RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 MFSD2BA6NFX1 497 aa13.13□□□□□ -0.31
SSB-202ENST00000409333 FNDC10F2Z333 226 aa13.13□□□□□ -0.31
SSB-202ENST00000409333 IFNA5P01569 189 aa13.13□□□□□ -0.31
SSB-202ENST00000409333 IGLV1-40P01703 118 aa13.13□□□□□ -0.31
SSB-202ENST00000409333 TPT1P13693 172 aaKnown RBP13.13□□□□□ -0.31
SSB-202ENST00000409333 HIST1H1BP16401 226 aaKnown RBP13.13□□□□□ -0.31
SSB-202ENST00000409333 MDKP21741 143 aaPredicted RBP13.13□□□□□ -0.31
SSB-202ENST00000409333 ETFRF1Q6IPR1 90 aa13.13□□□□□ -0.31
SSB-202ENST00000409333 SCARB1Q8WTV0 552 aa13.13□□□□□ -0.31
SSB-202ENST00000409333 NPVFQ9HCQ7 196 aa13.13□□□□□ -0.31
SSB-202ENST00000409333 THYN1Q9P016 225 aa13.13□□□□□ -0.31
SSB-202ENST00000409333 RFNGQ9Y644 331 aa13.13□□□□□ -0.31
SSB-202ENST00000409333 IGKV1OR2-108A0A075B7D4 117 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 FGF7P21781 194 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 RND2P52198 227 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 IFITM2Q01629 132 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 LCNL1Q6ZST4 164 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 BAP18Q8IXM2 172 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 GON7Q9BXV9 100 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 SH3BGRL3Q9H299 93 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 ARV1Q9H2C2 271 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 KLK15Q9H2R5 256 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 WDR83OSQ9Y284 106 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 IGHV3-23P01764 117 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 TRGV3P03979 118 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 PF4V1P10720 104 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 C15orf32Q32M92 178 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 BTNL8Q6UX41 500 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 NECAP1Q8NC96 275 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 NPIPB3Q92617 1050 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 GINS3Q9BRX5 216 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 RSG1Q9BU20 258 aa13.12□□□□□ -0.31
SSB-202ENST00000409333 PARD6GQ9BYG4 376 aaPredicted RBP13.12□□□□□ -0.31
SSB-202ENST00000409333 LSM4Q9Y4Z0 139 aaKnown RBP13.12□□□□□ -0.31
SSB-202ENST00000409333 C2CD3Q4AC94 2353 aa13.11□□□□□ -0.31
SSB-202ENST00000409333 PSMB11A5LHX3 300 aa13.11□□□□□ -0.31
SSB-202ENST00000409333 H3BUA1 57 aa13.11□□□□□ -0.31
SSB-202ENST00000409333 IGHG4P01861 327 aa13.11□□□□□ -0.31
SSB-202ENST00000409333 ATP6V0CP27449 155 aa13.11□□□□□ -0.31
SSB-202ENST00000409333 TPPP2P59282 170 aa13.11□□□□□ -0.31
SSB-202ENST00000409333 ACSM6Q6P461 480 aa13.11□□□□□ -0.31
SSB-202ENST00000409333 TEPPQ6URK8 271 aa13.11□□□□□ -0.31
SSB-202ENST00000409333 TMEM144Q7Z5S9 345 aa13.11□□□□□ -0.31
SSB-202ENST00000409333 SCGB1C1Q8TD33 95 aa13.11□□□□□ -0.31
SSB-202ENST00000409333 MGST2Q99735 147 aa13.11□□□□□ -0.31
SSB-202ENST00000409333 NPCDR1Q9BY65 106 aa13.11□□□□□ -0.31
SSB-202ENST00000409333 BRI3O95415 125 aa13.1□□□□□ -0.31
SSB-202ENST00000409333 EIF5AP63241 154 aaKnown RBP13.1□□□□□ -0.31
SSB-202ENST00000409333 TEX261Q6UWH6 196 aa13.1□□□□□ -0.31
SSB-202ENST00000409333 ALKAL2Q6UX46 152 aa13.1□□□□□ -0.31
SSB-202ENST00000409333 TMEM116Q8NCL8 245 aa13.1□□□□□ -0.31
SSB-202ENST00000409333 SLC25A32Q9H2D1 315 aa13.1□□□□□ -0.31
SSB-202ENST00000409333 SETD2Q9BYW2 2564 aaPredicted RBP13.1□□□□□ -0.31
SSB-202ENST00000409333 PSMB8P28062 276 aa13.09□□□□□ -0.31
SSB-202ENST00000409333 OR4X1Q8NH49 305 aa13.09□□□□□ -0.31
SSB-202ENST00000409333 TMED6Q8WW62 240 aa13.09□□□□□ -0.31
SSB-202ENST00000409333 SLA2Q9H6Q3 261 aa13.09□□□□□ -0.31
SSB-202ENST00000409333 IGKV1D-37A0A075B6S9 117 aa13.09□□□□□ -0.31
SSB-202ENST00000409333 FAM223BA6NKX1 122 aa13.09□□□□□ -0.31
SSB-202ENST00000409333 F8W735 103 aaPredicted RBP13.09□□□□□ -0.31
SSB-202ENST00000409333 RAB9AP51151 201 aa13.09□□□□□ -0.31
SSB-202ENST00000409333 SLC35B1P78383 322 aa13.09□□□□□ -0.31
SSB-202ENST00000409333 CENPVQ7Z7K6 275 aaPredicted RBP13.09□□□□□ -0.31
SSB-202ENST00000409333 FAM223AQ8IWN6 122 aa13.09□□□□□ -0.31
SSB-202ENST00000409333 VN1R17PQ8TDU5 208 aa13.09□□□□□ -0.31
SSB-202ENST00000409333 C16orf95Q9H693 158 aa13.09□□□□□ -0.31
SSB-202ENST00000409333 C21orf62Q9NYP8 219 aa13.09□□□□□ -0.31
SSB-202ENST00000409333 AGPAT2O15120 278 aa13.08□□□□□ -0.32
SSB-202ENST00000409333 SPP1P10451 314 aa13.08□□□□□ -0.32
SSB-202ENST00000409333 THAP8Q8NA92 274 aa13.08□□□□□ -0.32
SSB-202ENST00000409333 LINC01006Q8NI28 216 aa13.08□□□□□ -0.32
SSB-202ENST00000409333 GGTLC1Q9BX51 225 aa13.08□□□□□ -0.32
SSB-202ENST00000409333 JMJD1CQ15652 2540 aa13.08□□□□□ -0.32
SSB-202ENST00000409333 MPDU1O75352 247 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 OR10J1P30954 320 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 CAMLGP49069 296 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 MFAP4P55083 255 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 ATP5G2Q06055 141 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 TEX38Q6PEX7 206 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 KLHDC1Q8N7A1 406 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 ZNF680Q8NEM1 530 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 ZNF502Q8TBZ5 544 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 GNPNAT1Q96EK6 184 aaPredicted RBP13.07□□□□□ -0.32
SSB-202ENST00000409333 CXorf58Q96LI9 332 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 CCDC140Q96MF4 163 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 PLA2G2EQ9NZK7 142 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 ZFP92A6NM28 416 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 CLN5O75503 358 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 NDUFA7O95182 113 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 RPLP1P05386 114 aaKnown RBP13.07□□□□□ -0.32
SSB-202ENST00000409333 ZNF90Q03938 601 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 Q56UQ5 140 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 FAM74A1Q5RGS3 127 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 EEF1AKMT3Q96AZ1 226 aa13.07□□□□□ -0.32
SSB-202ENST00000409333 TMEM89A2RUT3 159 aa13.06□□□□□ -0.32
SSB-202ENST00000409333 OR2T8A6NH00 312 aa13.06□□□□□ -0.32
SSB-202ENST00000409333 SEC11BP0C7V7 166 aa13.06□□□□□ -0.32
SSB-202ENST00000409333 IGLC1P0CG04 106 aa13.06□□□□□ -0.32
SSB-202ENST00000409333 GATA2P23769 480 aaPredicted RBP13.06□□□□□ -0.32
SSB-202ENST00000409333 FOXE3Q13461 319 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms