RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 TMEM170AQ8WVE7 144 aa23.57■■□□□ 1.36
TRAF3IP1-203ENST00000409739 HIPK2Q9H2X6 1198 aa23.57■■□□□ 1.36
TRAF3IP1-203ENST00000409739 COL7A1Q02388 2944 aa23.57■■□□□ 1.36
TRAF3IP1-203ENST00000409739 GNG7O60262 68 aa23.56■■□□□ 1.36
TRAF3IP1-203ENST00000409739 ZNF846Q147U1 533 aa23.56■■□□□ 1.36
TRAF3IP1-203ENST00000409739 DUSP18Q8NEJ0 188 aa23.56■■□□□ 1.36
TRAF3IP1-203ENST00000409739 DTD1Q8TEA8 209 aa23.56■■□□□ 1.36
TRAF3IP1-203ENST00000409739 TECRQ9NZ01 308 aaKnown RBP23.56■■□□□ 1.36
TRAF3IP1-203ENST00000409739 TBC1D24Q9ULP9 559 aa23.56■■□□□ 1.36
TRAF3IP1-203ENST00000409739 NPY1RP25929 384 aa23.55■■□□□ 1.36
TRAF3IP1-203ENST00000409739 RELQ04864 619 aaPredicted RBP23.55■■□□□ 1.36
TRAF3IP1-203ENST00000409739 C4orf46Q504U0 113 aa23.55■■□□□ 1.36
TRAF3IP1-203ENST00000409739 GGNBP1Q5YKI7 109 aa23.55■■□□□ 1.36
TRAF3IP1-203ENST00000409739 UXS1Q8NBZ7 420 aa23.55■■□□□ 1.36
TRAF3IP1-203ENST00000409739 B9D2Q9BPU9 175 aa23.55■■□□□ 1.36
TRAF3IP1-203ENST00000409739 MRPL36Q9P0J6 103 aaKnown RBP23.55■■□□□ 1.36
TRAF3IP1-203ENST00000409739 SMAD5-AS1Q9Y6J3 95 aa23.55■■□□□ 1.36
TRAF3IP1-203ENST00000409739 TCRBP04435 133 aa23.54■■□□□ 1.36
TRAF3IP1-203ENST00000409739 C8orf88P0DMB2 117 aa23.54■■□□□ 1.36
TRAF3IP1-203ENST00000409739 NPBWR1P48145 328 aa23.54■■□□□ 1.36
TRAF3IP1-203ENST00000409739 COQ8AQ8NI60 647 aa23.54■■□□□ 1.36
TRAF3IP1-203ENST00000409739 MARC2Q969Z3 335 aa23.54■■□□□ 1.36
TRAF3IP1-203ENST00000409739 MLXQ9UH92 298 aa23.54■■□□□ 1.36
TRAF3IP1-203ENST00000409739 SELENOKQ9Y6D0 94 aa23.54■■□□□ 1.36
TRAF3IP1-203ENST00000409739 IGHV3OR16-8A0A075B7F1 116 aa23.53■■□□□ 1.36
TRAF3IP1-203ENST00000409739 MLANAQ16655 118 aa23.53■■□□□ 1.36
TRAF3IP1-203ENST00000409739 DAZ1Q9NQZ3 744 aaKnown RBP23.53■■□□□ 1.36
TRAF3IP1-203ENST00000409739 ADAP1O75689 374 aa23.52■■□□□ 1.36
TRAF3IP1-203ENST00000409739 RNASEH2CQ8TDP1 164 aaKnown RBP23.52■■□□□ 1.36
TRAF3IP1-203ENST00000409739 C20orf24Q9BUV8 137 aa23.52■■□□□ 1.36
TRAF3IP1-203ENST00000409739 MRPL27Q9P0M9 148 aaKnown RBP23.52■■□□□ 1.36
TRAF3IP1-203ENST00000409739 DNAH9Q9NYC9 4486 aa23.51■■□□□ 1.35
TRAF3IP1-203ENST00000409739 TRAV6A0A075B6T7 132 aa23.51■■□□□ 1.35
TRAF3IP1-203ENST00000409739 FAM90A26D6RGX4 464 aa23.51■■□□□ 1.35
TRAF3IP1-203ENST00000409739 UPK1BO75841 260 aa23.51■■□□□ 1.35
TRAF3IP1-203ENST00000409739 CD69Q07108 199 aa23.51■■□□□ 1.35
TRAF3IP1-203ENST00000409739 ASAH1Q13510 395 aa23.51■■□□□ 1.35
TRAF3IP1-203ENST00000409739 BTNL8Q6UX41 500 aa23.51■■□□□ 1.35
TRAF3IP1-203ENST00000409739 Q8N1Y9 231 aa23.51■■□□□ 1.35
TRAF3IP1-203ENST00000409739 OR52B4Q8NGK2 314 aa23.51■■□□□ 1.35
TRAF3IP1-203ENST00000409739 OR4X1Q8NH49 305 aa23.51■■□□□ 1.35
TRAF3IP1-203ENST00000409739 NUDT15Q9NV35 164 aa23.51■■□□□ 1.35
TRAF3IP1-203ENST00000409739 U3KQ87 197 aa23.51■■□□□ 1.35
TRAF3IP1-203ENST00000409739 RPS10-NUDT3A0A1W2PQS6 291 aa23.5■■□□□ 1.35
TRAF3IP1-203ENST00000409739 TMEM50AO95807 157 aa23.5■■□□□ 1.35
TRAF3IP1-203ENST00000409739 IFNA10P01566 189 aa23.5■■□□□ 1.35
TRAF3IP1-203ENST00000409739 NOXA1Q86UR1 476 aa23.5■■□□□ 1.35
TRAF3IP1-203ENST00000409739 C15orf62A8K5M9 175 aa23.49■■□□□ 1.35
TRAF3IP1-203ENST00000409739 MPTX1A8MV57 137 aa23.49■■□□□ 1.35
TRAF3IP1-203ENST00000409739 ZNF207O43670 478 aaKnown RBP23.49■■□□□ 1.35
TRAF3IP1-203ENST00000409739 CLN5O75503 358 aa23.49■■□□□ 1.35
TRAF3IP1-203ENST00000409739 TMEM61Q8N0U2 210 aa23.49■■□□□ 1.35
TRAF3IP1-203ENST00000409739 WDR89Q96FK6 387 aaPredicted RBP23.49■■□□□ 1.35
TRAF3IP1-203ENST00000409739 ZNF785A8K8V0 405 aa23.48■■□□□ 1.35
TRAF3IP1-203ENST00000409739 K7EMT4 169 aa23.48■■□□□ 1.35
TRAF3IP1-203ENST00000409739 MZT2BQ6NZ67 158 aa23.48■■□□□ 1.35
TRAF3IP1-203ENST00000409739 OR10C1Q96KK4 312 aa23.48■■□□□ 1.35
TRAF3IP1-203ENST00000409739 FAM240BA0A1B0GVZ2 78 aa23.47■■□□□ 1.35
TRAF3IP1-203ENST00000409739 YIF1AO95070 293 aa23.47■■□□□ 1.35
TRAF3IP1-203ENST00000409739 IAPPP10997 89 aa23.47■■□□□ 1.35
TRAF3IP1-203ENST00000409739 GTSCR1Q86UQ5 136 aa23.47■■□□□ 1.35
TRAF3IP1-203ENST00000409739 MITD1Q8WV92 249 aa23.47■■□□□ 1.35
TRAF3IP1-203ENST00000409739 MED6O75586 246 aa23.46■■□□□ 1.35
TRAF3IP1-203ENST00000409739 SLC25A4P12235 298 aa23.46■■□□□ 1.35
TRAF3IP1-203ENST00000409739 IFITM3Q01628 133 aa23.46■■□□□ 1.35
TRAF3IP1-203ENST00000409739 PRSS54Q6PEW0 395 aa23.46■■□□□ 1.35
TRAF3IP1-203ENST00000409739 ZNF600Q6ZNG1 722 aa23.46■■□□□ 1.35
TRAF3IP1-203ENST00000409739 MAGT1Q9H0U3 335 aa23.46■■□□□ 1.35
TRAF3IP1-203ENST00000409739 IFNA21P01568 189 aa23.45■■□□□ 1.34
TRAF3IP1-203ENST00000409739 RND2P52198 227 aa23.45■■□□□ 1.34
TRAF3IP1-203ENST00000409739 GUCA2BQ16661 112 aa23.45■■□□□ 1.34
TRAF3IP1-203ENST00000409739 SYNGR2O43760 224 aa23.44■■□□□ 1.34
TRAF3IP1-203ENST00000409739 H2AFB2P0C5Z0 115 aa23.44■■□□□ 1.34
TRAF3IP1-203ENST00000409739 ATP5IP56385 69 aaPredicted RBP23.44■■□□□ 1.34
TRAF3IP1-203ENST00000409739 ETFRF1Q6IPR1 90 aa23.44■■□□□ 1.34
TRAF3IP1-203ENST00000409739 TOMM20LQ6UXN7 152 aa23.44■■□□□ 1.34
TRAF3IP1-203ENST00000409739 ZFAND3Q9H8U3 227 aa23.44■■□□□ 1.34
TRAF3IP1-203ENST00000409739 PUS1Q9Y606 427 aaKnown RBP eCLIP23.44■■□□□ 1.34
TRAF3IP1-203ENST00000409739 IGKV1-17P01599 117 aa23.43■■□□□ 1.34
TRAF3IP1-203ENST00000409739 IGHV4-30-4P0DP06 118 aa23.43■■□□□ 1.34
TRAF3IP1-203ENST00000409739 SLC16A13Q7RTY0 426 aa23.43■■□□□ 1.34
TRAF3IP1-203ENST00000409739 TMEM116Q8NCL8 245 aa23.43■■□□□ 1.34
TRAF3IP1-203ENST00000409739 SEC22CQ9BRL7 303 aa23.43■■□□□ 1.34
TRAF3IP1-203ENST00000409739 SCGB2A1O75556 95 aa23.42■■□□□ 1.34
TRAF3IP1-203ENST00000409739 SCAF4O95104 1147 aaKnown RBP23.42■■□□□ 1.34
TRAF3IP1-203ENST00000409739 IFNA4P05014 189 aa23.42■■□□□ 1.34
TRAF3IP1-203ENST00000409739 FRMD6-AS1P0C7T7 363 aa23.42■■□□□ 1.34
TRAF3IP1-203ENST00000409739 CD81P60033 236 aa23.42■■□□□ 1.34
TRAF3IP1-203ENST00000409739 OR4D5Q8NGN0 318 aa23.42■■□□□ 1.34
TRAF3IP1-203ENST00000409739 CIB3Q96Q77 187 aaPredicted RBP23.42■■□□□ 1.34
TRAF3IP1-203ENST00000409739 SMPXQ9UHP9 88 aa23.42■■□□□ 1.34
TRAF3IP1-203ENST00000409739 TRAV30A0A087WSZ9 112 aa23.41■■□□□ 1.34
TRAF3IP1-203ENST00000409739 TRAV25A0A0B4J276 109 aa23.41■■□□□ 1.34
TRAF3IP1-203ENST00000409739 IGHV7-4-1A0A0J9YVY3 117 aa23.41■■□□□ 1.34
TRAF3IP1-203ENST00000409739 IGLC1P0CG04 106 aa23.41■■□□□ 1.34
TRAF3IP1-203ENST00000409739 TIGITQ495A1 244 aa23.41■■□□□ 1.34
TRAF3IP1-203ENST00000409739 ZNF431Q8TF32 576 aaPredicted RBP23.41■■□□□ 1.34
TRAF3IP1-203ENST00000409739 GINS3Q9BRX5 216 aa23.41■■□□□ 1.34
TRAF3IP1-203ENST00000409739 WRBO00258 174 aa23.4■■□□□ 1.34
TRAF3IP1-203ENST00000409739 CD7P09564 240 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms