RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 TMEM14BQ9NUH8 114 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 PLA2G2EQ9NZK7 142 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 WNK1Q9H4A3 2382 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 SEC14L6B5MCN3 397 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 CD5P06127 495 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 SLC25A4P12235 298 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 MSMO1Q15800 293 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 TMEM30BQ3MIR4 351 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 OSR1Q8TAX0 266 aaPredicted RBP9.28□□□□□ -0.92
SKA3-203ENST00000400018 CYTL1Q9NRR1 136 aa9.28□□□□□ -0.92
SKA3-203ENST00000400018 MRPL36Q9P0J6 103 aaKnown RBP9.28□□□□□ -0.92
SKA3-203ENST00000400018 C15orf62A8K5M9 175 aa9.27□□□□□ -0.92
SKA3-203ENST00000400018 NBR2O15453 112 aa9.27□□□□□ -0.92
SKA3-203ENST00000400018 PRB4P10163 310 aaPredicted RBP9.27□□□□□ -0.92
SKA3-203ENST00000400018 FHITP49789 147 aa9.27□□□□□ -0.92
SKA3-203ENST00000400018 MFAP2P55001 183 aa9.27□□□□□ -0.92
SKA3-203ENST00000400018 HIST3H2BBQ8N257 126 aa9.27□□□□□ -0.92
SKA3-203ENST00000400018 LFNGQ8NES3 379 aa9.27□□□□□ -0.92
SKA3-203ENST00000400018 TENM1Q9UKZ4 2725 aa9.27□□□□□ -0.92
SKA3-203ENST00000400018 SMCO3A2RU48 225 aa9.27□□□□□ -0.93
SKA3-203ENST00000400018 E5RGE8 158 aa9.27□□□□□ -0.93
SKA3-203ENST00000400018 PPP1R2P9O14990 202 aa9.27□□□□□ -0.93
SKA3-203ENST00000400018 AMY1AP04745 511 aa9.27□□□□□ -0.93
SKA3-203ENST00000400018 MC5RP33032 325 aa9.27□□□□□ -0.93
SKA3-203ENST00000400018 PRSS8Q16651 343 aa9.27□□□□□ -0.93
SKA3-203ENST00000400018 ECSCRQ19T08 205 aa9.27□□□□□ -0.93
SKA3-203ENST00000400018 THNSL2Q86YJ6 484 aa9.27□□□□□ -0.93
SKA3-203ENST00000400018 C1QL4Q86Z23 238 aa9.27□□□□□ -0.93
SKA3-203ENST00000400018 Q8N9W7 124 aa9.27□□□□□ -0.93
SKA3-203ENST00000400018 FOXC2Q99958 501 aa9.27□□□□□ -0.93
SKA3-203ENST00000400018 RSG1Q9BU20 258 aa9.27□□□□□ -0.93
SKA3-203ENST00000400018 LYRM2Q9NU23 88 aaPredicted RBP9.27□□□□□ -0.93
SKA3-203ENST00000400018 HOXA3O43365 443 aaPredicted RBP9.26□□□□□ -0.93
SKA3-203ENST00000400018 ACTL6BO94805 426 aa9.26□□□□□ -0.93
SKA3-203ENST00000400018 GATA2P23769 480 aaPredicted RBP9.26□□□□□ -0.93
SKA3-203ENST00000400018 KIR2DS2P43631 304 aa9.26□□□□□ -0.93
SKA3-203ENST00000400018 VDAC2P45880 294 aaPredicted RBP9.26□□□□□ -0.93
SKA3-203ENST00000400018 HSPE1P61604 102 aaKnown RBP9.26□□□□□ -0.93
SKA3-203ENST00000400018 CX3CL1P78423 397 aa9.26□□□□□ -0.93
SKA3-203ENST00000400018 VMA21Q3ZAQ7 101 aa9.26□□□□□ -0.93
SKA3-203ENST00000400018 LY6G6DO95868 133 aa9.26□□□□□ -0.93
SKA3-203ENST00000400018 CRYGBP07316 175 aa9.26□□□□□ -0.93
SKA3-203ENST00000400018 FXYD3Q14802 87 aa9.26□□□□□ -0.93
SKA3-203ENST00000400018 OR2T6Q8NHC8 308 aa9.26□□□□□ -0.93
SKA3-203ENST00000400018 SRSF12Q8WXF0 261 aaKnown RBP9.26□□□□□ -0.93
SKA3-203ENST00000400018 SLC25A33Q9BSK2 321 aa9.26□□□□□ -0.93
SKA3-203ENST00000400018 PARP11Q9NR21 331 aa9.26□□□□□ -0.93
SKA3-203ENST00000400018 SELENOKQ9Y6D0 94 aa9.26□□□□□ -0.93
SKA3-203ENST00000400018 ATRQ13535 2644 aa9.26□□□□□ -0.93
SKA3-203ENST00000400018 IGHV3OR16-8A0A075B7F1 116 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 IGHV3-35A0A0C4DH35 117 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 UBE2L5PA0A1B0GUS4 154 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 DUXBA0A1W2PPF3 345 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 HIST1H2BKO60814 126 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 HIST1H2BJP06899 126 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 HIST1H2BOP23527 126 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 CD1BP29016 333 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 HIST1H2BBP33778 126 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 HIST1H2BDP58876 126 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 HIST1H2BCP62807 126 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 HIST2H2BEQ16778 126 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 ZNF674Q2M3X9 581 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.25□□□□□ -0.93
SKA3-203ENST00000400018 PRSS57Q6UWY2 283 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 OR2T10Q8NGZ9 312 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 SVIPQ8NHG7 77 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 ASB13Q8WXK3 278 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 HIST1H2BHQ93079 126 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 MS4A10Q96PG2 267 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 HIST1H2BNQ99877 126 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 HIST1H2BMQ99879 126 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 BET1LQ9NYM9 111 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 C2CD3Q4AC94 2353 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 HMGB3O15347 200 aaKnown RBP9.25□□□□□ -0.93
SKA3-203ENST00000400018 C5orf64Q2M2E5 130 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 MINOS1Q5TGZ0 78 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 TMEM167AQ8TBQ9 72 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 C1orf159Q96HA4 380 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 PACRGQ96M98 296 aaPredicted RBP9.25□□□□□ -0.93
SKA3-203ENST00000400018 PLEKHA3Q9HB20 300 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 NDUFA4L2Q9NRX3 87 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 MINOS1-NBL1R4GNA1 71 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 LYL1P12980 280 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 ZNF329Q86UD4 541 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 SIGLECL1Q8N7X8 197 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 AQP10Q96PS8 301 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 VSIRQ9H7M9 311 aa9.25□□□□□ -0.93
SKA3-203ENST00000400018 FOXA2Q9Y261 457 aaPredicted RBP9.25□□□□□ -0.93
SKA3-203ENST00000400018 IGHV7-81A0A0B4J1V7 117 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 TEX22C9J3V5 150 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 INAFM1C9JVW0 142 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 ATP6V0E1O15342 81 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 OR2C1O95371 312 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 RPL27AP46776 148 aaKnown RBP9.24□□□□□ -0.93
SKA3-203ENST00000400018 AKR1C8PQ5T2L2 129 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 ASPHD1Q5U4P2 390 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 SMIM8Q96KF7 97 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 KIAA1456Q9P272 454 aa9.24□□□□□ -0.93
SKA3-203ENST00000400018 TBL2Q9Y4P3 447 aaKnown RBP9.24□□□□□ -0.93
SKA3-203ENST00000400018 PMS2P5A8MQ11 134 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms