RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 ARPC1AQ92747 370 aa11.44□□□□□ -0.58
SCAF4-202ENST00000399804 TMEM18Q96B42 140 aa11.44□□□□□ -0.58
SCAF4-202ENST00000399804 MRPL32Q9BYC8 188 aaKnown RBP11.44□□□□□ -0.58
SCAF4-202ENST00000399804 MYO18BQ8IUG5 2567 aa11.44□□□□□ -0.58
SCAF4-202ENST00000399804 MYO15AQ9UKN7 3530 aa11.44□□□□□ -0.58
SCAF4-202ENST00000399804 PAX6P26367 422 aa11.43□□□□□ -0.58
SCAF4-202ENST00000399804 LINC00469Q8N7U9 141 aa11.43□□□□□ -0.58
SCAF4-202ENST00000399804 PITPNC1Q9UKF7 332 aa11.43□□□□□ -0.58
SCAF4-202ENST00000399804 NAV2Q8IVL1 2488 aa11.43□□□□□ -0.58
SCAF4-202ENST00000399804 TSTD3H0UI37 97 aa11.43□□□□□ -0.58
SCAF4-202ENST00000399804 P01737 135 aa11.43□□□□□ -0.58
SCAF4-202ENST00000399804 GRAMD2BQ96HH9 432 aa11.43□□□□□ -0.58
SCAF4-202ENST00000399804 ZFYVE26Q68DK2 2539 aa11.43□□□□□ -0.58
SCAF4-202ENST00000399804 IGHV3OR16-8A0A075B7F1 116 aa11.43□□□□□ -0.58
SCAF4-202ENST00000399804 M0QZ24 198 aa11.43□□□□□ -0.58
SCAF4-202ENST00000399804 SOD3P08294 240 aa11.43□□□□□ -0.58
SCAF4-202ENST00000399804 C2orf83Q53S99 150 aa11.43□□□□□ -0.58
SCAF4-202ENST00000399804 VMO1Q7Z5L0 202 aa11.43□□□□□ -0.58
SCAF4-202ENST00000399804 CTSZQ9UBR2 303 aa11.43□□□□□ -0.58
SCAF4-202ENST00000399804 TRAV30A0A087WSZ9 112 aa11.42□□□□□ -0.58
SCAF4-202ENST00000399804 SCO2A0A1W2PP80 73 aa11.42□□□□□ -0.58
SCAF4-202ENST00000399804 NBEAP1P0C6P0 100 aa11.42□□□□□ -0.58
SCAF4-202ENST00000399804 IER3P46695 156 aa11.42□□□□□ -0.58
SCAF4-202ENST00000399804 TMEM177Q53S58 311 aa11.42□□□□□ -0.58
SCAF4-202ENST00000399804 TPTE2P1Q5T6R2 138 aa11.42□□□□□ -0.58
SCAF4-202ENST00000399804 PRNTQ86SH4 94 aa11.42□□□□□ -0.58
SCAF4-202ENST00000399804 ZNF439Q8NDP4 499 aa11.42□□□□□ -0.58
SCAF4-202ENST00000399804 TGFAP01135 160 aa11.42□□□□□ -0.58
SCAF4-202ENST00000399804 MGST2Q99735 147 aa11.42□□□□□ -0.58
SCAF4-202ENST00000399804 IGHV3OR16-13A0A075B7E8 117 aa11.42□□□□□ -0.58
SCAF4-202ENST00000399804 IGHV3-74A0A0B4J1X5 117 aa11.42□□□□□ -0.58
SCAF4-202ENST00000399804 NDUFS7O75251 213 aa11.42□□□□□ -0.58
SCAF4-202ENST00000399804 AGAP20933 346 aa11.42□□□□□ -0.58
SCAF4-202ENST00000399804 MAS1LP35410 378 aa11.42□□□□□ -0.58
SCAF4-202ENST00000399804 FBXL7Q9UJT9 491 aa11.42□□□□□ -0.58
SCAF4-202ENST00000399804 KLF2Q9Y5W3 355 aaPredicted RBP11.42□□□□□ -0.58
SCAF4-202ENST00000399804 DIAPH2-AS1Q14236 149 aa11.41□□□□□ -0.58
SCAF4-202ENST00000399804 OR5R1Q8NH85 324 aa11.41□□□□□ -0.58
SCAF4-202ENST00000399804 SDF2L1Q9HCN8 221 aa11.41□□□□□ -0.58
SCAF4-202ENST00000399804 C21orf62Q9NYP8 219 aa11.41□□□□□ -0.58
SCAF4-202ENST00000399804 TRAV1-1A0A0B4J248 108 aa11.41□□□□□ -0.58
SCAF4-202ENST00000399804 CXorf65A6NEN9 183 aa11.41□□□□□ -0.58
SCAF4-202ENST00000399804 SIGLEC9Q9Y336 463 aa11.41□□□□□ -0.58
SCAF4-202ENST00000399804 NDUFS6O75380 124 aaKnown RBP11.41□□□□□ -0.58
SCAF4-202ENST00000399804 ADORA2A-AS1P86434 159 aa11.41□□□□□ -0.58
SCAF4-202ENST00000399804 IBA57Q5T440 356 aaKnown RBP11.41□□□□□ -0.58
SCAF4-202ENST00000399804 SIGLECL1Q8N7X8 197 aa11.41□□□□□ -0.58
SCAF4-202ENST00000399804 PRO1933Q9H354 126 aa11.41□□□□□ -0.58
SCAF4-202ENST00000399804 SEPSECSQ9HD40 501 aaKnown RBP11.41□□□□□ -0.58
SCAF4-202ENST00000399804 TMEM8BA6NDV4 472 aa11.41□□□□□ -0.58
SCAF4-202ENST00000399804 SNURFLB1AK76 121 aa11.41□□□□□ -0.58
SCAF4-202ENST00000399804 HIST1H1EP10412 219 aaKnown RBP11.41□□□□□ -0.58
SCAF4-202ENST00000399804 PRTN3P24158 256 aa11.41□□□□□ -0.58
SCAF4-202ENST00000399804 TRAV34A0A0B4J273 112 aa11.4□□□□□ -0.58
SCAF4-202ENST00000399804 BMPR1BO00238 502 aa11.4□□□□□ -0.58
SCAF4-202ENST00000399804 HSBP1O75506 76 aa11.4□□□□□ -0.58
SCAF4-202ENST00000399804 CENPWQ5EE01 88 aa11.4□□□□□ -0.58
SCAF4-202ENST00000399804 OR5AN1Q8NGI8 311 aa11.4□□□□□ -0.58
SCAF4-202ENST00000399804 KAAG1Q9UBP8 84 aa11.4□□□□□ -0.58
SCAF4-202ENST00000399804 LAMA1P25391 3075 aa11.4□□□□□ -0.58
SCAF4-202ENST00000399804 C5orf52A6NGY3 159 aa11.4□□□□□ -0.58
SCAF4-202ENST00000399804 H0Y8G0 127 aa11.4□□□□□ -0.58
SCAF4-202ENST00000399804 RAB4AP20338 218 aa11.4□□□□□ -0.58
SCAF4-202ENST00000399804 SPATA31B1PQ5VZV4 182 aa11.4□□□□□ -0.58
SCAF4-202ENST00000399804 SPSB3Q6PJ21 355 aa11.4□□□□□ -0.58
SCAF4-202ENST00000399804 TMEM14BQ9NUH8 114 aa11.4□□□□□ -0.58
SCAF4-202ENST00000399804 HIVEP3Q5T1R4 2406 aa11.4□□□□□ -0.58
SCAF4-202ENST00000399804 CRISP2P16562 243 aa11.4□□□□□ -0.59
SCAF4-202ENST00000399804 MFAP2P55001 183 aa11.4□□□□□ -0.59
SCAF4-202ENST00000399804 KLF17Q5JT82 389 aaPredicted RBP11.4□□□□□ -0.59
SCAF4-202ENST00000399804 HAPLN4Q86UW8 402 aa11.4□□□□□ -0.59
SCAF4-202ENST00000399804 SRD5A3Q9H8P0 318 aa11.4□□□□□ -0.59
SCAF4-202ENST00000399804 COL5A1P20908 1838 aaPredicted RBP11.4□□□□□ -0.59
SCAF4-202ENST00000399804 TMSB15BA0A087X1C1 80 aa11.39□□□□□ -0.59
SCAF4-202ENST00000399804 TRAV40A0A0B4J280 105 aa11.39□□□□□ -0.59
SCAF4-202ENST00000399804 TCRBV4S1A1TA0A5B7 111 aa11.39□□□□□ -0.59
SCAF4-202ENST00000399804 M0R1W7 72 aa11.39□□□□□ -0.59
SCAF4-202ENST00000399804 LEMD1Q68G75 181 aa11.39□□□□□ -0.59
SCAF4-202ENST00000399804 SRRM4A7MD48 611 aaKnown RBP11.39□□□□□ -0.59
SCAF4-202ENST00000399804 SEC14L6B5MCN3 397 aa11.39□□□□□ -0.59
SCAF4-202ENST00000399804 RNASE2P10153 161 aaKnown RBP11.39□□□□□ -0.59
SCAF4-202ENST00000399804 AREGP15514 252 aa11.39□□□□□ -0.59
SCAF4-202ENST00000399804 S100A4P26447 101 aaKnown RBP11.39□□□□□ -0.59
SCAF4-202ENST00000399804 EXPH5Q8NEV8 1989 aa11.39□□□□□ -0.59
SCAF4-202ENST00000399804 VENTXO95231 258 aa11.39□□□□□ -0.59
SCAF4-202ENST00000399804 PYYP10082 97 aa11.39□□□□□ -0.59
SCAF4-202ENST00000399804 WDR73Q6P4I2 378 aa11.39□□□□□ -0.59
SCAF4-202ENST00000399804 ZNF833PQ6ZTB9 187 aa11.39□□□□□ -0.59
SCAF4-202ENST00000399804 OR2D3Q8NGH3 330 aa11.39□□□□□ -0.59
SCAF4-202ENST00000399804 CLEC5AQ9NY25 188 aa11.39□□□□□ -0.59
SCAF4-202ENST00000399804 IGHV3-49A0A0A0MS15 119 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 STAG3L2P0CL84 134 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 STAG3L3P0CL85 134 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 GPR183P32249 361 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 RPL23P62829 140 aaKnown RBP11.38□□□□□ -0.59
SCAF4-202ENST00000399804 PMS2P11Q13670 270 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 LHFPL4Q7Z7J7 247 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 OR1P1Q8NH06 330 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 DPF1Q92782 380 aa11.38□□□□□ -0.59
SCAF4-202ENST00000399804 PGPEP1LA6NFU8 196 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms