RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 MANBALQ9NQG1 85 aa12.29□□□□□ -0.44
SCAMP4-202ENST00000409472 BET1LQ9NYM9 111 aa12.29□□□□□ -0.44
SCAMP4-202ENST00000409472 KAAG1Q9UBP8 84 aa12.29□□□□□ -0.44
SCAMP4-202ENST00000409472 CGB1A6NKQ9 187 aa12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 C11orf94C9JXX5 98 aa12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 MPDU1O75352 247 aa12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 GATA2P23769 480 aaPredicted RBP12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 TFPI2P48307 235 aa12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 KLRB1Q12918 225 aa12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 CYP2G1PQ6ZSU1 146 aa12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 OR2D3Q8NGH3 330 aa12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 VAMP8Q9BV40 100 aa12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 NPVFQ9HCQ7 196 aa12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 A0A1W2PPV4 95 aa12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 HSBP1L1C9JCN9 74 aa12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 CCL25O15444 150 aa12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 APOA2P02652 100 aa12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 RPL23P62829 140 aaKnown RBP12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 TEPPQ6URK8 271 aa12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 ST6GALNAC3Q8NDV1 305 aa12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 ZNF257Q9Y2Q1 563 aa12.28□□□□□ -0.44
SCAMP4-202ENST00000409472 IGLV2-23P01705 113 aa12.27□□□□□ -0.44
SCAMP4-202ENST00000409472 TYMSP04818 313 aa12.27□□□□□ -0.44
SCAMP4-202ENST00000409472 RNASE2P10153 161 aaKnown RBP12.27□□□□□ -0.44
SCAMP4-202ENST00000409472 FBXL19-AS1Q494R0 122 aa12.27□□□□□ -0.44
SCAMP4-202ENST00000409472 NECAP1Q8NC96 275 aa12.27□□□□□ -0.44
SCAMP4-202ENST00000409472 OSR1Q8TAX0 266 aaPredicted RBP12.27□□□□□ -0.44
SCAMP4-202ENST00000409472 BTF3L4Q96K17 158 aa12.27□□□□□ -0.44
SCAMP4-202ENST00000409472 ALKBH7Q9BT30 221 aaPredicted RBP12.27□□□□□ -0.44
SCAMP4-202ENST00000409472 PGPEP1LA6NFU8 196 aa12.27□□□□□ -0.45
SCAMP4-202ENST00000409472 TMEM250H0YL14 139 aa12.27□□□□□ -0.45
SCAMP4-202ENST00000409472 FOXH1O75593 365 aa12.27□□□□□ -0.45
SCAMP4-202ENST00000409472 UCNP55089 124 aa12.27□□□□□ -0.45
SCAMP4-202ENST00000409472 GNB1P62873 340 aa12.27□□□□□ -0.45
SCAMP4-202ENST00000409472 UBE2V1Q13404 147 aa12.27□□□□□ -0.45
SCAMP4-202ENST00000409472 TMEM177Q53S58 311 aa12.27□□□□□ -0.45
SCAMP4-202ENST00000409472 CST9LP1Q5W188 147 aa12.27□□□□□ -0.45
SCAMP4-202ENST00000409472 NUDT10Q8NFP7 164 aa12.27□□□□□ -0.45
SCAMP4-202ENST00000409472 ZNF596Q8TC21 504 aa12.27□□□□□ -0.45
SCAMP4-202ENST00000409472 RAB1CQ92928 201 aa12.27□□□□□ -0.45
SCAMP4-202ENST00000409472 FLYWCH2Q96CP2 140 aaKnown RBP12.27□□□□□ -0.45
SCAMP4-202ENST00000409472 PCGF1Q9BSM1 259 aa12.27□□□□□ -0.45
SCAMP4-202ENST00000409472 ACTL6BO94805 426 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 IGHV3-48P01763 117 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 C1QTNF9P0C862 333 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 STAG3L2P0CL84 134 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 STAG3L3P0CL85 134 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 RNF151Q2KHN1 245 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 BSXQ3C1V8 233 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 ZNF672Q499Z4 452 aaPredicted RBP12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 CLEC2AQ6UVW9 174 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 ZNF841Q6ZN19 808 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 OR9G1Q8NH87 305 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 NEIL1Q96FI4 390 aaPredicted RBP12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 RPL8P62917 257 aaKnown RBP12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 SSBP2P81877 361 aaPredicted RBP12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 PRR20EP86478 221 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 PRR20CP86479 221 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 PRR20DP86480 221 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 PRR20BP86481 221 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 PRR20AP86496 221 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 WT1-ASQ06250 92 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 LY6DQ14210 128 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 MRGPRG-AS1Q2M3A8 158 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 C19orf35Q6ZS72 473 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 OR5T1Q8NG75 326 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 OR2T10Q8NGZ9 312 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 IGFBPL1Q8WX77 278 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 ZNF430Q9H8G1 570 aaPredicted RBP12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 NDUFA4L2Q9NRX3 87 aa12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 YTHDF2Q9Y5A9 579 aaKnown RBP12.26□□□□□ -0.45
SCAMP4-202ENST00000409472 COL12A1Q99715 3063 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 SLC25A17O43808 307 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 LINC00869P0C866 280 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 CNTFRP26992 372 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 SRP14P37108 136 aaKnown RBP12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 KCNIP4Q6PIL6 250 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 LINC00311Q8N616 119 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 OR5B3Q8NH48 314 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 ANAPC16Q96DE5 110 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 TMEM133Q9H2Q1 129 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 PAM16Q9Y3D7 125 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 REG1AP05451 166 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 OR5G3P0C626 314 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 PAFAH1B2P68402 229 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 CLEC12BQ2HXU8 276 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 MIR17HGQ75NE6 70 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 ZNF114Q8NC26 417 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 COMMD5Q9GZQ3 224 aa12.25□□□□□ -0.45
SCAMP4-202ENST00000409472 TRBV20OR9-2A0A075B6H5 130 aa12.24□□□□□ -0.45
SCAMP4-202ENST00000409472 TMEM238LA0A1B0GVL6 79 aa12.24□□□□□ -0.45
SCAMP4-202ENST00000409472 LGALS4P56470 323 aa12.24□□□□□ -0.45
SCAMP4-202ENST00000409472 TPPP2P59282 170 aa12.24□□□□□ -0.45
SCAMP4-202ENST00000409472 LCN2P80188 198 aa12.24□□□□□ -0.45
SCAMP4-202ENST00000409472 OR4C13Q8NGP0 309 aa12.24□□□□□ -0.45
SCAMP4-202ENST00000409472 TMEM186Q96B77 213 aa12.24□□□□□ -0.45
SCAMP4-202ENST00000409472 IGHV2-26A0A0B4J1V2 119 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 NDUFB4O95168 129 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 TOMM40O96008 361 aa12.23□□□□□ -0.45
SCAMP4-202ENST00000409472 APELAP0DMC3 54 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms