RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 A0A1W2PRM7 423 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 VDAC2P45880 294 aaPredicted RBP12.22□□□□□ -0.45
COL25A1-201ENST00000399126 LCN2P80188 198 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 DLK1P80370 383 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 ZNF616Q08AN1 781 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 ZNF429Q86V71 674 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 RNF2Q99496 336 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 PEF1Q9UBV8 284 aaKnown RBP12.22□□□□□ -0.45
COL25A1-201ENST00000399126 TRAV25A0A0B4J276 109 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 BUB1B-PAK6H3BSN5 160 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 K7EQM0 130 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 RRHO14718 337 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 PRH1P02810 166 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 TRGC1P0CF51 173 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 HBG1P69891 147 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 HBG2P69892 147 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 C1orf194Q5T5A4 169 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 LHX4Q969G2 390 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 FLYWCH2Q96CP2 140 aaKnown RBP12.22□□□□□ -0.45
COL25A1-201ENST00000399126 PCGF1Q9BSM1 259 aa12.22□□□□□ -0.45
COL25A1-201ENST00000399126 HEYLQ9NQ87 328 aaPredicted RBP12.22□□□□□ -0.45
COL25A1-201ENST00000399126 KIR2DL5BA0A0G2JN68 375 aa12.21□□□□□ -0.45
COL25A1-201ENST00000399126 KIR2DL5BA0A0G2JPC4 375 aa12.21□□□□□ -0.45
COL25A1-201ENST00000399126 KIR2DL5AQ8N109 375 aa12.21□□□□□ -0.45
COL25A1-201ENST00000399126 CIB3Q96Q77 187 aaPredicted RBP12.21□□□□□ -0.45
COL25A1-201ENST00000399126 TPSG1Q9NRR2 321 aa12.21□□□□□ -0.45
COL25A1-201ENST00000399126 FOXA2Q9Y261 457 aaPredicted RBP12.21□□□□□ -0.45
COL25A1-201ENST00000399126 OR51B2Q9Y5P1 312 aa12.21□□□□□ -0.45
COL25A1-201ENST00000399126 UMAD1C9J7I0 102 aa12.21□□□□□ -0.46
COL25A1-201ENST00000399126 UPK2O00526 184 aa12.21□□□□□ -0.46
COL25A1-201ENST00000399126 TMEM177Q53S58 311 aa12.21□□□□□ -0.46
COL25A1-201ENST00000399126 COL5A1-AS1Q5SY13 56 aa12.21□□□□□ -0.46
COL25A1-201ENST00000399126 FAM71F2Q6NXP2 309 aa12.21□□□□□ -0.46
COL25A1-201ENST00000399126 OR52E5Q8NH55 327 aa12.21□□□□□ -0.46
COL25A1-201ENST00000399126 FAM213BQ8TBF2 198 aa12.21□□□□□ -0.46
COL25A1-201ENST00000399126 ELOVL1Q9BW60 279 aa12.21□□□□□ -0.46
COL25A1-201ENST00000399126 ENSAO43768 121 aaKnown RBP12.2□□□□□ -0.46
COL25A1-201ENST00000399126 IFNA5P01569 189 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 TRGC2P03986 189 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 IQCJQ1A5X6 159 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 TEX38Q6PEX7 206 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 ZNF705AQ6ZN79 300 aaPredicted RBP12.2□□□□□ -0.46
COL25A1-201ENST00000399126 TMEM183AQ8IXX5 376 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 OSR1Q8TAX0 266 aaPredicted RBP12.2□□□□□ -0.46
COL25A1-201ENST00000399126 CCL19Q99731 98 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 VSIRQ9H7M9 311 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 PARP11Q9NR21 331 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 WASHC3Q9Y3C0 194 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 ZANQ9Y493 2812 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 E7EUB6 86 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 IGLV2-23P01705 113 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 RBP4P02753 201 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 AMBPP02760 352 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 CNTFRP26992 372 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 HSPE1P61604 102 aaKnown RBP12.2□□□□□ -0.46
COL25A1-201ENST00000399126 PDLIM3Q53GG5 364 aaPredicted RBP12.2□□□□□ -0.46
COL25A1-201ENST00000399126 HCP5Q6MZN7 132 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 OR4C13Q8NGP0 309 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 CLDND2Q8NHS1 167 aa12.2□□□□□ -0.46
COL25A1-201ENST00000399126 CCL25O15444 150 aa12.19□□□□□ -0.46
COL25A1-201ENST00000399126 KBTBD11O94819 623 aa12.19□□□□□ -0.46
COL25A1-201ENST00000399126 C5orf64Q2M2E5 130 aa12.19□□□□□ -0.46
COL25A1-201ENST00000399126 C10orf55Q5SWW7 151 aa12.19□□□□□ -0.46
COL25A1-201ENST00000399126 SLC35E3Q7Z769 313 aa12.19□□□□□ -0.46
COL25A1-201ENST00000399126 PDPNQ86YL7 162 aa12.19□□□□□ -0.46
COL25A1-201ENST00000399126 WDR61Q9GZS3 305 aaKnown RBP12.19□□□□□ -0.46
COL25A1-201ENST00000399126 IGHV1-3A0A0C4DH29 117 aa12.19□□□□□ -0.46
COL25A1-201ENST00000399126 GUK1Q16774 197 aa12.19□□□□□ -0.46
COL25A1-201ENST00000399126 LRRC75BQ2VPJ9 315 aa12.19□□□□□ -0.46
COL25A1-201ENST00000399126 MOB3BQ86TA1 216 aa12.19□□□□□ -0.46
COL25A1-201ENST00000399126 OR10P1Q8NGE3 313 aa12.19□□□□□ -0.46
COL25A1-201ENST00000399126 OR10W1Q8NGF6 305 aa12.19□□□□□ -0.46
COL25A1-201ENST00000399126 BET1LQ9NYM9 111 aa12.19□□□□□ -0.46
COL25A1-201ENST00000399126 ABCA1O95477 2261 aa12.19□□□□□ -0.46
COL25A1-201ENST00000399126 TEX50A0A1B0GTY4 177 aa12.18□□□□□ -0.46
COL25A1-201ENST00000399126 IL3RAP26951 378 aa12.18□□□□□ -0.46
COL25A1-201ENST00000399126 LMO4P61968 165 aa12.18□□□□□ -0.46
COL25A1-201ENST00000399126 ERASQ7Z444 233 aa12.18□□□□□ -0.46
COL25A1-201ENST00000399126 Q8WTZ3 238 aa12.18□□□□□ -0.46
COL25A1-201ENST00000399126 FAM110AQ9BQ89 295 aa12.18□□□□□ -0.46
COL25A1-201ENST00000399126 CXCL1P09341 107 aa12.18□□□□□ -0.46
COL25A1-201ENST00000399126 ELOBQ15370 118 aa12.18□□□□□ -0.46
COL25A1-201ENST00000399126 SCGB1C1Q8TD33 95 aa12.18□□□□□ -0.46
COL25A1-201ENST00000399126 FRZBQ92765 325 aa12.18□□□□□ -0.46
COL25A1-201ENST00000399126 RPEQ96AT9 228 aa12.18□□□□□ -0.46
COL25A1-201ENST00000399126 GNPNAT1Q96EK6 184 aaPredicted RBP12.18□□□□□ -0.46
COL25A1-201ENST00000399126 HILPDAQ9Y5L2 63 aa12.18□□□□□ -0.46
COL25A1-201ENST00000399126 INSIG2Q9Y5U4 225 aa12.18□□□□□ -0.46
COL25A1-201ENST00000399126 LY6LH3BQJ8 138 aa12.17□□□□□ -0.46
COL25A1-201ENST00000399126 VMO1Q7Z5L0 202 aa12.17□□□□□ -0.46
COL25A1-201ENST00000399126 NHLRC2Q8NBF2 726 aa12.17□□□□□ -0.46
COL25A1-201ENST00000399126 ABHD5Q8WTS1 349 aa12.17□□□□□ -0.46
COL25A1-201ENST00000399126 ORAOV1Q8WV07 137 aa12.17□□□□□ -0.46
COL25A1-201ENST00000399126 TAF15Q92804 592 aaKnown RBP eCLIP12.17□□□□□ -0.46
COL25A1-201ENST00000399126 PRNDQ9UKY0 176 aa12.17□□□□□ -0.46
COL25A1-201ENST00000399126 PAX2Q02962 417 aa12.17□□□□□ -0.46
COL25A1-201ENST00000399126 MRGPRG-AS1Q2M3A8 158 aa12.17□□□□□ -0.46
COL25A1-201ENST00000399126 FBLN7Q53RD9 439 aa12.17□□□□□ -0.46
COL25A1-201ENST00000399126 OR1L6Q8NGR2 347 aa12.17□□□□□ -0.46
COL25A1-201ENST00000399126 LYPD6BQ8NI32 183 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms