RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 OR8I2Q8N0Y5 310 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 ZNF738Q8NE65 137 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 ORAOV1Q8WV07 137 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 BTF3L4Q96K17 158 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 NGBQ9NPG2 151 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 RPUSD1Q9UJJ7 312 aaKnown RBP6.3□□□□□ -1.4
HDAC9-201ENST00000401921 SRRM4A7MD48 611 aaKnown RBP6.3□□□□□ -1.4
HDAC9-201ENST00000401921 C17orf100A8MU93 164 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 SNURFLB1AK76 121 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 NDUFS8O00217 210 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 UPK2O00526 184 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 CT45A6P0DMU7 189 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 CT45A5P0DMU8 189 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 CT45A7P0DMV0 189 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 TIMP3P35625 211 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 DLX1P56177 255 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 VAMP3Q15836 100 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 MRPL54Q6P161 138 aaKnown RBP6.3□□□□□ -1.4
HDAC9-201ENST00000401921 OR52E5Q8NH55 327 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 ZCCHC14Q8WYQ9 949 aaKnown RBP6.3□□□□□ -1.4
HDAC9-201ENST00000401921 NPIPB3Q92617 1050 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 TXN2Q99757 166 aa6.3□□□□□ -1.4
HDAC9-201ENST00000401921 ANKHD1Q8IWZ3 2542 aaKnown RBP6.29□□□□□ -1.4
HDAC9-201ENST00000401921 TET2Q6N021 2002 aaPredicted RBP6.29□□□□□ -1.4
HDAC9-201ENST00000401921 IGF2RP11717 2491 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 TEX50A0A1B0GTY4 177 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 DPRXA6NFQ7 191 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 FAM90A27PA6NNH2 459 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 LYNX1G3V0Z9 82 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 LINC00869P0C866 280 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 LYNX1P0DP58 116 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 CRISP2P16562 243 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 SUB1P53999 127 aaKnown RBP eCLIP6.29□□□□□ -1.4
HDAC9-201ENST00000401921 ZNF788Q6ZQV5 615 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 TMEM167BQ9NRX6 74 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 A0A0G2JNJ9 132 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 CD33P20138 364 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 CFHR2P36980 270 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 TNXAQ16473 311 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 LYPD2Q6UXB3 125 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 OR5AU1Q8NGC0 362 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 TMEM170AQ8WVE7 144 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 Q9UFV3 132 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 TIMM8BQ9Y5J9 83 aaPredicted RBP6.29□□□□□ -1.4
HDAC9-201ENST00000401921 ADGRG4Q8IZF6 3080 aa6.29□□□□□ -1.4
HDAC9-201ENST00000401921 TRAV5A0A0B4J249 113 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 A0A1W2PRD5 423 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 A0A1W2PRF3 423 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 A0A1W2PRM7 423 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 H3BTX0 84 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 RPEL1Q2QD12 228 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 VMA21Q3ZAQ7 101 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 CENPWQ5EE01 88 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 TMEM144Q7Z5S9 345 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-201ENST00000401921 NEUROG1Q92886 237 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 RNASE7Q9H1E1 156 aaKnown RBP6.28□□□□□ -1.4
HDAC9-201ENST00000401921 FOXA2Q9Y261 457 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-201ENST00000401921 LINC00312Q9Y6C7 94 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 IGLV3-9A0A075B6K5 115 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 TRAV34A0A0B4J273 112 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 FAM90A9PA6NNJ1 464 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 RBPJQ06330 500 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 DIAPH2-AS1Q14236 149 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 VWC2Q2TAL6 325 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 FBLN7Q53RD9 439 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 SP5Q6BEB4 398 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-201ENST00000401921 TMEM256Q8N2U0 113 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 FAM169BQ8N8A8 192 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 OR1B1Q8NGR6 318 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 CMTM2Q8TAZ6 248 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 SMIM12Q96EX1 92 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 TXNDC17Q9BRA2 123 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 SSBP3Q9BWW4 388 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-201ENST00000401921 TMEM14BQ9NUH8 114 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 TMEM106BQ9NUM4 274 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 DMXL2Q8TDJ6 3036 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 CNIH1O95406 144 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 LHBP01229 141 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 NTF3P20783 257 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 PRCDQ00LT1 54 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 ADIPOQQ15848 244 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 HLA-DRB5Q30154 266 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 ASPHD1Q5U4P2 390 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 TMEM200BQ69YZ2 307 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 Q6ZVH6 145 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 MMD2Q8IY49 270 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 STPG4Q8N801 248 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 RAB1CQ92928 201 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 C20orf144Q9BQM9 153 aa6.28□□□□□ -1.4
HDAC9-201ENST00000401921 MRPL18Q9H0U6 180 aaKnown RBP6.28□□□□□ -1.4
HDAC9-201ENST00000401921 TRBV20OR9-2A0A075B6H5 130 aa6.27□□□□□ -1.41
HDAC9-201ENST00000401921 LOC105371242A0A075B767 164 aa6.27□□□□□ -1.41
HDAC9-201ENST00000401921 TM4SF5O14894 197 aa6.27□□□□□ -1.41
HDAC9-201ENST00000401921 MOSP00540 346 aa6.27□□□□□ -1.41
HDAC9-201ENST00000401921 C8orf88P0DMB2 117 aa6.27□□□□□ -1.41
HDAC9-201ENST00000401921 PMCHP20382 165 aa6.27□□□□□ -1.41
HDAC9-201ENST00000401921 ADMP35318 185 aa6.27□□□□□ -1.41
HDAC9-201ENST00000401921 HNRNPA3P51991 378 aaKnown RBP6.27□□□□□ -1.41
HDAC9-201ENST00000401921 RIPPLY3P57055 190 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms