RNA–Protein interactions for RNA: ENST00000404989.1

PARVB-203, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-203ENST00000404989 PFDN5Q99471 154 aa12.93□□□□□ -0.34
PARVB-203ENST00000404989 MRPL36Q9P0J6 103 aaKnown RBP12.93□□□□□ -0.34
PARVB-203ENST00000404989 ARL2-SNX15V9GYD0 113 aa12.93□□□□□ -0.34
PARVB-203ENST00000404989 A1L4Q6 167 aa12.92□□□□□ -0.34
PARVB-203ENST00000404989 ZNF727A8MUV8 499 aa12.92□□□□□ -0.34
PARVB-203ENST00000404989 OR5G3P0C626 314 aa12.92□□□□□ -0.34
PARVB-203ENST00000404989 GCHFRP30047 84 aa12.92□□□□□ -0.34
PARVB-203ENST00000404989 FXYD3Q14802 87 aa12.92□□□□□ -0.34
PARVB-203ENST00000404989 FAM78BQ5VT40 261 aa12.92□□□□□ -0.34
PARVB-203ENST00000404989 PQLC2Q6ZP29 291 aa12.92□□□□□ -0.34
PARVB-203ENST00000404989 TRGV9Q99603 122 aa12.92□□□□□ -0.34
PARVB-203ENST00000404989 C20orf24Q9BUV8 137 aa12.92□□□□□ -0.34
PARVB-203ENST00000404989 TMEM167BQ9NRX6 74 aa12.92□□□□□ -0.34
PARVB-203ENST00000404989 PRELID1Q9Y255 219 aa12.92□□□□□ -0.34
PARVB-203ENST00000404989 DMRT1Q9Y5R6 373 aa12.92□□□□□ -0.34
PARVB-203ENST00000404989 MED13LQ71F56 2210 aa12.91□□□□□ -0.34
PARVB-203ENST00000404989 FLNCQ14315 2725 aa12.91□□□□□ -0.34
PARVB-203ENST00000404989 C11orf94C9JXX5 98 aa12.91□□□□□ -0.34
PARVB-203ENST00000404989 APELAP0DMC3 54 aa12.91□□□□□ -0.34
PARVB-203ENST00000404989 TMEM11P17152 192 aa12.91□□□□□ -0.34
PARVB-203ENST00000404989 RND2P52198 227 aa12.91□□□□□ -0.34
PARVB-203ENST00000404989 BPIFB3P59826 476 aa12.91□□□□□ -0.34
PARVB-203ENST00000404989 RUSC1-AS1Q66K80 236 aa12.91□□□□□ -0.34
PARVB-203ENST00000404989 ZNF562Q6V9R5 426 aa12.91□□□□□ -0.34
PARVB-203ENST00000404989 TMEM116Q8NCL8 245 aa12.91□□□□□ -0.34
PARVB-203ENST00000404989 PERPQ96FX8 193 aa12.91□□□□□ -0.34
PARVB-203ENST00000404989 NAT8Q9UHE5 227 aa12.91□□□□□ -0.34
PARVB-203ENST00000404989 ABCA2Q9BZC7 2435 aa12.91□□□□□ -0.34
PARVB-203ENST00000404989 NAV3Q8IVL0 2385 aa12.91□□□□□ -0.34
PARVB-203ENST00000404989 ZFYVE26Q68DK2 2539 aa12.9□□□□□ -0.34
PARVB-203ENST00000404989 TACC2O95359 2948 aa12.9□□□□□ -0.34
PARVB-203ENST00000404989 IGKV1D-37A0A075B6S9 117 aa12.9□□□□□ -0.34
PARVB-203ENST00000404989 CENPVL3A0A0U1RRI6 287 aa12.9□□□□□ -0.34
PARVB-203ENST00000404989 NPFFO15130 113 aa12.9□□□□□ -0.34
PARVB-203ENST00000404989 GATA2P23769 480 aaPredicted RBP12.9□□□□□ -0.34
PARVB-203ENST00000404989 FAM120AOSQ5T036 256 aa12.9□□□□□ -0.34
PARVB-203ENST00000404989 SPATA31B1PQ5VZV4 182 aa12.9□□□□□ -0.34
PARVB-203ENST00000404989 SLC25A33Q9BSK2 321 aa12.9□□□□□ -0.34
PARVB-203ENST00000404989 SEPSECSQ9HD40 501 aaKnown RBP12.9□□□□□ -0.34
PARVB-203ENST00000404989 DNAJC4Q9NNZ3 241 aa12.9□□□□□ -0.34
PARVB-203ENST00000404989 WNK2Q9Y3S1 2297 aa12.9□□□□□ -0.34
PARVB-203ENST00000404989 ZNF462Q96JM2 2506 aa12.9□□□□□ -0.34
PARVB-203ENST00000404989 NCBP2LA6PVI3 153 aaKnown RBP12.9□□□□□ -0.35
PARVB-203ENST00000404989 IGHV3-48P01763 117 aa12.9□□□□□ -0.35
PARVB-203ENST00000404989 CTRB1P17538 263 aa12.9□□□□□ -0.35
PARVB-203ENST00000404989 CST9LP1Q5W188 147 aa12.9□□□□□ -0.35
PARVB-203ENST00000404989 CTRB2Q6GPI1 263 aa12.9□□□□□ -0.35
PARVB-203ENST00000404989 PIP4P2Q8N4L2 257 aa12.9□□□□□ -0.35
PARVB-203ENST00000404989 SMIM7Q9BQ49 75 aa12.9□□□□□ -0.35
PARVB-203ENST00000404989 WNT10AQ9GZT5 417 aa12.9□□□□□ -0.35
PARVB-203ENST00000404989 SDF2L1Q9HCN8 221 aa12.9□□□□□ -0.35
PARVB-203ENST00000404989 TNFRSF19Q9NS68 423 aa12.9□□□□□ -0.35
PARVB-203ENST00000404989 SPTAN1Q13813 2472 aaKnown RBP12.89□□□□□ -0.35
PARVB-203ENST00000404989 COL12A1Q99715 3063 aa12.89□□□□□ -0.35
PARVB-203ENST00000404989 ELOA3CA0A087WX78 387 aaPredicted RBP12.89□□□□□ -0.35
PARVB-203ENST00000404989 CXorf65A6NEN9 183 aa12.89□□□□□ -0.35
PARVB-203ENST00000404989 COX7A2P2O60397 106 aa12.89□□□□□ -0.35
PARVB-203ENST00000404989 C8orf88P0DMB2 117 aa12.89□□□□□ -0.35
PARVB-203ENST00000404989 SLC25A16P16260 332 aa12.89□□□□□ -0.35
PARVB-203ENST00000404989 ATF4P18848 351 aaPredicted RBP12.89□□□□□ -0.35
PARVB-203ENST00000404989 SAA4P35542 130 aa12.89□□□□□ -0.35
PARVB-203ENST00000404989 TMEM241Q24JQ0 296 aa12.89□□□□□ -0.35
PARVB-203ENST00000404989 MIR17HGQ75NE6 70 aa12.89□□□□□ -0.35
PARVB-203ENST00000404989 PSMB11A5LHX3 300 aa12.88□□□□□ -0.35
PARVB-203ENST00000404989 NPIPB5A8MRT5 1133 aa12.88□□□□□ -0.35
PARVB-203ENST00000404989 FABP1P07148 127 aa12.88□□□□□ -0.35
PARVB-203ENST00000404989 ARPC1AQ92747 370 aa12.88□□□□□ -0.35
PARVB-203ENST00000404989 UHRF2Q96PU4 802 aa12.88□□□□□ -0.35
PARVB-203ENST00000404989 EPG5Q9HCE0 2579 aa12.88□□□□□ -0.35
PARVB-203ENST00000404989 MT-ND4LP03901 98 aa12.87□□□□□ -0.35
PARVB-203ENST00000404989 AKR1C3P42330 323 aa12.87□□□□□ -0.35
PARVB-203ENST00000404989 UBE2G2P60604 165 aa12.87□□□□□ -0.35
PARVB-203ENST00000404989 C10orf113Q5VZT2 155 aa12.87□□□□□ -0.35
PARVB-203ENST00000404989 OR4X1Q8NH49 305 aa12.87□□□□□ -0.35
PARVB-203ENST00000404989 CTDSP1Q9GZU7 261 aa12.87□□□□□ -0.35
PARVB-203ENST00000404989 PARLQ9H300 379 aa12.87□□□□□ -0.35
PARVB-203ENST00000404989 TMEM242Q9NWH2 141 aa12.87□□□□□ -0.35
PARVB-203ENST00000404989 UBR5O95071 2799 aaPredicted RBP12.87□□□□□ -0.35
PARVB-203ENST00000404989 COLCA2A8K830 154 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 I3L2K1 104 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 OR2C1O95371 312 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 COL8A1P27658 744 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 CX3CL1P78423 397 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 ZNF674Q2M3X9 581 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 RPUSD4Q96CM3 377 aaKnown RBP12.86□□□□□ -0.35
PARVB-203ENST00000404989 RASL11BQ9BPW5 248 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 IGHV1-69DA0A0B4J2H0 117 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 IGHV1-69P01742 117 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 HLA-DRB1P01911 266 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 GATA3P23771 443 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 ZNF90Q03938 601 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 RNF212Q495C1 297 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 ASPHD1Q5U4P2 390 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 TTC9CQ8N5M4 171 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 Q8N9W7 124 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 STXBP6Q8NFX7 210 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 TMEM37Q8WXS4 190 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 FAM103A1Q9BTL3 118 aaKnown RBP12.86□□□□□ -0.35
PARVB-203ENST00000404989 THYN1Q9P016 225 aa12.86□□□□□ -0.35
PARVB-203ENST00000404989 IGHV3-21A0A0B4J1V1 117 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms