RNA–Protein interactions for RNA: ENST00000402845.7

CACNA1C-221, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-221ENST00000402845 Q9H3A6 140 aa9.28□□□□□ -0.92
CACNA1C-221ENST00000402845 MSRB2Q9Y3D2 182 aa9.28□□□□□ -0.92
CACNA1C-221ENST00000402845 IFI27P40305 119 aaPredicted RBP9.27□□□□□ -0.92
CACNA1C-221ENST00000402845 HAPLN4Q86UW8 402 aa9.27□□□□□ -0.92
CACNA1C-221ENST00000402845 RBMY1FQ15415 496 aaKnown RBP9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 PRR31Q5SQ13 230 aa9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 Q6AWC8 147 aa9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 FAM216BQ8N7L0 139 aa9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 C17orf100A8MU93 164 aa9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 GLRX5Q86SX6 157 aa9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 OR52E5Q8NH55 327 aa9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 TDRD6O60522 2096 aaKnown RBP9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 CBLN1P23435 193 aa9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 ZCCHC24Q8N2G6 241 aaKnown RBP9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 C14orf144Q96I85 54 aa9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 JPT2Q9H910 190 aa9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 ARID2Q68CP9 1835 aa9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 ZNFX1Q9P2E3 1918 aaKnown RBP9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 A0A1B0GUT8 65 aa9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 TFF3Q07654 80 aa9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 VMO1Q7Z5L0 202 aa9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 PUSL1Q8N0Z8 303 aaKnown RBP9.27□□□□□ -0.93
CACNA1C-221ENST00000402845 OCIAD2Q56VL3 154 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 UBE2E2Q96LR5 201 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 OTORQ9NRC9 128 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 MIA3Q5JRA6 1907 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 TRAV14DV4A0A0A6YYC5 116 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 IGHV2OR16-5A0A0B4J2B6 119 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 RFPL3SP0C7P2 107 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 CIARTQ8N365 385 aaPredicted RBP9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 SCO2A0A1W2PP80 73 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 TMEM50AO95807 157 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 PSMG4Q5JS54 123 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 MYO16Q9Y6X6 1858 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 PTPRFP10586 1907 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 TRGV11A0A075B6L2 103 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 GGTLC3B5MD39 225 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 SLC17A3O00476 420 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 FOXA3P55318 350 aaPredicted RBP9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 NAPSAO96009 420 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 SSBP4Q9BWG4 385 aaPredicted RBP9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 GGTLC1Q9BX51 225 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 CLDN16Q9Y5I7 305 aa9.26□□□□□ -0.93
CACNA1C-221ENST00000402845 IZUMO1RA6ND01 250 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 MESP2Q0VG99 397 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 RNF182Q8N6D2 247 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 APCDD1LQ8NCL9 501 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 WDYHV1Q96HA8 205 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 ZNF646O15015 1829 aaPredicted RBP9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 TRAV25A0A0B4J276 109 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 F5H768 121 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 TNFRSF6BO95407 300 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 ESDP10768 282 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 IGHV1-2P23083 117 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 ORMDL3Q8N138 153 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 TRAV9-2A0A087WT02 112 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 CD59P13987 128 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 CTAG1AP78358 180 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 EGR4Q05215 589 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 FAM90A1Q86YD7 464 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 SLC50A1Q9BRV3 221 aa9.25□□□□□ -0.93
CACNA1C-221ENST00000402845 APC2O95996 2303 aa9.24□□□□□ -0.93
CACNA1C-221ENST00000402845 SLC25A38Q96DW6 304 aa9.24□□□□□ -0.93
CACNA1C-221ENST00000402845 H3BUX3 64 aa9.24□□□□□ -0.93
CACNA1C-221ENST00000402845 NBR2O15453 112 aa9.24□□□□□ -0.93
CACNA1C-221ENST00000402845 LINC00312Q9Y6C7 94 aa9.24□□□□□ -0.93
CACNA1C-221ENST00000402845 CD5LO43866 347 aa9.24□□□□□ -0.93
CACNA1C-221ENST00000402845 CD28P10747 220 aa9.24□□□□□ -0.93
CACNA1C-221ENST00000402845 ASCL2Q99929 193 aa9.24□□□□□ -0.93
CACNA1C-221ENST00000402845 TRAV12-1A0A0B4J245 112 aa9.24□□□□□ -0.93
CACNA1C-221ENST00000402845 SMCHD1A6NHR9 2005 aa9.24□□□□□ -0.93
CACNA1C-221ENST00000402845 DEFB130BP0DP73 79 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 DEFB130AP0DP74 79 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 EVI2AP22794 236 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 SRSF1Q07955 248 aaKnown RBP eCLIP9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 ZNF257Q9Y2Q1 563 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 NINQ8N4C6 2090 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 IGKV1D-42A0A075B6H8 117 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 TRGV1A0A0A0MS02 117 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 TMEM14DPA8MWL7 114 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 C12orf77C9JDV5 145 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 MIR17HGQ75NE6 70 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 MCRIP2Q9BUT9 160 aaKnown RBP9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 TMEM126AQ9H061 195 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 NRN1Q9NPD7 142 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 SCN1AP35498 2009 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 A0A0G2JMM0 328 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 A0A1W2PPB8 328 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 A0A1W2PRS3 328 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 KIR3DP1A8MWS1 328 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 RHOGP84095 191 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 PGPEP1LA6NFU8 196 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 MSGN1A6NI15 193 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 C1QCP02747 245 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 DAD1P61803 113 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 ACTL10Q5JWF8 245 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 PIP4P2Q8N4L2 257 aa9.23□□□□□ -0.93
CACNA1C-221ENST00000402845 C17orf98A8MV24 154 aa9.22□□□□□ -0.93
CACNA1C-221ENST00000402845 FHITP49789 147 aa9.22□□□□□ -0.93
CACNA1C-221ENST00000402845 KLRD1Q13241 179 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms