RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	LINC00469	Q8N7U9	141 aa		4.92	□□□□□ -1.62
CEACAM1-208	ENST00000403461	VN1R17P	Q8TDU5	208 aa		4.92	□□□□□ -1.62
CEACAM1-208	ENST00000403461	BSCL2	Q96G97	398 aa	Predicted RBP	4.92	□□□□□ -1.62
CEACAM1-208	ENST00000403461	CCDC90B	Q9GZT6	254 aa		4.92	□□□□□ -1.62
CEACAM1-208	ENST00000403461	HRH4	Q9H3N8	390 aa		4.92	□□□□□ -1.62
CEACAM1-208	ENST00000403461	BET1L	Q9NYM9	111 aa		4.92	□□□□□ -1.62
CEACAM1-208	ENST00000403461	TAS2R8	Q9NYW2	309 aa		4.92	□□□□□ -1.62
CEACAM1-208	ENST00000403461	KLK9	Q9UKQ9	250 aa		4.92	□□□□□ -1.62
CEACAM1-208	ENST00000403461	SPATA2	Q9UM82	520 aa		4.92	□□□□□ -1.62
CEACAM1-208	ENST00000403461	STRAP	Q9Y3F4	350 aa	Known RBP	4.92	□□□□□ -1.62
CEACAM1-208	ENST00000403461	KIAA1109	Q2LD37	5005 aa		4.92	□□□□□ -1.62
CEACAM1-208	ENST00000403461	OR2T8	A6NH00	312 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	C15orf62	A8K5M9	175 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461		E7EUB6	86 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461		K7EMT4	169 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	HLA-DQB1	P01920	261 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	CD5	P06127	495 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	EIF4E	P06730	217 aa	Known RBP	4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	HSMCR30	P0CW71	290 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	NQO2	P16083	231 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	NFYA	P23511	347 aa	Predicted RBP	4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	TAGLN2	P37802	199 aa	Known RBP	4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	TFPI2	P48307	235 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	OR2B8P	P59922	312 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	ARPC4	P59998	168 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	CATR1	Q13166	79 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	RCN1	Q15293	331 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	TIMM50	Q3ZCQ8	353 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	KCTD21	Q4G0X4	260 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461		Q56UQ5	140 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	TMEM41B	Q5BJD5	291 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	SOHLH1	Q5JUK2	328 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	HES5	Q5TA89	166 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	APRG1	Q8IVJ8	170 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	GDPD1	Q8N9F7	314 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	UBAC2	Q8NBM4	344 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	THAP6	Q8TBB0	222 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	DCSTAMP	Q9H295	470 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	VCX	Q9H320	206 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	SCN3B	Q9NY72	215 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	C21orf62	Q9NYP8	219 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	APLN	Q9ULZ1	77 aa		4.91	□□□□□ -1.62
CEACAM1-208	ENST00000403461	TRAV10	A0A0B4J240	114 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461		A0A1B0GUV1	79 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	DNASE2	O00115	360 aa	Predicted RBP	4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	DEFB4A	O15263	64 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	NUPL2	O15504	423 aa	Known RBP	4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	SCGN	O76038	276 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	YIF1A	O95070	293 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	S1PR2	O95136	353 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	S100A9	P06702	114 aa	Known RBP	4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461		P0DMU3	169 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	FAM231A	P0DMU4	169 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	FAM231C	P0DMU5	169 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	OR13C7	P0DN81	318 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	MYL9	P24844	172 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	CAMP	P49913	170 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TAS2R31	P59538	309 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	ERVK-16	P61578	105 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	RPL30	P62888	115 aa	Known RBP	4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	PLA2G7	Q13093	441 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	CNIH2	Q6PI25	160 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	SPAG16	Q8N0X2	631 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	DMBX1	Q8NFW5	382 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	GFI1	Q99684	422 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	BCL7B	Q9BQE9	202 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	ATG5	Q9H1Y0	275 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	ACOT13	Q9NPJ3	140 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	FKBP14	Q9NWM8	211 aa		4.9	□□□□□ -1.63
CEACAM1-208	ENST00000403461	IGKV3-7	A0A075B6H7	116 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	IGHV4-4	A0A075B6R2	117 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	IGHV7-4-1	A0A0J9YVY3	117 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461		A0A1B0GW64	132 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	IGLC7	A0M8Q6	106 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	IFITM5	A6NNB3	132 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	C15orf61	A6NNL5	157 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	FAM90A26	D6RGX4	464 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	ANKRD65	E5RJM6	399 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	UPK2	O00526	184 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TNFSF12	O43508	249 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	ZNF207	O43670	478 aa	Known RBP	4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	DFFB	O76075	338 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	HPRT1	P00492	218 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TRAPPC2	P0DI81	140 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	TRAPPC2B	P0DI82	140 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	MIF	P14174	115 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	ANXA7	P20073	488 aa	Known RBP	4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	HLA-DMB	P28068	263 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	GNG2	P59768	71 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	RPS25	P62851	125 aa	Known RBP	4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	MSMO1	Q15800	293 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	HACD4	Q5VWC8	232 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	PVRIG	Q6DKI7	326 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	STH	Q8IWL8	128 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	SLC7A5P1	Q8MH63	180 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	SECTM1	Q8WVN6	248 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	BORCS5	Q969J3	196 aa		4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	LSM10	Q969L4	123 aa	Known RBP	4.89	□□□□□ -1.63
CEACAM1-208	ENST00000403461	RNF2	Q99496	336 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms