RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 Q0VG73 95 aa8.18□□□□□ -1.1
HERC3-202ENST00000402738 ACP7Q6ZNF0 438 aa8.18□□□□□ -1.1
HERC3-202ENST00000402738 C1orf122Q6ZSJ8 110 aa8.18□□□□□ -1.1
HERC3-202ENST00000402738 CACNG8Q8WXS5 425 aa8.18□□□□□ -1.1
HERC3-202ENST00000402738 RAB1BQ9H0U4 201 aa8.18□□□□□ -1.1
HERC3-202ENST00000402738 DOCK11Q5JSL3 2073 aa8.18□□□□□ -1.1
HERC3-202ENST00000402738 RAB9AP51151 201 aa8.18□□□□□ -1.1
HERC3-202ENST00000402738 TMEM249Q2WGJ8 235 aa8.18□□□□□ -1.1
HERC3-202ENST00000402738 NUP35Q8NFH5 326 aa8.18□□□□□ -1.1
HERC3-202ENST00000402738 COPS9Q8WXC6 57 aa8.18□□□□□ -1.1
HERC3-202ENST00000402738 REPIN1Q9BWE0 567 aaKnown RBP8.18□□□□□ -1.1
HERC3-202ENST00000402738 BRWD3Q6RI45 1802 aa8.18□□□□□ -1.1
HERC3-202ENST00000402738 TDRD15B5MCY1 1934 aaKnown RBP8.17□□□□□ -1.1
HERC3-202ENST00000402738 K7EP13 123 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 CDKN1BP46527 198 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 CLEC2AQ6UVW9 174 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 OR9G1Q8NH87 305 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 TIMP4Q99727 224 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 IGKV1-5P01602 117 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 C1QTNF5Q9BXJ0 243 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 RSPO3Q9BXY4 272 aaPredicted RBP8.17□□□□□ -1.1
HERC3-202ENST00000402738 OTORQ9NRC9 128 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 FAM90A27PA6NNH2 459 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 SS18L1O75177 396 aaPredicted RBP8.17□□□□□ -1.1
HERC3-202ENST00000402738 QRFPP83859 136 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 FAM214BQ7L5A3 538 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 OR13C6PQ8NH95 151 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 SLC25A2Q9BXI2 301 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 TRAV2A0A0B4J234 112 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 PAPPA-AS1Q5QFB9 102 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 TMEM14EPQ6UXP3 125 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 SHISA5Q8N114 240 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 DNASE2BQ8WZ79 361 aa8.17□□□□□ -1.1
HERC3-202ENST00000402738 PSME4Q14997 1843 aa8.16□□□□□ -1.1
HERC3-202ENST00000402738 PTPRZ1P23471 2315 aaPredicted RBP8.16□□□□□ -1.1
HERC3-202ENST00000402738 C15orf61A6NNL5 157 aa8.16□□□□□ -1.1
HERC3-202ENST00000402738 CD3EP07766 207 aa8.16□□□□□ -1.1
HERC3-202ENST00000402738 LHFPL4Q7Z7J7 247 aa8.16□□□□□ -1.1
HERC3-202ENST00000402738 OSR1Q8TAX0 266 aaPredicted RBP8.16□□□□□ -1.1
HERC3-202ENST00000402738 NXT2Q9NPJ8 142 aaKnown RBP8.16□□□□□ -1.1
HERC3-202ENST00000402738 NCR2O95944 276 aa8.16□□□□□ -1.1
HERC3-202ENST00000402738 RASL11AQ6T310 242 aa8.16□□□□□ -1.1
HERC3-202ENST00000402738 DLX4Q92988 240 aaPredicted RBP8.16□□□□□ -1.1
HERC3-202ENST00000402738 SCARF2Q96GP6 870 aaPredicted RBP8.16□□□□□ -1.1
HERC3-202ENST00000402738 FOXA2Q9Y261 457 aaPredicted RBP8.16□□□□□ -1.1
HERC3-202ENST00000402738 ARID2Q68CP9 1835 aa8.16□□□□□ -1.1
HERC3-202ENST00000402738 SHANK3Q9BYB0 1731 aa8.16□□□□□ -1.1
HERC3-202ENST00000402738 D6R8Y8 96 aa8.16□□□□□ -1.1
HERC3-202ENST00000402738 PPIFP30405 207 aaKnown RBP8.16□□□□□ -1.1
HERC3-202ENST00000402738 SUMO2P61956 95 aaKnown RBP8.16□□□□□ -1.1
HERC3-202ENST00000402738 PMS2CLQ68D20 193 aa8.16□□□□□ -1.1
HERC3-202ENST00000402738 CCDC144NLQ6NUI1 221 aa8.16□□□□□ -1.1
HERC3-202ENST00000402738 ATP6V0BQ99437 205 aa8.16□□□□□ -1.1
HERC3-202ENST00000402738 PILRBQ9UKJ0 227 aa8.16□□□□□ -1.1
HERC3-202ENST00000402738 NYNRINQ9P2P1 1898 aaKnown RBP8.16□□□□□ -1.1
HERC3-202ENST00000402738 TDRD6O60522 2096 aaKnown RBP8.16□□□□□ -1.1
HERC3-202ENST00000402738 DOCK4Q8N1I0 1966 aa8.15□□□□□ -1.1
HERC3-202ENST00000402738 IGHV3OR16-8A0A075B7F1 116 aa8.15□□□□□ -1.1
HERC3-202ENST00000402738 IGHV3-49A0A0A0MS15 119 aa8.15□□□□□ -1.1
HERC3-202ENST00000402738 IGHV3-66A0A0C4DH42 116 aa8.15□□□□□ -1.1
HERC3-202ENST00000402738 PSMB11A5LHX3 300 aa8.15□□□□□ -1.1
HERC3-202ENST00000402738 IGHV3-23P01764 117 aa8.15□□□□□ -1.1
HERC3-202ENST00000402738 MGST2Q99735 147 aa8.15□□□□□ -1.1
HERC3-202ENST00000402738 CHTOPQ9Y3Y2 248 aaKnown RBP8.15□□□□□ -1.1
HERC3-202ENST00000402738 IFNL4K9M1U5 179 aa8.15□□□□□ -1.1
HERC3-202ENST00000402738 LINC00271P0C7V0 271 aa8.15□□□□□ -1.1
HERC3-202ENST00000402738 LCNL1Q6ZST4 164 aa8.15□□□□□ -1.1
HERC3-202ENST00000402738 ZNF581Q9P0T4 197 aa8.15□□□□□ -1.1
HERC3-202ENST00000402738 A0A0G2JRQ6 117 aa8.15□□□□□ -1.1
HERC3-202ENST00000402738 NPIPB11E5RHQ5 1161 aa8.15□□□□□ -1.1
HERC3-202ENST00000402738 SMAD7O15105 426 aaKnown RBP8.15□□□□□ -1.1
HERC3-202ENST00000402738 TFF1P04155 84 aa8.15□□□□□ -1.1
HERC3-202ENST00000402738 SSBP2P81877 361 aaPredicted RBP8.15□□□□□ -1.1
HERC3-202ENST00000402738 CD300EQ496F6 205 aaPredicted RBP8.15□□□□□ -1.1
HERC3-202ENST00000402738 WBP1Q96G27 269 aa8.15□□□□□ -1.1
HERC3-202ENST00000402738 ZNF831Q5JPB2 1677 aa8.15□□□□□ -1.1
HERC3-202ENST00000402738 IGKV1-27A0A075B6S5 117 aa8.15□□□□□ -1.11
HERC3-202ENST00000402738 TMEM238C9JI98 176 aa8.15□□□□□ -1.11
HERC3-202ENST00000402738 ZNF497Q6ZNH5 498 aa8.15□□□□□ -1.11
HERC3-202ENST00000402738 PSG8Q9UQ74 426 aa8.15□□□□□ -1.11
HERC3-202ENST00000402738 SDK2Q58EX2 2172 aa8.15□□□□□ -1.11
HERC3-202ENST00000402738 CCL25O15444 150 aa8.14□□□□□ -1.11
HERC3-202ENST00000402738 SAA1P0DJI8 122 aaPredicted RBP8.14□□□□□ -1.11
HERC3-202ENST00000402738 IGLL1P15814 213 aa8.14□□□□□ -1.11
HERC3-202ENST00000402738 FAM201AQ5SY85 155 aa8.14□□□□□ -1.11
HERC3-202ENST00000402738 EBLN2Q6P2I7 272 aa8.14□□□□□ -1.11
HERC3-202ENST00000402738 RNASE8Q8TDE3 154 aaKnown RBP8.14□□□□□ -1.11
HERC3-202ENST00000402738 LY96Q9Y6Y9 160 aa8.14□□□□□ -1.11
HERC3-202ENST00000402738 UPK2O00526 184 aa8.14□□□□□ -1.11
HERC3-202ENST00000402738 AZU1P20160 251 aa8.14□□□□□ -1.11
HERC3-202ENST00000402738 ETDBQ3ZM63 59 aa8.14□□□□□ -1.11
HERC3-202ENST00000402738 TNFRSF14Q92956 283 aa8.14□□□□□ -1.11
HERC3-202ENST00000402738 PLSCR4Q9NRQ2 329 aa8.14□□□□□ -1.11
HERC3-202ENST00000402738 PGPEP1Q9NXJ5 209 aa8.14□□□□□ -1.11
HERC3-202ENST00000402738 C5orf63A6NC05 138 aa8.14□□□□□ -1.11
HERC3-202ENST00000402738 C9orf118A6NHY6 69 aa8.14□□□□□ -1.11
HERC3-202ENST00000402738 E9PQ18 207 aa8.14□□□□□ -1.11
HERC3-202ENST00000402738 SRSF1Q07955 248 aaKnown RBP eCLIP8.14□□□□□ -1.11
HERC3-202ENST00000402738 KLF17Q5JT82 389 aaPredicted RBP8.14□□□□□ -1.11
HERC3-202ENST00000402738 RPRMLQ8N4K4 120 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms