RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 SSC4DQ8WTU2 575 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 C2orf50Q96LR7 162 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 NKX6-2Q9C056 277 aaPredicted RBP5□□□□□ -1.61
TRAPPC13-202ENST00000399438 CCL28Q9NRJ3 127 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 HSPB8Q9UJY1 196 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZGRF1Q86YA3 2104 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 RIPPLY3P57055 190 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 TAS2R46P59540 309 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 SEC61BP60468 96 aaKnown RBP5□□□□□ -1.61
TRAPPC13-202ENST00000399438 HERV-K104P61576 105 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 SSBP1Q04837 148 aaKnown RBP5□□□□□ -1.61
TRAPPC13-202ENST00000399438 TEX36Q5VZQ5 186 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 LHFPL1Q86WI0 220 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 PP6455Q8WZ26 134 aa5□□□□□ -1.61
TRAPPC13-202ENST00000399438 DEGS1O15121 323 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 DEFA4P12838 97 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 WT1P19544 449 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 PPP1CCP36873 323 aaKnown RBP4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 LHX2P50458 406 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 LYG1Q8N1E2 194 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZFP62Q8NB50 900 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 KCNJ16Q9NPI9 418 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 SERTAD4Q9NUC0 356 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 SPG11Q96JI7 2443 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 TMEM218A2RU14 115 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 DEFB108AA8MXU0 73 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 BUB3O43684 328 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 MMP7P09237 267 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 IAPPP10997 89 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 SLC25A4P12235 298 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 USF1P22415 310 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 HSPE1P61604 102 aaKnown RBP4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 HERPUD1Q15011 391 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 MIDNQ504T8 468 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 PRSS54Q6PEW0 395 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZNF818PQ6ZRF7 136 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 C1orf158Q8N1D5 194 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 RFESDQ8TAC1 157 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 FAM213BQ8TBF2 198 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 DCHS2Q6V1P9 2916 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 A0A087WZ39 114 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 IGHV3-43A0A0B4J1X8 118 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 IGKV1-6A0A0C4DH72 117 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 A0A0G2JRQ6 117 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 LYRM9A8MSI8 78 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 KRBOX1C9JBD0 128 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 GNG7O60262 68 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 SFTA3P0C7M3 94 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 IGHV3-43DP0DP04 118 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 TSPOP30536 169 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 RBM11P57052 281 aaKnown RBP4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 CCL20P78556 96 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 TMEM267Q0VDI3 215 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 SPATA31B1PQ5VZV4 182 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 MDP1Q86V88 176 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 RARRES2Q99969 163 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 OR2J1Q9GZK6 312 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 EIF5A2Q9GZV4 153 aaKnown RBP4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 RNASE7Q9H1E1 156 aaKnown RBP4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 PKIGQ9Y2B9 76 aa4.99□□□□□ -1.61
TRAPPC13-202ENST00000399438 IGHV2OR16-5A0A0B4J2B6 119 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 F6UZH7 168 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 WDR1O75083 606 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 PPYP01298 95 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 IGLV3-1P01715 115 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 IGHV4-31P0DP07 118 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 CHRNB4P30926 498 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 GPR183P32249 361 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 BAXQ07812 192 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 C1orf194Q5T5A4 169 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 HSD17B13Q7Z5P4 300 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 SRSF12Q8WXF0 261 aaKnown RBP4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 IP6K3Q96PC2 410 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 NAA60Q9H7X0 242 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 Q9HAA7 133 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 SPRR3Q9UBC9 169 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 BOKQ9UMX3 212 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 TNCP24821 2201 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 CD300LBA8K4G0 201 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 SNURFLB1AK76 121 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 PDCD6O75340 191 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 CLDN14O95500 239 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 APOC4P55056 127 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZNF154Q13106 437 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 EIF3IQ13347 325 aaKnown RBP4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 NEGR1Q7Z3B1 354 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 ARL11Q969Q4 196 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 NMES1Q9C002 83 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZNF286AQ9HBT8 521 aa4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 ZNF256Q9Y2P7 627 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC13-202ENST00000399438 BSNQ9UPA5 3926 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 C20orf202A1L168 122 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 CRYM-AS1A6NIL9 109 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 C15orf62A8K5M9 175 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 DIRC3C9JPN6 131 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 TMEM187Q14656 261 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 Q6ZVQ6 151 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 RPS10P5Q9NQ39 176 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 UQCC1Q9NVA1 299 aa4.97□□□□□ -1.61
TRAPPC13-202ENST00000399438 WNK2Q9Y3S1 2297 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms