RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 PNKDQ8N490 385 aa10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 TMEM167AQ8TBQ9 72 aa10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 UHRF2Q96PU4 802 aa10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 BPESC1Q9GZL8 116 aa10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 AMMECR1Q9Y4X0 333 aaPredicted RBP10.42□□□□□ -0.74
SMARCB1-203ENST00000407082 TRBV24-1A0A075B6N3 115 aa10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 VWC2LB2RUY7 222 aa10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 H0YJW9 148 aa10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 COMPP49747 757 aaPredicted RBP10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 RPS16P62249 146 aaKnown RBP10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 SNRPEP62304 92 aaKnown RBP10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 ADIRFQ15847 76 aa10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 TMEM155Q4W5P6 130 aa10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 KCNIP4Q6PIL6 250 aa10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 TGIF2LXQ8IUE1 241 aa10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 RNASEH2CQ8TDP1 164 aaKnown RBP10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 C2CD4CQ8TF44 421 aa10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 MGST2Q99735 147 aa10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 PARLQ9H300 379 aa10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 TMEM167BQ9NRX6 74 aa10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 DOK5Q9P104 306 aa10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 SLC45A2Q9UMX9 530 aa10.41□□□□□ -0.74
SMARCB1-203ENST00000407082 H7BYZ3 331 aa10.4□□□□□ -0.74
SMARCB1-203ENST00000407082 MMP23AO75900 390 aa10.4□□□□□ -0.74
SMARCB1-203ENST00000407082 SAA1P0DJI8 122 aaPredicted RBP10.4□□□□□ -0.74
SMARCB1-203ENST00000407082 RPL35P42766 123 aaKnown RBP10.4□□□□□ -0.74
SMARCB1-203ENST00000407082 KIAA0141Q14154 515 aaPredicted RBP10.4□□□□□ -0.74
SMARCB1-203ENST00000407082 HLA-DRB5Q30154 266 aa10.4□□□□□ -0.74
SMARCB1-203ENST00000407082 CST9LP1Q5W188 147 aa10.4□□□□□ -0.74
SMARCB1-203ENST00000407082 ETFRF1Q6IPR1 90 aa10.4□□□□□ -0.74
SMARCB1-203ENST00000407082 C1orf229Q6ZS94 237 aaPredicted RBP10.4□□□□□ -0.74
SMARCB1-203ENST00000407082 RPUSD4Q96CM3 377 aaKnown RBP10.4□□□□□ -0.74
SMARCB1-203ENST00000407082 FAM210BQ96KR6 192 aa10.4□□□□□ -0.74
SMARCB1-203ENST00000407082 NABP2Q9BQ15 211 aa10.4□□□□□ -0.74
SMARCB1-203ENST00000407082 MRPL20Q9BYC9 149 aaKnown RBP10.4□□□□□ -0.74
SMARCB1-203ENST00000407082 TMEM133Q9H2Q1 129 aa10.4□□□□□ -0.74
SMARCB1-203ENST00000407082 MIOXQ9UGB7 285 aa10.4□□□□□ -0.74
SMARCB1-203ENST00000407082 TET2Q6N021 2002 aaPredicted RBP10.4□□□□□ -0.75
SMARCB1-203ENST00000407082 YIF1AO95070 293 aa10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 IGHV2-70P01814 119 aa10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 SMIM6P0DI80 62 aa10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 IGHV1-8P0DP01 117 aa10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 CCL3L1P16619 93 aa10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 RPL23P62829 140 aaKnown RBP10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 S100A12P80511 92 aa10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 MIC13Q5XKP0 118 aa10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 Q8N7P7 452 aa10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 STPG3Q8N7X2 389 aa10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 TEX45Q8NA69 505 aa10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 Q8WTZ3 238 aa10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 IMMP2LQ96T52 175 aa10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 RNF5Q99942 180 aa10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 MRPL32Q9BYC8 188 aaKnown RBP10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 TMPRSS5Q9H3S3 457 aa10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 NDUFA4L2Q9NRX3 87 aa10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 TECRQ9NZ01 308 aaKnown RBP10.39□□□□□ -0.75
SMARCB1-203ENST00000407082 ELOA3CA0A087WX78 387 aaPredicted RBP10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 IGHV4-61A0A0C4DH41 118 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 HMGB3O15347 200 aaKnown RBP10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 AREGP15514 252 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 MEOX2P50222 304 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 DLX6P56179 175 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 SELENOTP62341 195 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 RPL19P84098 196 aaKnown RBP10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 PRR20EP86478 221 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 PRR20CP86479 221 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 PRR20DP86480 221 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 PRR20BP86481 221 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 PRR20AP86496 221 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 DEFA6Q01524 100 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 CD69Q07108 199 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 ARSJQ5FYB0 599 aaPredicted RBP10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 LYPD2Q6UXB3 125 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 PQLC2Q6ZP29 291 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 MMD2Q8IY49 270 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 OR8B3Q8NGG8 313 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 ST6GALNAC6Q969X2 333 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 OR8B2Q96RD0 313 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 PATZ1Q9HBE1 687 aaKnown RBP10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 FUT9Q9Y231 359 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 LY96Q9Y6Y9 160 aa10.38□□□□□ -0.75
SMARCB1-203ENST00000407082 ZNF98A6NK75 572 aa10.37□□□□□ -0.75
SMARCB1-203ENST00000407082 CORTO00230 105 aa10.37□□□□□ -0.75
SMARCB1-203ENST00000407082 IGHV2-5P01817 119 aa10.37□□□□□ -0.75
SMARCB1-203ENST00000407082 IGKV1-16P04430 117 aa10.37□□□□□ -0.75
SMARCB1-203ENST00000407082 ARL14EPLP0DKL9 152 aa10.37□□□□□ -0.75
SMARCB1-203ENST00000407082 RNASE2P10153 161 aaKnown RBP10.37□□□□□ -0.75
SMARCB1-203ENST00000407082 GCHFRP30047 84 aa10.37□□□□□ -0.75
SMARCB1-203ENST00000407082 GALR1P47211 349 aa10.37□□□□□ -0.75
SMARCB1-203ENST00000407082 FABP9Q0Z7S8 132 aa10.37□□□□□ -0.75
SMARCB1-203ENST00000407082 BEND2Q8NDZ0 799 aa10.37□□□□□ -0.75
SMARCB1-203ENST00000407082 OR1L4Q8NGR5 311 aa10.37□□□□□ -0.75
SMARCB1-203ENST00000407082 GATAD1Q8WUU5 269 aa10.37□□□□□ -0.75
SMARCB1-203ENST00000407082 TMEM170AQ8WVE7 144 aa10.37□□□□□ -0.75
SMARCB1-203ENST00000407082 C22orf15Q8WYQ4 148 aa10.37□□□□□ -0.75
SMARCB1-203ENST00000407082 PFDN5Q99471 154 aa10.37□□□□□ -0.75
SMARCB1-203ENST00000407082 SRD5A3Q9H8P0 318 aa10.37□□□□□ -0.75
SMARCB1-203ENST00000407082 SVEP1Q4LDE5 3571 aa10.36□□□□□ -0.75
SMARCB1-203ENST00000407082 SRRM4A7MD48 611 aaKnown RBP10.36□□□□□ -0.75
SMARCB1-203ENST00000407082 ACTL6BO94805 426 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms