RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 NHLRC4P0CG21 123 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 HTR1DP28221 377 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 AKR1C3P42330 323 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 RAB5BP61020 215 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 MEF2CQ06413 473 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 UTF1Q5T230 341 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 OR8G2PQ6IF36 304 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 SLC35E3Q7Z769 313 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 OR10P1Q8NGE3 313 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 OR52E5Q8NH55 327 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 P2RX4Q99571 388 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 SAV1Q9H4B6 383 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 VSIRQ9H7M9 311 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 GFOD1Q9NXC2 390 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 PRELID1Q9Y255 219 aa9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 PUS1Q9Y606 427 aaKnown RBP eCLIP9.97□□□□□ -0.81
CHRNA1-205ENST00000409542 KBTBD11-OT1A0A1B0GTJ5 212 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 CEBPZOSA8MTT3 80 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 C1orf196B1AJZ1 125 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 C3orf84H3BNL1 204 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 FCGR3BO75015 233 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 HOXA1P49639 335 aaPredicted RBP9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 SPCS3P61009 180 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 ERVK-16P61578 105 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 LTC4SQ16873 150 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 C17orf58Q2M2W7 97 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 KIAA2026Q5HYC2 2103 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 PRAMEF5Q5TYX0 476 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 ZNF429Q86V71 674 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 ABHD12Q8N2K0 398 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 CYB561D1Q8N8Q1 229 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 TVP23CQ96ET8 276 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 NOL4LQ96MY1 436 aaPredicted RBP9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 YPEL4Q96NS1 127 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 PRR25Q96S07 402 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 C20orf24Q9BUV8 137 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 GPR61Q9BZJ8 451 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 LINC00574Q9H8X3 128 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 GNG13Q9P2W3 67 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 DPM3Q9P2X0 92 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 LINC00312Q9Y6C7 94 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 LYSTQ99698 3801 aa9.96□□□□□ -0.82
CHRNA1-205ENST00000409542 TRGV10A0A0A0MS01 117 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 hADV38S2A0JD32 116 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 PSMB11A5LHX3 300 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 MAP1LC3B2A6NCE7 125 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 C15orf62A8K5M9 175 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 SOX15O60248 233 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 OR9G9P0C7N8 305 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 RAB5AP20339 215 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 TAGLN2P37802 199 aaKnown RBP9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 RPP30P78346 268 aaKnown RBP9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 LCN15Q6UWW0 184 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 SSX7Q7RTT5 188 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 DDB2Q92466 427 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 CORO2AQ92828 525 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 ADTRPQ96IZ2 230 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 S1PR3Q99500 378 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 NIPSNAP3BQ9BS92 247 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 QTRT1Q9BXR0 403 aaKnown RBP9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 MAP1LC3BQ9GZQ8 125 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 VAX2Q9UIW0 290 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 LINC00527Q9UJ94 153 aa9.95□□□□□ -0.82
CHRNA1-205ENST00000409542 CTXND1A0A1B0GTU2 59 aa9.94□□□□□ -0.82
CHRNA1-205ENST00000409542 ZNF729A6NN14 1252 aaPredicted RBP9.94□□□□□ -0.82
CHRNA1-205ENST00000409542 B4DEV8 164 aa9.94□□□□□ -0.82
CHRNA1-205ENST00000409542 RBMXL2O75526 392 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-205ENST00000409542 IGLV1-47P01700 117 aa9.94□□□□□ -0.82
CHRNA1-205ENST00000409542 IFNA4P05014 189 aa9.94□□□□□ -0.82
CHRNA1-205ENST00000409542 NQO2P16083 231 aa9.94□□□□□ -0.82
CHRNA1-205ENST00000409542 FGF7P21781 194 aa9.94□□□□□ -0.82
CHRNA1-205ENST00000409542 MYCNOSP40205 109 aa9.94□□□□□ -0.82
CHRNA1-205ENST00000409542 ELLP55199 621 aaPredicted RBP9.94□□□□□ -0.82
CHRNA1-205ENST00000409542 OR4S2Q8NH73 311 aa9.94□□□□□ -0.82
CHRNA1-205ENST00000409542 MCRIP2Q9BUT9 160 aaKnown RBP9.94□□□□□ -0.82
CHRNA1-205ENST00000409542 GGACTQ9BVM4 153 aa9.94□□□□□ -0.82
CHRNA1-205ENST00000409542 DNAH1Q9P2D7 4330 aa9.94□□□□□ -0.82
CHRNA1-205ENST00000409542 CXorf65A6NEN9 183 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 C17orf112F2Z3M2 114 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 LY6LH3BQJ8 138 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 OR2C1O95371 312 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 BRS3P32247 399 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 ZNF134P52741 427 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 LINC00205P59089 165 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 PNRC1Q12796 327 aaPredicted RBP9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 RPL39P5Q59GN2 51 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 CASC10Q5T4H9 136 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 FAM90A2PQ658T7 463 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 ACSM6Q6P461 480 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 LINC00518Q8N0U6 118 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 ZNF439Q8NDP4 499 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 KLHL30-AS1Q8NEE0 82 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 OR4A16Q8NH70 328 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 ISOC2Q96AB3 205 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 ZNF251Q9BRH9 671 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 SLC39A9Q9NUM3 307 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 IDI2-AS1Q9NZ38 188 aa9.93□□□□□ -0.82
CHRNA1-205ENST00000409542 STARD9Q9P2P6 4700 aa9.92□□□□□ -0.82
CHRNA1-205ENST00000409542 SLC31A2O15432 143 aa9.92□□□□□ -0.82
CHRNA1-205ENST00000409542 IGKV1D-33P01593 117 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms