RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 SRP19P09132 144 aaKnown RBP11.32□□□□□ -0.6
LDLRAD4-203ENST00000399848 ST20Q9HBF5 79 aa11.32□□□□□ -0.6
LDLRAD4-203ENST00000399848 IGHV4-39P01824 125 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 ORMDL2Q53FV1 153 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 LAMTOR2Q9Y2Q5 125 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 LINC00614P0C842 121 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 IFITM2Q01629 132 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 TMEM86BQ8N661 226 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 USF3Q68DE3 2245 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 KBTBD11-OT1A0A1B0GTJ5 212 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 LINC01549A6NIU2 74 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 GGTLC3B5MD39 225 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 LINC01590Q5TEZ4 76 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 C20orf204Q6ZNR8 217 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 PPP1R27Q86WC6 154 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 ST6GALNAC3Q8NDV1 305 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 ZIC4Q8N9L1 334 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 ST6GALNAC6Q969X2 333 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 ADAMTS9Q9P2N4 1935 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 TRAV12-3A0A0B4J271 114 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 TGIF1Q15583 401 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 IGHV3-66A0A0C4DH42 116 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 FABP5P3A8MUU1 101 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 CYSLTR1Q9Y271 337 aa11.31□□□□□ -0.6
LDLRAD4-203ENST00000399848 SLC25A45Q8N413 288 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 HBDP02042 147 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 MED13LQ71F56 2210 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 PROB1E7EW31 1015 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 IGHV3OR16-13A0A075B7E8 117 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 IGHV3-74A0A0B4J1X5 117 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 SAA1P0DJI8 122 aaPredicted RBP11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 CRYBA2P53672 197 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 SIGMAR1Q99720 223 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 SLC50A1Q9BRV3 221 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 NRN1Q9NPD7 142 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 PLXNB1O43157 2135 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 IGHV3-49A0A0A0MS15 119 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 CDK2AP2O75956 126 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 Q5BKY6 102 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 GNB1LQ9BYB4 327 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 FBXL15Q9H469 300 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 TRAV21A0A0B4J279 112 aa11.3□□□□□ -0.6
LDLRAD4-203ENST00000399848 TRAV8-4A0A0B4J246 113 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 C1QCP02747 245 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 CD7P09564 240 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 PCOLCEQ15113 449 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 LINC00312Q9Y6C7 94 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 CEP192Q8TEP8 1941 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 IGKV1D-42A0A075B6H8 117 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 H3BUT2 72 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 CKS1BP61024 79 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 CDCP2Q5VXM1 449 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 TMEM167AQ8TBQ9 72 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 CHCHD1Q96BP2 118 aaKnown RBP11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 SPG11Q96JI7 2443 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 IGHV3-23P01764 117 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 SMIM10L1P0DMW3 83 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 SMIM10Q96HG1 83 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 LY6DQ14210 128 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 SAP25Q8TEE9 199 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 VKORC1Q9BQB6 163 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 ZNF703Q9H7S9 590 aaPredicted RBP11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 CCDC168Q8NDH2 2452 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 TIMM23O14925 209 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 FOXL2P58012 376 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 CCL20P78556 96 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 VWA8A3KMH1 1905 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 F2Z2F3 143 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 SERF1AO75920 110 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 ERVK11-1P61568 191 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 MEGF9Q9H1U4 602 aa11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 NHP2Q9NX24 153 aaKnown RBP11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 SONP18583 2426 aaKnown RBP11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 EIF4EBP2Q13542 120 aaPredicted RBP11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 RNASE6Q93091 150 aaKnown RBP11.29□□□□□ -0.6
LDLRAD4-203ENST00000399848 C12orf77C9JDV5 145 aa11.28□□□□□ -0.6
LDLRAD4-203ENST00000399848 C7orf69Q9H7B7 122 aa11.28□□□□□ -0.6
LDLRAD4-203ENST00000399848 EFEMP2O95967 443 aa11.28□□□□□ -0.6
LDLRAD4-203ENST00000399848 PRSS22Q9GZN4 317 aa11.28□□□□□ -0.6
LDLRAD4-203ENST00000399848 ZP1P60852 638 aa11.28□□□□□ -0.6
LDLRAD4-203ENST00000399848 SEC11AP67812 179 aa11.28□□□□□ -0.6
LDLRAD4-203ENST00000399848 TMEM170AQ8WVE7 144 aa11.28□□□□□ -0.6
LDLRAD4-203ENST00000399848 TRAV9-2A0A087WT02 112 aa11.28□□□□□ -0.6
LDLRAD4-203ENST00000399848 CLEC19AQ6UXS0 136 aa11.28□□□□□ -0.6
LDLRAD4-203ENST00000399848 NR2C2APQ86WQ0 139 aa11.28□□□□□ -0.6
LDLRAD4-203ENST00000399848 STHQ8IWL8 128 aa11.28□□□□□ -0.6
LDLRAD4-203ENST00000399848 FNDC4Q9H6D8 234 aaPredicted RBP11.28□□□□□ -0.6
LDLRAD4-203ENST00000399848 A0A1W2PRX2 142 aa11.28□□□□□ -0.6
LDLRAD4-203ENST00000399848 LDLRAD2Q5SZI1 272 aa11.28□□□□□ -0.6
LDLRAD4-203ENST00000399848 HTN3P15516 51 aa11.27□□□□□ -0.6
LDLRAD4-203ENST00000399848 PVRIGQ6DKI7 326 aa11.27□□□□□ -0.6
LDLRAD4-203ENST00000399848 TMEM144Q7Z5S9 345 aa11.27□□□□□ -0.6
LDLRAD4-203ENST00000399848 SP7Q8TDD2 431 aaPredicted RBP11.27□□□□□ -0.6
LDLRAD4-203ENST00000399848 TICRRQ7Z2Z1 1910 aa11.27□□□□□ -0.6
LDLRAD4-203ENST00000399848 RNASE7Q9H1E1 156 aaKnown RBP11.27□□□□□ -0.61
LDLRAD4-203ENST00000399848 FNDC1Q4ZHG4 1894 aaPredicted RBP11.27□□□□□ -0.61
LDLRAD4-203ENST00000399848 FBLN7Q53RD9 439 aa11.27□□□□□ -0.61
LDLRAD4-203ENST00000399848 WFDC6Q9BQY6 131 aa11.27□□□□□ -0.61
LDLRAD4-203ENST00000399848 NDUFAF3Q9BU61 184 aa11.27□□□□□ -0.61
LDLRAD4-203ENST00000399848 A8MWV9 139 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms