RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 WISP2O76076 250 aa13.32□□□□□ -0.28
COL4A3BP-204ENST00000405807 CER1O95813 267 aa13.32□□□□□ -0.28
COL4A3BP-204ENST00000405807 OR1C1Q15619 314 aa13.32□□□□□ -0.28
COL4A3BP-204ENST00000405807 SPANXB1Q9NS25 103 aaPredicted RBP13.32□□□□□ -0.28
COL4A3BP-204ENST00000405807 hDV102S1A0JD36 115 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 NTN3O00634 580 aaPredicted RBP13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 FRMD6-AS1P0C7T7 363 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 TBR1Q16650 682 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 FAM53AQ6NSI3 398 aaPredicted RBP13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 EBLN2Q6P2I7 272 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 TREML4Q6UXN2 200 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 MDP1Q86V88 176 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 GCM1Q9NP62 436 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 TRBV9A0A0B4J1U6 114 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 LINC00473A8K010 186 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 APOA2P02652 100 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 GRPP07492 148 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 HIST1H1EP10412 219 aaKnown RBP13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 IGFBP4P22692 258 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 CRYBB3P26998 211 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 LGALS4P56470 323 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 UBE2G1P62253 170 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 ZXDAP98168 799 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 TBC1D28Q2M2D7 210 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 LY96Q9Y6Y9 160 aa13.31□□□□□ -0.28
COL4A3BP-204ENST00000405807 OR4C46A6NHA9 309 aa13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 HLA-DRB1P01911 266 aa13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 RPEL1Q2QD12 228 aa13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 ZNF718Q3SXZ3 478 aa13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 TMEM97Q5BJF2 176 aa13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 RAB37Q96AX2 223 aa13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 GRAMD2BQ96HH9 432 aa13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 CITED2Q99967 270 aaPredicted RBP13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 CYSLTR1Q9Y271 337 aa13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 IGHV3-64DA0A0J9YX35 117 aa13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 KBTBD11-OT1A0A1B0GTJ5 212 aa13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 A6NDN8 102 aa13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 FAM181BA6NEQ2 426 aa13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 PI4KAP42356 2102 aa13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 RPL31P62899 125 aaKnown RBP13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 MIC13Q5XKP0 118 aa13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 C6orf15Q6UXA7 325 aaPredicted RBP13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 MGST2Q99735 147 aa13.3□□□□□ -0.28
COL4A3BP-204ENST00000405807 USF3Q68DE3 2245 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 K7EN84 100 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 OR9G9P0C7N8 305 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 FABP2P12104 132 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 ZNF766Q5HY98 468 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 OR8B3Q8NGG8 313 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 C18orf32Q8TCD1 76 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 PTH2Q96A98 100 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 OR8B2Q96RD0 313 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 TPPP3Q9BW30 176 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 GGTLC1Q9BX51 225 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 HEYLQ9NQ87 328 aaPredicted RBP13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 YTHDF2Q9Y5A9 579 aaKnown RBP13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 MED12LQ86YW9 2145 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 FAM90A9PA6NNJ1 464 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 C9JCJ5 164 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 GCHFRP30047 84 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 ZNF439Q8NDP4 499 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 OR4A16Q8NH70 328 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 DDB2Q92466 427 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 GNB1LQ9BYB4 327 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 HES4Q9HCC6 221 aa13.29□□□□□ -0.28
COL4A3BP-204ENST00000405807 A0A087WX48 190 aa13.28□□□□□ -0.28
COL4A3BP-204ENST00000405807 RRHO14718 337 aa13.28□□□□□ -0.28
COL4A3BP-204ENST00000405807 LINC00205P59089 165 aa13.28□□□□□ -0.28
COL4A3BP-204ENST00000405807 MMD2Q8IY49 270 aa13.28□□□□□ -0.28
COL4A3BP-204ENST00000405807 ZNF835Q9Y2P0 537 aa13.28□□□□□ -0.28
COL4A3BP-204ENST00000405807 TRGV10A0A0A0MS01 117 aa13.28□□□□□ -0.28
COL4A3BP-204ENST00000405807 PLGLB1Q02325 96 aa13.28□□□□□ -0.28
COL4A3BP-204ENST00000405807 LINC00696Q6ZRV3 163 aa13.28□□□□□ -0.28
COL4A3BP-204ENST00000405807 NAT8BQ9UHF3 227 aa13.28□□□□□ -0.28
COL4A3BP-204ENST00000405807 CSDC2Q9Y534 153 aaKnown RBP13.28□□□□□ -0.28
COL4A3BP-204ENST00000405807 MT-ATP8P03928 68 aa13.27□□□□□ -0.28
COL4A3BP-204ENST00000405807 PRTN3P24158 256 aa13.27□□□□□ -0.28
COL4A3BP-204ENST00000405807 MAGEA5P43359 124 aa13.27□□□□□ -0.28
COL4A3BP-204ENST00000405807 PSG7Q13046 419 aa13.27□□□□□ -0.28
COL4A3BP-204ENST00000405807 KIR3DS1Q14943 382 aa13.27□□□□□ -0.28
COL4A3BP-204ENST00000405807 C11orf52Q96A22 123 aa13.27□□□□□ -0.28
COL4A3BP-204ENST00000405807 ZNF257Q9Y2Q1 563 aa13.27□□□□□ -0.28
COL4A3BP-204ENST00000405807 COQ2Q96H96 371 aa13.27□□□□□ -0.29
COL4A3BP-204ENST00000405807 SFXN3Q9BWM7 321 aa13.27□□□□□ -0.29
COL4A3BP-204ENST00000405807 FOXF2Q12947 444 aa13.26□□□□□ -0.29
COL4A3BP-204ENST00000405807 DHRS13Q6UX07 377 aa13.26□□□□□ -0.29
COL4A3BP-204ENST00000405807 SCRT2Q9NQ03 307 aa13.26□□□□□ -0.29
COL4A3BP-204ENST00000405807 LOXL2Q9Y4K0 774 aa13.26□□□□□ -0.29
COL4A3BP-204ENST00000405807 IGHV3-43A0A0B4J1X8 118 aa13.26□□□□□ -0.29
COL4A3BP-204ENST00000405807 MT-ND6P03923 174 aa13.26□□□□□ -0.29
COL4A3BP-204ENST00000405807 IGHV3-43DP0DP04 118 aa13.26□□□□□ -0.29
COL4A3BP-204ENST00000405807 SRIP30626 198 aa13.26□□□□□ -0.29
COL4A3BP-204ENST00000405807 WFDC2Q14508 124 aa13.26□□□□□ -0.29
COL4A3BP-204ENST00000405807 TTTY12Q9BZ98 90 aa13.26□□□□□ -0.29
COL4A3BP-204ENST00000405807 DEFB108AA8MXU0 73 aa13.26□□□□□ -0.29
COL4A3BP-204ENST00000405807 IQCF6A8MYZ5 107 aa13.26□□□□□ -0.29
COL4A3BP-204ENST00000405807 PRSS46E5RG02 174 aa13.26□□□□□ -0.29
COL4A3BP-204ENST00000405807 FCGR3BO75015 233 aa13.26□□□□□ -0.29
COL4A3BP-204ENST00000405807 CFIP05156 583 aa13.26□□□□□ -0.29
COL4A3BP-204ENST00000405807 VDAC2P45880 294 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms