RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 BSCL2Q96G97 398 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 PRRT1Q99946 306 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 FAM110AQ9BQ89 295 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 RBM38Q9H0Z9 239 aaKnown RBP4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 ZMAT4Q9H898 229 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 SRD5A3Q9H8P0 318 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 PALMDQ9NP74 551 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 MCUBQ9NWR8 336 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 SLC2A8Q9NY64 477 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 MRPL36Q9P0J6 103 aaKnown RBP4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 RABL2AQ9UBK7 228 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 CACNG5Q9UF02 275 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 RABL2BQ9UNT1 228 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 GPR132Q9UNW8 380 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 UFC1Q9Y3C8 167 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 V9GYH0 126 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 DYNC2H1Q8NCM8 4307 aaKnown RBP4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 NDUFA4O00483 81 aa4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 NUPL2O15504 423 aaKnown RBP4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 GNG7O60262 68 aa4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 ATG12O94817 140 aa4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 YIF1AO95070 293 aa4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 CDS2O95674 445 aa4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 AKR1C4P17516 323 aa4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 SNCAP37840 140 aa4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 ELLP55199 621 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 KLF9Q13886 244 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 TMEM187Q14656 261 aa4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 ZNF79Q15937 498 aa4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 SPSB3Q6PJ21 355 aa4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 LINC00322Q6ZN03 302 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 RBPMS2Q6ZRY4 209 aaKnown RBP4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 RBPMSQ93062 196 aaKnown RBP4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 MARC2Q969Z3 335 aa4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 SPATA25Q9BR10 227 aa4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 PDCD10Q9BUL8 212 aa4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 FNDC4Q9H6D8 234 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 ENY2Q9NPA8 101 aa4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 DAZ1Q9NQZ3 744 aaKnown RBP4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 MRPL27Q9P0M9 148 aaKnown RBP4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 UBQLN2Q9UHD9 624 aa4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 SCP2D1Q9UJQ7 156 aa4.31□□□□□ -1.72
HMGB1P20-201ENST00000402555 CSMD3Q7Z407 3707 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 STARD9Q9P2P6 4700 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 IGKV3-7A0A075B6H7 116 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 TRAV25A0A0B4J276 109 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 IGHV3-66A0A0C4DH42 116 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 CEBPZOSA8MTT3 80 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 B3GALNT1O75752 331 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 APOHP02749 345 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 FCGR2BP31994 310 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 S100A5P33763 92 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 TFPI2P48307 235 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 SPCS3P61009 180 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 SUPT4H1P63272 117 aaKnown RBP4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 DHODHQ02127 395 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 RELQ04864 619 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 PVRIGQ6DKI7 326 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 ZFAND6Q6FIF0 208 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 TOMM20LQ6UXN7 152 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 SLC16A13Q7RTY0 426 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 LYZL2Q7Z4W2 148 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 TMED4Q7Z7H5 227 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 CCDC190Q86UF4 302 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 FAM219AQ8IW50 185 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 TOMM5Q8N4H5 51 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 MUC7Q8TAX7 377 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 ATP6V0BQ99437 205 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 RNF2Q99496 336 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 RHPN1-AS1Q9BWJ2 59 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 HIPK2Q9H2X6 1198 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 HEYLQ9NQ87 328 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 GAR1Q9NY12 217 aaKnown RBP4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 SMPXQ9UHP9 88 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 TMEM56-RWDD3S4R434 201 aa4.3□□□□□ -1.72
HMGB1P20-201ENST00000402555 IGHV7-4-1A0A0J9YVY3 117 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 A0A1B0GU03 582 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 LINC00854A0A1B0GVQ3 168 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 C15orf62A8K5M9 175 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 INS-IGF2F8WCM5 200 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 C3orf84H3BNL1 204 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 K7EMT4 169 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 CHEK1O14757 476 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 TSPAN4O14817 238 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 TMEM50AO95807 157 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 SULT1A3P0DMM9 295 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 SULT1A4P0DMN0 295 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 OPRK1P41145 380 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 NPBWR1P48145 328 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 SUB1P53999 127 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 BSXQ3C1V8 233 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 ODF3L2Q3SX64 289 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 TIGITQ495A1 244 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 AARDQ4LEZ3 155 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 NMSQ5H8A3 153 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 LILRB2Q8N423 598 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 GBGT1Q8N5D6 347 aa4.29□□□□□ -1.72
HMGB1P20-201ENST00000402555 TMEM116Q8NCL8 245 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms