RNA–Protein interactions for RNA: ENST00000409088.3

LRRTM4-201, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 1 (best) BASIC

Gene LRRTM4, Length 3,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-201ENST00000409088 IGHV4-39P01824 125 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 CRYGBP07316 175 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 LINC00869P0C866 280 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 AREGP15514 252 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 GPX4P36969 197 aaPredicted RBP3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 RHOBP62745 196 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 PMS2P11Q13670 270 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 TMEM95Q3KNT9 176 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 SPNS3Q6ZMD2 512 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 FAM24BQ8N5W8 94 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 CACNG8Q8WXS5 425 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 NPIPB3Q92617 1050 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 SMIM7Q9BQ49 75 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 MANBALQ9NQG1 85 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 DOPEY1Q5JWR5 2465 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 ZNF462Q96JM2 2506 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 IGLC7A0M8Q6 106 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 C11orf94C9JXX5 98 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 INS-IGF2F8WCM5 200 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 FOXH1O75593 365 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 CRYBA1P05813 215 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 STAG3L2P0CL84 134 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 STAG3L3P0CL85 134 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 COMPP49747 757 aaPredicted RBP3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 LMO4P61968 165 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 SSBP2P81877 361 aaPredicted RBP3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 ODF1Q14990 250 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 C1orf122Q6ZSJ8 110 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 MIR17HGQ75NE6 70 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 RNASEH2CQ8TDP1 164 aaKnown RBP3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 MRPL36Q9P0J6 103 aaKnown RBP3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 MLXQ9UH92 298 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 FAM208BQ5VWN6 2430 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 EPG5Q9HCE0 2579 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 ODF3BA8MYP8 253 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 TOX4O94842 621 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 OR2C1O95371 312 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 CXorf1O96002 111 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 MOSP00540 346 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 ATP5G3P48201 142 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 PDLIM4P50479 330 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 RND2P52198 227 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 DYNAPQ8N1N2 210 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 C15orf54Q8N8G6 183 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 OR51G1Q8NGK1 321 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 SRSF12Q8WXF0 261 aaKnown RBP3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 CFHR4Q92496 578 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 CCL19Q99731 98 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 SLC25A33Q9BSK2 321 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 C7orf69Q9H7B7 122 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 URGCP-MRPS24S4R325 110 aa3.18□□□□□ -1.9
LRRTM4-201ENST00000409088 MAP1AP78559 2803 aaPredicted RBP3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 IGHV2-70DA0A0C4DH43 119 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 NCBP2LA6PVI3 153 aaKnown RBP3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 TMEM250H0YL14 139 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 NBR2O15453 112 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 MT-CO2P00403 227 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 MAS1LP35410 378 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 MFAP2P55001 183 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 PAX2Q02962 417 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 ZNF90Q03938 601 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 ADIRFQ15847 76 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 FBLN7Q53RD9 439 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 RUSC1-AS1Q66K80 236 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 CYP2G1PQ6ZSU1 146 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 OR5T1Q8NG75 326 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 NANPQ8TBE9 248 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 HIST1H2BAQ96A08 127 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 RNF5Q99942 180 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 FAM103A1Q9BTL3 118 aaKnown RBP3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 PARLQ9H300 379 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 SDF2L1Q9HCN8 221 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 DOK5Q9P104 306 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 CSMD1Q96PZ7 3565 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 TEX22C9J3V5 150 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 OR7C2O60412 319 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 NDUFB4O95168 129 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 NPPCP23582 126 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 GCHFRP30047 84 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 ATP5J2P56134 94 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 TMEM241Q24JQ0 296 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 TM4SF20Q53R12 229 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 CCDC144NLQ6NUI1 221 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 ZNF343Q6P1L6 599 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 ZFP82Q8N141 532 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 KIR3DL3Q8N743 410 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 TMEM37Q8WXS4 190 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 SIRPDQ9H106 197 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 TUBA4BQ9H853 241 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 NAT8Q9UHE5 227 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 FUT9Q9Y231 359 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 VPS13CQ709C8 3753 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 MT-ND4LP03901 98 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 SUMO1P63165 101 aaKnown RBP3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 PNRC1Q12796 327 aaPredicted RBP3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 FXYD3Q14802 87 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 TMEM249Q2WGJ8 235 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 ETFRF1Q6IPR1 90 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 OR2T10Q8NGZ9 312 aa3.17□□□□□ -1.9
LRRTM4-201ENST00000409088 OR1P1Q8NH06 330 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms