RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 LYZL2Q7Z4W2 148 aa14.2□□□□□ -0.14
SF3A1-202ENST00000411423 OR52E5Q8NH55 327 aa14.2□□□□□ -0.14
SF3A1-202ENST00000411423 RNF2Q99496 336 aa14.2□□□□□ -0.14
SF3A1-202ENST00000411423 ZFAND3Q9H8U3 227 aa14.2□□□□□ -0.14
SF3A1-202ENST00000411423 GAR1Q9NY12 217 aaKnown RBP14.2□□□□□ -0.14
SF3A1-202ENST00000411423 UBQLN2Q9UHD9 624 aa14.2□□□□□ -0.14
SF3A1-202ENST00000411423 RYR2Q92736 4967 aa14.2□□□□□ -0.14
SF3A1-202ENST00000411423 IGHV3OR16-13A0A075B7E8 117 aa14.19□□□□□ -0.14
SF3A1-202ENST00000411423 IGHV3-74A0A0B4J1X5 117 aa14.19□□□□□ -0.14
SF3A1-202ENST00000411423 IGHV7-4-1A0A0J9YVY3 117 aa14.19□□□□□ -0.14
SF3A1-202ENST00000411423 A0A1B0GU03 582 aa14.19□□□□□ -0.14
SF3A1-202ENST00000411423 ZNF701M0R085 212 aaPredicted RBP14.19□□□□□ -0.14
SF3A1-202ENST00000411423 YIF1AO95070 293 aa14.19□□□□□ -0.14
SF3A1-202ENST00000411423 APOHP02749 345 aaPredicted RBP14.19□□□□□ -0.14
SF3A1-202ENST00000411423 NMSQ5H8A3 153 aa14.19□□□□□ -0.14
SF3A1-202ENST00000411423 TOMM5Q8N4H5 51 aa14.19□□□□□ -0.14
SF3A1-202ENST00000411423 DUSP18Q8NEJ0 188 aa14.19□□□□□ -0.14
SF3A1-202ENST00000411423 IL22RA2Q969J5 263 aa14.19□□□□□ -0.14
SF3A1-202ENST00000411423 SPAG8Q99932 426 aaPredicted RBP14.19□□□□□ -0.14
SF3A1-202ENST00000411423 SRRQ9GZT4 340 aa14.19□□□□□ -0.14
SF3A1-202ENST00000411423 C3orf84H3BNL1 204 aa14.18□□□□□ -0.14
SF3A1-202ENST00000411423 ODF3L2Q3SX64 289 aa14.18□□□□□ -0.14
SF3A1-202ENST00000411423 CASC10Q5T4H9 136 aa14.18□□□□□ -0.14
SF3A1-202ENST00000411423 LILRB2Q8N423 598 aa14.18□□□□□ -0.14
SF3A1-202ENST00000411423 RHPN1-AS1Q9BWJ2 59 aa14.18□□□□□ -0.14
SF3A1-202ENST00000411423 ENY2Q9NPA8 101 aa14.18□□□□□ -0.14
SF3A1-202ENST00000411423 S100A5P33763 92 aa14.17□□□□□ -0.14
SF3A1-202ENST00000411423 SUB1P53999 127 aaKnown RBP eCLIP14.17□□□□□ -0.14
SF3A1-202ENST00000411423 FAM90A2PQ658T7 463 aa14.17□□□□□ -0.14
SF3A1-202ENST00000411423 TMEM116Q8NCL8 245 aa14.17□□□□□ -0.14
SF3A1-202ENST00000411423 SDHCQ99643 169 aaPredicted RBP14.17□□□□□ -0.14
SF3A1-202ENST00000411423 KCNIP3Q9Y2W7 256 aa14.17□□□□□ -0.14
SF3A1-202ENST00000411423 PUS1Q9Y606 427 aaKnown RBP eCLIP14.17□□□□□ -0.14
SF3A1-202ENST00000411423 CORTO00230 105 aa14.16□□□□□ -0.14
SF3A1-202ENST00000411423 SULT1A3P0DMM9 295 aa14.16□□□□□ -0.14
SF3A1-202ENST00000411423 SULT1A4P0DMN0 295 aa14.16□□□□□ -0.14
SF3A1-202ENST00000411423 OPRK1P41145 380 aa14.16□□□□□ -0.14
SF3A1-202ENST00000411423 NPBWR1P48145 328 aa14.16□□□□□ -0.14
SF3A1-202ENST00000411423 BAK1Q16611 211 aa14.16□□□□□ -0.14
SF3A1-202ENST00000411423 ANKRD55Q3KP44 614 aa14.16□□□□□ -0.14
SF3A1-202ENST00000411423 C2orf83Q53S99 150 aa14.16□□□□□ -0.14
SF3A1-202ENST00000411423 TMED4Q7Z7H5 227 aa14.16□□□□□ -0.14
SF3A1-202ENST00000411423 SCGB3A2Q96PL1 93 aa14.16□□□□□ -0.14
SF3A1-202ENST00000411423 TRAV14DV4A0A0A6YYC5 116 aa14.15□□□□□ -0.14
SF3A1-202ENST00000411423 A0A0B4J2A0 478 aa14.15□□□□□ -0.14
SF3A1-202ENST00000411423 IGHV3-66A0A0C4DH42 116 aa14.15□□□□□ -0.14
SF3A1-202ENST00000411423 CEBPZOSA8MTT3 80 aa14.15□□□□□ -0.14
SF3A1-202ENST00000411423 CLN5O75503 358 aa14.15□□□□□ -0.14
SF3A1-202ENST00000411423 IGKV1-17P01599 117 aa14.15□□□□□ -0.14
SF3A1-202ENST00000411423 FAUP35544 74 aaKnown RBP14.15□□□□□ -0.14
SF3A1-202ENST00000411423 HTR2BP41595 481 aa14.15□□□□□ -0.14
SF3A1-202ENST00000411423 ZNF600Q6ZNG1 722 aa14.15□□□□□ -0.14
SF3A1-202ENST00000411423 OR4X1Q8NH49 305 aa14.15□□□□□ -0.14
SF3A1-202ENST00000411423 ST8SIA2Q92186 375 aa14.15□□□□□ -0.14
SF3A1-202ENST00000411423 HEYLQ9NQ87 328 aaPredicted RBP14.15□□□□□ -0.14
SF3A1-202ENST00000411423 SHPKQ9UHJ6 478 aa14.15□□□□□ -0.14
SF3A1-202ENST00000411423 IGKV3-7A0A075B6H7 116 aa14.14□□□□□ -0.15
SF3A1-202ENST00000411423 AP3S2P59780 193 aa14.14□□□□□ -0.15
SF3A1-202ENST00000411423 ZNF124Q15973 351 aa14.14□□□□□ -0.15
SF3A1-202ENST00000411423 TIGITQ495A1 244 aa14.14□□□□□ -0.15
SF3A1-202ENST00000411423 ZFAND6Q6FIF0 208 aa14.14□□□□□ -0.15
SF3A1-202ENST00000411423 LAMTOR1Q6IAA8 161 aa14.14□□□□□ -0.15
SF3A1-202ENST00000411423 LGI3Q8N145 548 aa14.14□□□□□ -0.15
SF3A1-202ENST00000411423 SLC24A4Q8NFF2 622 aa14.14□□□□□ -0.15
SF3A1-202ENST00000411423 GGTLC1Q9BX51 225 aa14.14□□□□□ -0.15
SF3A1-202ENST00000411423 VSIRQ9H7M9 311 aa14.14□□□□□ -0.15
SF3A1-202ENST00000411423 HSPB7Q9UBY9 170 aa14.14□□□□□ -0.15
SF3A1-202ENST00000411423 LOC102724200A0A096LPH7 203 aaPredicted RBP14.13□□□□□ -0.15
SF3A1-202ENST00000411423 TFPI2P48307 235 aa14.13□□□□□ -0.15
SF3A1-202ENST00000411423 CCR6P51684 374 aa14.13□□□□□ -0.15
SF3A1-202ENST00000411423 TNFRSF9Q07011 255 aa14.13□□□□□ -0.15
SF3A1-202ENST00000411423 SMCO1Q147U7 214 aa14.13□□□□□ -0.15
SF3A1-202ENST00000411423 PRSS54Q6PEW0 395 aa14.13□□□□□ -0.15
SF3A1-202ENST00000411423 RBKSQ9H477 322 aa14.13□□□□□ -0.15
SF3A1-202ENST00000411423 PITX3O75364 302 aa14.12□□□□□ -0.15
SF3A1-202ENST00000411423 IGLC1P0CG04 106 aa14.12□□□□□ -0.15
SF3A1-202ENST00000411423 LYL1P12980 280 aa14.12□□□□□ -0.15
SF3A1-202ENST00000411423 PPP1R1AQ13522 171 aa14.12□□□□□ -0.15
SF3A1-202ENST00000411423 TMEM128Q5BJH2 165 aa14.12□□□□□ -0.15
SF3A1-202ENST00000411423 APRG1Q8IVJ8 170 aa14.12□□□□□ -0.15
SF3A1-202ENST00000411423 GBGT1Q8N5D6 347 aa14.12□□□□□ -0.15
SF3A1-202ENST00000411423 LYSTQ99698 3801 aa14.11□□□□□ -0.15
SF3A1-202ENST00000411423 NPY1RP25929 384 aa14.11□□□□□ -0.15
SF3A1-202ENST00000411423 RND2P52198 227 aa14.11□□□□□ -0.15
SF3A1-202ENST00000411423 SPANXN2Q5MJ10 180 aa14.11□□□□□ -0.15
SF3A1-202ENST00000411423 TCF24Q7RTU0 167 aa14.11□□□□□ -0.15
SF3A1-202ENST00000411423 SLC25A21Q9BQT8 299 aaPredicted RBP14.11□□□□□ -0.15
SF3A1-202ENST00000411423 OVOL2Q9BRP0 275 aa14.11□□□□□ -0.15
SF3A1-202ENST00000411423 GINS3Q9BRX5 216 aa14.11□□□□□ -0.15
SF3A1-202ENST00000411423 OR4C46A6NHA9 309 aa14.1□□□□□ -0.15
SF3A1-202ENST00000411423 DFFBO76075 338 aa14.1□□□□□ -0.15
SF3A1-202ENST00000411423 SFT2D2O95562 160 aa14.1□□□□□ -0.15
SF3A1-202ENST00000411423 ANXA3P12429 323 aa14.1□□□□□ -0.15
SF3A1-202ENST00000411423 VAMP1P23763 118 aa14.1□□□□□ -0.15
SF3A1-202ENST00000411423 FAM24BQ8N5W8 94 aa14.1□□□□□ -0.15
SF3A1-202ENST00000411423 LRTM2Q8N967 370 aa14.1□□□□□ -0.15
SF3A1-202ENST00000411423 RNASEH2CQ8TDP1 164 aaKnown RBP14.1□□□□□ -0.15
SF3A1-202ENST00000411423 DTD1Q8TEA8 209 aa14.1□□□□□ -0.15
SF3A1-202ENST00000411423 DEDD2Q8WXF8 326 aa14.1□□□□□ -0.15
SF3A1-202ENST00000411423 FLVCR2Q9UPI3 526 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms