RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 C18orf12Q96KH6 178 aa10.99□□□□□ -0.65
ITSN1-208ENST00000399349 VSIRQ9H7M9 311 aa10.99□□□□□ -0.65
ITSN1-208ENST00000399349 LINC00527Q9UJ94 153 aa10.99□□□□□ -0.65
ITSN1-208ENST00000399349 TMEM144Q7Z5S9 345 aa10.99□□□□□ -0.65
ITSN1-208ENST00000399349 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.99□□□□□ -0.65
ITSN1-208ENST00000399349 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.98□□□□□ -0.65
ITSN1-208ENST00000399349 ZNF883P0CG24 379 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 ASIPP42127 132 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 LRTM2Q8N967 370 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 F8VVB4 439 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 F8VWA3 439 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 J3QRE1 110 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 CA1P00915 261 aaPredicted RBP10.98□□□□□ -0.65
ITSN1-208ENST00000399349 FOXF2Q12947 444 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 ZNF407Q9C0G0 2248 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 RGPD3A6NKT7 1758 aaPredicted RBP10.98□□□□□ -0.65
ITSN1-208ENST00000399349 ZNF418Q8TF45 676 aaPredicted RBP10.98□□□□□ -0.65
ITSN1-208ENST00000399349 SCGB3A1Q96QR1 104 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 SPOCK3Q9BQ16 436 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 TOMM7Q9P0U1 55 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 LRRC37AA6NMS7 1700 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 LRRK1Q38SD2 2015 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 LOC102723996A0A087X1L8 192 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 NPFFO15130 113 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 APOMO95445 188 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 C10orf55Q5SWW7 151 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 FAM168AQ92567 244 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 TNFRSF18Q9Y5U5 241 aa10.98□□□□□ -0.65
ITSN1-208ENST00000399349 DOCK9Q9BZ29 2069 aa10.97□□□□□ -0.65
ITSN1-208ENST00000399349 UPK2O00526 184 aa10.97□□□□□ -0.65
ITSN1-208ENST00000399349 CEACAM1P13688 526 aa10.97□□□□□ -0.65
ITSN1-208ENST00000399349 RNASE4P34096 147 aaKnown RBP10.97□□□□□ -0.65
ITSN1-208ENST00000399349 BRCA1P38398 1863 aaKnown RBP10.97□□□□□ -0.65
ITSN1-208ENST00000399349 MEF2CQ06413 473 aaPredicted RBP10.97□□□□□ -0.65
ITSN1-208ENST00000399349 CRIPAKQ8N1N5 446 aa10.97□□□□□ -0.65
ITSN1-208ENST00000399349 CACNG8Q8WXS5 425 aa10.97□□□□□ -0.65
ITSN1-208ENST00000399349 GTF3AQ92664 365 aaKnown RBP10.97□□□□□ -0.65
ITSN1-208ENST00000399349 WFDC1Q9HC57 220 aa10.97□□□□□ -0.65
ITSN1-208ENST00000399349 OR9G9P0C7N8 305 aa10.97□□□□□ -0.65
ITSN1-208ENST00000399349 OR10W1Q8NGF6 305 aa10.97□□□□□ -0.65
ITSN1-208ENST00000399349 MRPL16Q9NX20 251 aaKnown RBP10.97□□□□□ -0.65
ITSN1-208ENST00000399349 SPRR3Q9UBC9 169 aa10.97□□□□□ -0.65
ITSN1-208ENST00000399349 HEPN1Q6WQI6 88 aa10.97□□□□□ -0.65
ITSN1-208ENST00000399349 ZNF497Q6ZNH5 498 aa10.97□□□□□ -0.65
ITSN1-208ENST00000399349 FAM89BQ8N5H3 189 aa10.97□□□□□ -0.65
ITSN1-208ENST00000399349 ZIC4Q8N9L1 334 aa10.97□□□□□ -0.65
ITSN1-208ENST00000399349 FER1L6-AS1Q8NA97 138 aa10.97□□□□□ -0.65
ITSN1-208ENST00000399349 C5orf63A6NC05 138 aa10.97□□□□□ -0.65
ITSN1-208ENST00000399349 TTC28Q96AY4 2481 aa10.97□□□□□ -0.65
ITSN1-208ENST00000399349 IGKV3D-20A0A0C4DH25 116 aa10.96□□□□□ -0.65
ITSN1-208ENST00000399349 TYMSP04818 313 aa10.96□□□□□ -0.65
ITSN1-208ENST00000399349 CD5P06127 495 aa10.96□□□□□ -0.65
ITSN1-208ENST00000399349 ID3Q02535 119 aa10.96□□□□□ -0.65
ITSN1-208ENST00000399349 JOSD1Q15040 202 aaPredicted RBP10.96□□□□□ -0.65
ITSN1-208ENST00000399349 RNF144BQ7Z419 303 aa10.96□□□□□ -0.65
ITSN1-208ENST00000399349 C11orf44Q8N8P7 122 aa10.96□□□□□ -0.65
ITSN1-208ENST00000399349 WFDC12Q8WWY7 111 aa10.96□□□□□ -0.65
ITSN1-208ENST00000399349 DUX3Q96PT4 197 aa10.96□□□□□ -0.65
ITSN1-208ENST00000399349 NOTCH2Q04721 2471 aa10.96□□□□□ -0.65
ITSN1-208ENST00000399349 PLXNA1Q9UIW2 1896 aa10.96□□□□□ -0.65
ITSN1-208ENST00000399349 SMIM13P0DJ93 91 aa10.96□□□□□ -0.65
ITSN1-208ENST00000399349 FBLN7Q53RD9 439 aa10.96□□□□□ -0.65
ITSN1-208ENST00000399349 ZNF324BQ6AW86 544 aaPredicted RBP10.96□□□□□ -0.65
ITSN1-208ENST00000399349 JKAMPQ9P055 326 aa10.96□□□□□ -0.65
ITSN1-208ENST00000399349 FOXD3Q9UJU5 478 aaPredicted RBP10.96□□□□□ -0.65
ITSN1-208ENST00000399349 RFNGQ9Y644 331 aa10.96□□□□□ -0.65
ITSN1-208ENST00000399349 C15orf61A6NNL5 157 aa10.96□□□□□ -0.66
ITSN1-208ENST00000399349 YPEL1O60688 119 aa10.96□□□□□ -0.66
ITSN1-208ENST00000399349 NDUFA3O95167 84 aa10.96□□□□□ -0.66
ITSN1-208ENST00000399349 TTC9CQ8N5M4 171 aa10.96□□□□□ -0.66
ITSN1-208ENST00000399349 NUP37Q8NFH4 326 aa10.96□□□□□ -0.66
ITSN1-208ENST00000399349 RNASEH2CQ8TDP1 164 aaKnown RBP10.96□□□□□ -0.66
ITSN1-208ENST00000399349 YPEL2Q96QA6 119 aa10.96□□□□□ -0.66
ITSN1-208ENST00000399349 HIST1H2BLQ99880 126 aa10.96□□□□□ -0.66
ITSN1-208ENST00000399349 NBR2O15453 112 aa10.96□□□□□ -0.66
ITSN1-208ENST00000399349 HTN3P15516 51 aa10.96□□□□□ -0.66
ITSN1-208ENST00000399349 RTN4RL2Q86UN3 420 aa10.96□□□□□ -0.66
ITSN1-208ENST00000399349 PRDM13Q9H4Q3 707 aa10.96□□□□□ -0.66
ITSN1-208ENST00000399349 NRN1Q9NPD7 142 aa10.96□□□□□ -0.66
ITSN1-208ENST00000399349 PAPPA-AS1Q5QFB9 102 aa10.95□□□□□ -0.66
ITSN1-208ENST00000399349 C1QL4Q86Z23 238 aa10.95□□□□□ -0.66
ITSN1-208ENST00000399349 OCC1Q8TAD7 63 aa10.95□□□□□ -0.66
ITSN1-208ENST00000399349 IGHV1-18A0A0C4DH31 117 aa10.95□□□□□ -0.66
ITSN1-208ENST00000399349 CCL1P22362 96 aa10.95□□□□□ -0.66
ITSN1-208ENST00000399349 DUTP33316 252 aaKnown RBP10.95□□□□□ -0.66
ITSN1-208ENST00000399349 ORMDL3Q8N138 153 aa10.95□□□□□ -0.66
ITSN1-208ENST00000399349 DNAL4O96015 105 aa10.95□□□□□ -0.66
ITSN1-208ENST00000399349 CIARTQ8N365 385 aaPredicted RBP10.95□□□□□ -0.66
ITSN1-208ENST00000399349 FBLN5Q9UBX5 448 aa10.95□□□□□ -0.66
ITSN1-208ENST00000399349 ARID2Q68CP9 1835 aa10.95□□□□□ -0.66
ITSN1-208ENST00000399349 PLCE1Q9P212 2302 aa10.95□□□□□ -0.66
ITSN1-208ENST00000399349 A0A0G2JLM5 398 aa10.95□□□□□ -0.66
ITSN1-208ENST00000399349 ADMP35318 185 aa10.95□□□□□ -0.66
ITSN1-208ENST00000399349 HIST3H2BBQ8N257 126 aa10.95□□□□□ -0.66
ITSN1-208ENST00000399349 NEU4Q8WWR8 484 aaPredicted RBP10.95□□□□□ -0.66
ITSN1-208ENST00000399349 FMC1Q96HJ9 113 aa10.95□□□□□ -0.66
ITSN1-208ENST00000399349 TMEM133Q9H2Q1 129 aa10.95□□□□□ -0.66
ITSN1-208ENST00000399349 TRAV5A0A0B4J249 113 aa10.94□□□□□ -0.66
ITSN1-208ENST00000399349 FANCMQ8IYD8 2048 aa10.94□□□□□ -0.66
ITSN1-208ENST00000399349 ZFP36L1Q07352 338 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms