RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 SRRQ9GZT4 340 aa6.33□□□□□ -1.4
USP16-202ENST00000399973 C19orf73Q9NVV2 129 aa6.33□□□□□ -1.4
USP16-202ENST00000399973 TMEM56-RWDD3S4R434 201 aa6.33□□□□□ -1.4
USP16-202ENST00000399973 TENM3Q9P273 2699 aa6.33□□□□□ -1.4
USP16-202ENST00000399973 STAB2Q8WWQ8 2551 aa6.33□□□□□ -1.4
USP16-202ENST00000399973 IGKV3-7A0A075B6H7 116 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 A0A0B4J2A0 478 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 INS-IGF2F8WCM5 200 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 SCGB2A1O75556 95 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 NPY1RP25929 384 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 HTR2BP41595 481 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 TFPI2P48307 235 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 CCR6P51684 374 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 SMCO1Q147U7 214 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 RBMS2Q15434 407 aaKnown RBP6.32□□□□□ -1.4
USP16-202ENST00000399973 HAGHQ16775 308 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 ANKRD55Q3KP44 614 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 LAMTOR1Q6IAA8 161 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 CENPSQ8N2Z9 138 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 TXN2Q99757 166 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 FAM110AQ9BQ89 295 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 SPATA25Q9BR10 227 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 GINS3Q9BRX5 216 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 HIPK2Q9H2X6 1198 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 RETNQ9HD89 108 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 MRPL36Q9P0J6 103 aaKnown RBP6.32□□□□□ -1.4
USP16-202ENST00000399973 UBQLN2Q9UHD9 624 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 SHPKQ9UHJ6 478 aa6.32□□□□□ -1.4
USP16-202ENST00000399973 HUWE1Q7Z6Z7 4374 aaKnown RBP6.31□□□□□ -1.4
USP16-202ENST00000399973 TRAV25A0A0B4J276 109 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 IGHV3-66A0A0C4DH42 116 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 IGHV7-4-1A0A0J9YVY3 117 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 RPS10-NUDT3A0A1W2PQS6 291 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 OR4C46A6NHA9 309 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 C15orf62A8K5M9 175 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 A8MZ25 164 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 IFNA10P01566 189 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 C8orf88P0DMB2 117 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 FCGR2BP31994 310 aaPredicted RBP6.31□□□□□ -1.4
USP16-202ENST00000399973 RND2P52198 227 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 TNFRSF9Q07011 255 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 PPP1R1AQ13522 171 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 BAK1Q16611 211 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 BSXQ3C1V8 233 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 AARDQ4LEZ3 155 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 TMEM128Q5BJH2 165 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 NMSQ5H8A3 153 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 ZNF600Q6ZNG1 722 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 TMEM116Q8NCL8 245 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 OR52E5Q8NH55 327 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 DTD1Q8TEA8 209 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 ACY3Q96HD9 319 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 SPAG8Q99932 426 aaPredicted RBP6.31□□□□□ -1.4
USP16-202ENST00000399973 SLC25A21Q9BQT8 299 aaPredicted RBP6.31□□□□□ -1.4
USP16-202ENST00000399973 TM2D3Q9BRN9 247 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 RHPN1-AS1Q9BWJ2 59 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 RBKSQ9H477 322 aa6.31□□□□□ -1.4
USP16-202ENST00000399973 FNDC4Q9H6D8 234 aaPredicted RBP6.31□□□□□ -1.4
USP16-202ENST00000399973 PUS1Q9Y606 427 aaKnown RBP eCLIP6.31□□□□□ -1.4
USP16-202ENST00000399973 PIGBOS1A0A0B4J2F0 54 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 K7EMT4 169 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 TSPAN4O14817 238 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 CLN5O75503 358 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 HOXB5P09067 269 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 IAPPP10997 89 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 IL7P13232 177 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 BMI1P35226 326 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 SMCPP49901 116 aaPredicted RBP6.3□□□□□ -1.4
USP16-202ENST00000399973 MLANAQ16655 118 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 TIGITQ495A1 244 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 TOMM20LQ6UXN7 152 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 GBGT1Q8N5D6 347 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 DEDD2Q8WXF8 326 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 ZNF414Q96IQ9 312 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 RNF2Q99496 336 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 ZFAND3Q9H8U3 227 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 NDUFA13Q9P0J0 144 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 HSPB7Q9UBY9 170 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 SMPXQ9UHP9 88 aa6.3□□□□□ -1.4
USP16-202ENST00000399973 PAIP2BQ9ULR5 123 aaKnown RBP6.3□□□□□ -1.4
USP16-202ENST00000399973 TRAV14DV4A0A0A6YYC5 116 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 A0A1B0GU03 582 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 DUXBA0A1W2PPF3 345 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 RBMY1BA6NDE4 496 aaKnown RBP6.29□□□□□ -1.4
USP16-202ENST00000399973 RBMY1EA6NEQ0 496 aaKnown RBP6.29□□□□□ -1.4
USP16-202ENST00000399973 NAP1L6A6NFF2 107 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 CENPXA8MT69 81 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 CHEK1O14757 476 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 NDUFB6O95139 128 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 SFT2D2O95562 160 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 TMEM50AO95807 157 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 IFNA4P05014 189 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 RBMY1DP0C7P1 496 aaKnown RBP6.29□□□□□ -1.4
USP16-202ENST00000399973 RPL11P62913 178 aaKnown RBP6.29□□□□□ -1.4
USP16-202ENST00000399973 C4orf46Q504U0 113 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 C2orf83Q53S99 150 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 PVRIGQ6DKI7 326 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 TCF24Q7RTU0 167 aa6.29□□□□□ -1.4
USP16-202ENST00000399973 RNASEH2CQ8TDP1 164 aaKnown RBP6.29□□□□□ -1.4
USP16-202ENST00000399973 TMEM170AQ8WVE7 144 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms