RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 NPPCP23582 126 aa19.67■□□□□ 0.74
DNMT3A-206ENST00000406659 DNAJC4Q9NNZ3 241 aa19.67■□□□□ 0.74
DNMT3A-206ENST00000406659 PRELID1Q9Y255 219 aa19.67■□□□□ 0.74
DNMT3A-206ENST00000406659 YTHDF2Q9Y5A9 579 aaKnown RBP19.67■□□□□ 0.74
DNMT3A-206ENST00000406659 TACC2O95359 2948 aa19.67■□□□□ 0.74
DNMT3A-206ENST00000406659 CACNA1BQ00975 2339 aa19.66■□□□□ 0.74
DNMT3A-206ENST00000406659 IGKV1D-37A0A075B6S9 117 aa19.66■□□□□ 0.74
DNMT3A-206ENST00000406659 C1orf196B1AJZ1 125 aa19.66■□□□□ 0.74
DNMT3A-206ENST00000406659 DYNAPQ8N1N2 210 aa19.66■□□□□ 0.74
DNMT3A-206ENST00000406659 OR51G1Q8NGK1 321 aa19.66■□□□□ 0.74
DNMT3A-206ENST00000406659 MRPL32Q9BYC8 188 aaKnown RBP19.66■□□□□ 0.74
DNMT3A-206ENST00000406659 TMEM167BQ9NRX6 74 aa19.66■□□□□ 0.74
DNMT3A-206ENST00000406659 COX7A2P2O60397 106 aa19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 PRB1P04280 392 aa19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 RPL23P62829 140 aaKnown RBP19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 ZNF90Q03938 601 aa19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 PQLC2Q6ZP29 291 aa19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 OR1L4Q8NGR5 311 aa19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 TMEM37Q8WXS4 190 aa19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 TMEM242Q9NWH2 141 aa19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 TBL2Q9Y4P3 447 aaKnown RBP19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 NDUFB4O95168 129 aa19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 C8orf88P0DMB2 117 aa19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 UBE2E1P51965 193 aa19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 C5orf64Q2M2E5 130 aa19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 TBX15Q96SF7 602 aa19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 PFDN5Q99471 154 aa19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 SPOCK3Q9BQ16 436 aa19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 CTDSP1Q9GZU7 261 aa19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 KLF2Q9Y5W3 355 aaPredicted RBP19.65■□□□□ 0.74
DNMT3A-206ENST00000406659 CLDN34H7C241 214 aa19.64■□□□□ 0.73
DNMT3A-206ENST00000406659 OR7C2O60412 319 aa19.64■□□□□ 0.73
DNMT3A-206ENST00000406659 TSPAN9O75954 239 aa19.64■□□□□ 0.73
DNMT3A-206ENST00000406659 RNF224P0DH78 156 aa19.64■□□□□ 0.73
DNMT3A-206ENST00000406659 RAB5BP61020 215 aa19.64■□□□□ 0.73
DNMT3A-206ENST00000406659 FXYD3Q14802 87 aa19.64■□□□□ 0.73
DNMT3A-206ENST00000406659 OR4X1Q8NH49 305 aa19.64■□□□□ 0.73
DNMT3A-206ENST00000406659 PIMREGQ9BSJ6 248 aa19.64■□□□□ 0.73
DNMT3A-206ENST00000406659 TNFRSF19Q9NS68 423 aa19.64■□□□□ 0.73
DNMT3A-206ENST00000406659 PSMB11A5LHX3 300 aa19.63■□□□□ 0.73
DNMT3A-206ENST00000406659 ZFP82Q8N141 532 aa19.63■□□□□ 0.73
DNMT3A-206ENST00000406659 TMEM116Q8NCL8 245 aa19.63■□□□□ 0.73
DNMT3A-206ENST00000406659 FAM168AQ92567 244 aa19.63■□□□□ 0.73
DNMT3A-206ENST00000406659 DOK5Q9P104 306 aa19.63■□□□□ 0.73
DNMT3A-206ENST00000406659 URGCP-MRPS24S4R325 110 aa19.63■□□□□ 0.73
DNMT3A-206ENST00000406659 IGHV3-21A0A0B4J1V1 117 aa19.62■□□□□ 0.73
DNMT3A-206ENST00000406659 BPIFB3P59826 476 aa19.62■□□□□ 0.73
DNMT3A-206ENST00000406659 ELOBQ15370 118 aa19.62■□□□□ 0.73
DNMT3A-206ENST00000406659 C10orf113Q5VZT2 155 aa19.62■□□□□ 0.73
DNMT3A-206ENST00000406659 ZNF343Q6P1L6 599 aa19.62■□□□□ 0.73
DNMT3A-206ENST00000406659 UHRF2Q96PU4 802 aa19.62■□□□□ 0.73
DNMT3A-206ENST00000406659 TRGV9Q99603 122 aa19.62■□□□□ 0.73
DNMT3A-206ENST00000406659 WNT10AQ9GZT5 417 aa19.62■□□□□ 0.73
DNMT3A-206ENST00000406659 ARL2-SNX15V9GYD0 113 aa19.62■□□□□ 0.73
DNMT3A-206ENST00000406659 AKAP6Q13023 2319 aa19.62■□□□□ 0.73
DNMT3A-206ENST00000406659 MALSU1Q96EH3 234 aa19.62■□□□□ 0.73
DNMT3A-206ENST00000406659 NCBP2LA6PVI3 153 aaKnown RBP19.61■□□□□ 0.73
DNMT3A-206ENST00000406659 EBI3Q14213 229 aa19.61■□□□□ 0.73
DNMT3A-206ENST00000406659 FBLN7Q53RD9 439 aa19.61■□□□□ 0.73
DNMT3A-206ENST00000406659 RUSC1-AS1Q66K80 236 aa19.61■□□□□ 0.73
DNMT3A-206ENST00000406659 Q8WTZ3 238 aa19.61■□□□□ 0.73
DNMT3A-206ENST00000406659 LPAR2Q9HBW0 351 aa19.61■□□□□ 0.73
DNMT3A-206ENST00000406659 DMRT1Q9Y5R6 373 aa19.61■□□□□ 0.73
DNMT3A-206ENST00000406659 SCO2A0A1W2PP80 73 aa19.6■□□□□ 0.73
DNMT3A-206ENST00000406659 ZNF503Q96F45 646 aa19.6■□□□□ 0.73
DNMT3A-206ENST00000406659 TMEM11P17152 192 aa19.6■□□□□ 0.73
DNMT3A-206ENST00000406659 CTRB1P17538 263 aa19.6■□□□□ 0.73
DNMT3A-206ENST00000406659 CTRB2Q6GPI1 263 aa19.6■□□□□ 0.73
DNMT3A-206ENST00000406659 Q8N6K4 173 aa19.6■□□□□ 0.73
DNMT3A-206ENST00000406659 BBC3Q96PG8 261 aaPredicted RBP19.6■□□□□ 0.73
DNMT3A-206ENST00000406659 DERL1Q9BUN8 251 aa19.6■□□□□ 0.73
DNMT3A-206ENST00000406659 POLR3KQ9Y2Y1 108 aaPredicted RBP19.6■□□□□ 0.73
DNMT3A-206ENST00000406659 WNK2Q9Y3S1 2297 aa19.59■□□□□ 0.73
DNMT3A-206ENST00000406659 USP24Q9UPU5 2620 aa19.59■□□□□ 0.73
DNMT3A-206ENST00000406659 PATE2Q6UY27 113 aa19.59■□□□□ 0.73
DNMT3A-206ENST00000406659 C16orf82Q7Z2V1 217 aa19.59■□□□□ 0.73
DNMT3A-206ENST00000406659 OR1L6Q8NGR2 347 aa19.59■□□□□ 0.73
DNMT3A-206ENST00000406659 C2CD4CQ8TF44 421 aa19.59■□□□□ 0.73
DNMT3A-206ENST00000406659 SLC25A2Q9BXI2 301 aa19.59■□□□□ 0.73
DNMT3A-206ENST00000406659 ELOA3CA0A087WX78 387 aaPredicted RBP19.58■□□□□ 0.73
DNMT3A-206ENST00000406659 TRAV5A0A0B4J249 113 aa19.58■□□□□ 0.73
DNMT3A-206ENST00000406659 ATP5J2P56134 94 aa19.58■□□□□ 0.73
DNMT3A-206ENST00000406659 CLEC2AQ6UVW9 174 aa19.58■□□□□ 0.73
DNMT3A-206ENST00000406659 C10orf105Q8TEF2 133 aa19.58■□□□□ 0.73
DNMT3A-206ENST00000406659 FAM167A-AS1Q96KT0 104 aa19.58■□□□□ 0.73
DNMT3A-206ENST00000406659 SPTAN1Q13813 2472 aaKnown RBP19.58■□□□□ 0.72
DNMT3A-206ENST00000406659 TGIF2-C20orf24A0A0A6YYL0 155 aa19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 I3L2K1 104 aa19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 NDUFS8O00217 210 aa19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 CXCL1P09341 107 aa19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 OR10J4P0C629 311 aa19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 FAM106CPP0CH98 169 aa19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 RPS10P46783 165 aaKnown RBP19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 MORN5Q5VZ52 161 aa19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 ZNF562Q6V9R5 426 aa19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 OR5T1Q8NG75 326 aa19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 OR5AU1Q8NGC0 362 aa19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 FAM103A1Q9BTL3 118 aaKnown RBP19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 BIN3Q9NQY0 253 aa19.57■□□□□ 0.72
DNMT3A-206ENST00000406659 ZNF355PQ9NSJ1 428 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms