RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 MIXL1Q9H2W2 232 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 RNF122Q9H9V4 155 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 NDUFB11Q9NX14 153 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 SLC35A3Q9Y2D2 325 aa1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 AMMECR1Q9Y4X0 333 aaPredicted RBP1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 DICER1Q9UPY3 1922 aaKnown RBP1.59□□□□□ -2.15
HMGB1P17-201ENST00000403495 FMN1Q68DA7 1419 aa1.58□□□□□ -2.16
HMGB1P17-201ENST00000403495 A0A1B0GVG6 124 aa1.58□□□□□ -2.16
HMGB1P17-201ENST00000403495 H3BRN7 92 aa1.58□□□□□ -2.16
HMGB1P17-201ENST00000403495 CYB5BO43169 146 aa1.58□□□□□ -2.16
HMGB1P17-201ENST00000403495 CST8O60676 142 aa1.58□□□□□ -2.16
HMGB1P17-201ENST00000403495 RPSAP08865 295 aaKnown RBP1.58□□□□□ -2.16
HMGB1P17-201ENST00000403495 SRIP30626 198 aa1.58□□□□□ -2.16
HMGB1P17-201ENST00000403495 YPEL3P61236 119 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P17-201ENST00000403495 SUPT4H1P63272 117 aaKnown RBP1.58□□□□□ -2.16
HMGB1P17-201ENST00000403495 ERHP84090 104 aaKnown RBP1.58□□□□□ -2.16
HMGB1P17-201ENST00000403495 LINC01554Q52M75 96 aa1.58□□□□□ -2.16
HMGB1P17-201ENST00000403495 HIST3H2BBQ8N257 126 aa1.58□□□□□ -2.16
HMGB1P17-201ENST00000403495 OR52R1Q8NGF1 315 aa1.58□□□□□ -2.16
HMGB1P17-201ENST00000403495 LYSMD1Q96S90 227 aa1.58□□□□□ -2.16
HMGB1P17-201ENST00000403495 CHST6Q9GZX3 395 aa1.58□□□□□ -2.16
HMGB1P17-201ENST00000403495 ATG2BQ96BY7 2078 aa1.58□□□□□ -2.16
HMGB1P17-201ENST00000403495 YTHDC2Q9H6S0 1430 aaKnown RBP1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 TOPBP1Q92547 1522 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 VWDEQ8N2E2 1590 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 IGHV3-64A0A075B6Q5 118 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 IGHV1-18A0A0C4DH31 117 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 ZNF860A6NHJ4 632 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 RIIAD1A6NNX1 92 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 H3BQV1 296 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 APOA2P02652 100 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 GLRXP35754 106 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 KRTAP12-4P60329 112 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 TMEM258P61165 79 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 TPRXLQ17RH7 258 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 SCGB2B2Q4G0G5 96 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 FAM27BQ5VT28 67 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 KTN1-AS1Q86SY8 53 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 EXOC3-AS1Q8N2X6 119 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 FAM24BQ8N5W8 94 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 TEX47Q8TBZ9 253 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 TMEM106AQ96A25 262 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 SERPINI1Q99574 410 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 Q9BRP9 147 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 DDA1Q9BW61 102 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 OSTCQ9NRP0 149 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 BAHCC1Q9P281 2608 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 ADAMTS7Q9UKP4 1686 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 TONSLQ96HA7 1378 aa1.57□□□□□ -2.16
HMGB1P17-201ENST00000403495 PXDNLA1KZ92 1463 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 CACNA1GO43497 2377 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 ARHGAP32A7KAX9 2087 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 A0A087X0T9 212 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 TRBV10-2A0A0K0K1G8 114 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 MAP1LC3B2A6NCE7 125 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 J3QQQ9 107 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 IGKV1-16P04430 117 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 SRP14P37108 136 aaKnown RBP1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 FXYD2P54710 66 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 RPL26P61254 145 aaKnown RBP1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 RRN3P1Q2M238 152 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 KHDC3LQ587J8 217 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 PCOTHQ58A44 107 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 DCUN1D2Q6PH85 259 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 C10orf126Q8N4M7 172 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 SIGLECL1Q8N7X8 197 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 OR8D4Q8NGM9 314 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 OR10K1Q8NGX5 313 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 PFN4Q8NHR9 129 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 DYDC1Q8WWB3 177 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 C11orf40Q8WZ69 217 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 MALSU1Q96EH3 234 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 DOHHQ9BU89 302 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 MAP1LC3BQ9GZQ8 125 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 PBOV1Q9GZY1 135 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 CXCL16Q9H2A7 254 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 TMEM106BQ9NUM4 274 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 CKLFQ9UBR5 152 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 RPL26L1Q9UNX3 145 aaKnown RBP1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 KDM5BQ9UGL1 1544 aa1.56□□□□□ -2.16
HMGB1P17-201ENST00000403495 ICE1Q9Y2F5 2266 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 TMSB15BA0A087X1C1 80 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 A0A0D9SEW6 157 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 DUXBA0A1W2PPF3 345 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 HMSDA8MTL9 139 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 LY6LH3BQJ8 138 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 PFDN1O60925 122 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 TCL1BO95988 128 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 CSN2P05814 226 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 EIF5AP63241 154 aaKnown RBP1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 NDUFA5Q16718 116 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 ZNF791Q3KP31 576 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 TMEM78Q5T7P6 136 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 BCL2L15Q5TBC7 163 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 DPPA3Q6W0C5 159 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 LRRC28Q86X40 367 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 TMEM86AQ8N2M4 240 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 GRPEL2Q8TAA5 225 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 WFDC5Q8TCV5 224 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 PYDC1Q8WXC3 89 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms