ -0.96
NEDD1-202ENST00000411739 RELQ04864 619 aaPredicted RBP9.03□□□□□ -0.96
NEDD1-202ENST00000411739 SPANXN5Q5MJ07 72 aa9.03□□□□□ -0.96
NEDD1-202ENST00000411739 TMEM61Q8N0U2 210 aa9.03□□□□□ -0.96
NEDD1-202ENST00000411739 OR4X1Q8NH49 305 aa9.03□□□□□ -0.96
NEDD1-202ENST00000411739 RNASEH2CQ8TDP1 164 aaKnown RBP9.03□□□□□ -0.96
NEDD1-202ENST00000411739 ASCL2Q99929 193 aa9.03□□□□□ -0.96
NEDD1-202ENST00000411739 GAR1Q9NY12 217 aaKnown RBP9.03□□□□□ -0.96
NEDD1-202ENST00000411739 IGKV1-17P01599 117 aa9.03□□□□□ -0.96
NEDD1-202ENST00000411739 APOHP02749 345 aaPredicted RBP9.03□□□□□ -0.96
NEDD1-202ENST00000411739 LCN12Q6JVE5 192 aa9.03□□□□□ -0.96
NEDD1-202ENST00000411739 SLC16A13Q7RTY0 426 aa9.03□□□□□ -0.96
NEDD1-202ENST00000411739 Q8N1Y9 231 aa9.03□□□□□ -0.96
NEDD1-202ENST00000411739 ZBTB8BQ8NAP8 495 aaPredicted RBP9.03□□□□□ -0.96
NEDD1-202ENST00000411739 ATP6V0BQ99437 205 aa9.03□□□□□ -0.96
NEDD1-202ENST00000411739 DAZ1Q9NQZ3 744 aaKnown RBP9.03□□□□□ -0.96
NEDD1-202ENST00000411739 CACFD1Q9UGQ2 172 aa9.03□□□□□ -0.96
NEDD1-202ENST00000411739 RPS10-NUDT3A0A1W2PQS6 291 aa9.02□□□□□ -0.97
NEDD1-202ENST00000411739 C5orf51A6NDU8 294 aa9.02□□□□□ -0.97
NEDD1-202ENST00000411739 FAM90A26D6RGX4 464 aa9.02□□□□□ -0.97
NEDD1-202ENST00000411739 MED6O75586 246 aa9.02□□□□□ -0.97
NEDD1-202ENST00000411739 CD69Q07108 199 aa9.02□□□□□ -0.97
NEDD1-202ENST00000411739 MRPL27Q9P0M9 148 aaKnown RBP9.02□□□□□ -0.97
NEDD1-202ENST00000411739 IGKV3-7A0A075B6H7 116 aa9.02□□□□□ -0.97
NEDD1-202ENST00000411739 INMT-MINDY4F8WBC2 141 aa9.02□□□□□ -0.97
NEDD1-202ENST00000411739 CD7P09564 240 aa9.02□□□□□ -0.97
NEDD1-202ENST00000411739 C8orf88P0DMB2 117 aa9.02□□□□□ -0.97
NEDD1-202ENST00000411739 OR10J1P30954 320 aa9.02□□□□□ -0.97
NEDD1-202ENST00000411739 WFDC10AQ9H1F0 79 aa9.02□□□□□ -0.97
NEDD1-202ENST00000411739 SMAD5-AS1Q9Y6J3 95 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms