RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 GTSCR1Q86UQ5 136 aa12.53□□□□□ -0.4
APTR-201ENST00000398043 CENPSQ8N2Z9 138 aa12.53□□□□□ -0.4
APTR-201ENST00000398043 DUSP18Q8NEJ0 188 aa12.53□□□□□ -0.4
APTR-201ENST00000398043 CACFD1Q9UGQ2 172 aa12.53□□□□□ -0.4
APTR-201ENST00000398043 HUWE1Q7Z6Z7 4374 aaKnown RBP12.53□□□□□ -0.4
APTR-201ENST00000398043 IGHV3OR16-8A0A075B7F1 116 aa12.52□□□□□ -0.41
APTR-201ENST00000398043 TRAV25A0A0B4J276 109 aa12.52□□□□□ -0.41
APTR-201ENST00000398043 A0A1B0GU03 582 aa12.52□□□□□ -0.41
APTR-201ENST00000398043 PLA2G10O15496 165 aa12.52□□□□□ -0.41
APTR-201ENST00000398043 GNG7O60262 68 aa12.52□□□□□ -0.41
APTR-201ENST00000398043 NXPH3O95157 252 aa12.52□□□□□ -0.41
APTR-201ENST00000398043 RELQ04864 619 aaPredicted RBP12.52□□□□□ -0.41
APTR-201ENST00000398043 NEURL2Q9BR09 285 aa12.52□□□□□ -0.41
APTR-201ENST00000398043 HEYLQ9NQ87 328 aaPredicted RBP12.52□□□□□ -0.41
APTR-201ENST00000398043 U3KQK5 164 aa12.52□□□□□ -0.41
APTR-201ENST00000398043 CEBPZOSA8MTT3 80 aa12.51□□□□□ -0.41
APTR-201ENST00000398043 SLC25A6P12236 298 aa12.51□□□□□ -0.41
APTR-201ENST00000398043 VAMP1P23763 118 aa12.51□□□□□ -0.41
APTR-201ENST00000398043 NPBWR1P48145 328 aa12.51□□□□□ -0.41
APTR-201ENST00000398043 CD81P60033 236 aa12.51□□□□□ -0.41
APTR-201ENST00000398043 UBE2MP61081 183 aaKnown RBP12.51□□□□□ -0.41
APTR-201ENST00000398043 LINC00299Q6ZSB3 139 aa12.51□□□□□ -0.41
APTR-201ENST00000398043 SLC24A4Q8NFF2 622 aa12.51□□□□□ -0.41
APTR-201ENST00000398043 OR4X1Q8NH49 305 aa12.51□□□□□ -0.41
APTR-201ENST00000398043 C7orf50Q9BRJ6 194 aaKnown RBP12.51□□□□□ -0.41
APTR-201ENST00000398043 TM2D3Q9BRN9 247 aa12.51□□□□□ -0.41
APTR-201ENST00000398043 C20orf24Q9BUV8 137 aa12.51□□□□□ -0.41
APTR-201ENST00000398043 ZFAND3Q9H8U3 227 aa12.51□□□□□ -0.41
APTR-201ENST00000398043 SMPXQ9UHP9 88 aa12.51□□□□□ -0.41
APTR-201ENST00000398043 FLVCR2Q9UPI3 526 aa12.51□□□□□ -0.41
APTR-201ENST00000398043 PIGBOS1A0A0B4J2F0 54 aa12.5□□□□□ -0.41
APTR-201ENST00000398043 C9orf170A2RU37 121 aa12.5□□□□□ -0.41
APTR-201ENST00000398043 ZNF207O43670 478 aaKnown RBP12.5□□□□□ -0.41
APTR-201ENST00000398043 CLN5O75503 358 aa12.5□□□□□ -0.41
APTR-201ENST00000398043 SCAF4O95104 1147 aaKnown RBP12.5□□□□□ -0.41
APTR-201ENST00000398043 OPRK1P41145 380 aa12.5□□□□□ -0.41
APTR-201ENST00000398043 INPP1P49441 399 aa12.5□□□□□ -0.41
APTR-201ENST00000398043 GUCA2BQ16661 112 aa12.5□□□□□ -0.41
APTR-201ENST00000398043 TOMM20LQ6UXN7 152 aa12.5□□□□□ -0.41
APTR-201ENST00000398043 RNASEH2CQ8TDP1 164 aaKnown RBP12.5□□□□□ -0.41
APTR-201ENST00000398043 WFDC10AQ9H1F0 79 aa12.5□□□□□ -0.41
APTR-201ENST00000398043 RBKSQ9H477 322 aa12.5□□□□□ -0.41
APTR-201ENST00000398043 NBEAL2Q6ZNJ1 2754 aa12.5□□□□□ -0.41
APTR-201ENST00000398043 IGHV7-4-1A0A0J9YVY3 117 aa12.49□□□□□ -0.41
APTR-201ENST00000398043 LINC00854A0A1B0GVQ3 168 aa12.49□□□□□ -0.41
APTR-201ENST00000398043 CHEK1O14757 476 aa12.49□□□□□ -0.41
APTR-201ENST00000398043 TSPAN4O14817 238 aa12.49□□□□□ -0.41
APTR-201ENST00000398043 IGKV1-17P01599 117 aa12.49□□□□□ -0.41
APTR-201ENST00000398043 HIPK2Q9H2X6 1198 aa12.49□□□□□ -0.41
APTR-201ENST00000398043 TMED3Q9Y3Q3 217 aa12.49□□□□□ -0.41
APTR-201ENST00000398043 RBMY1BA6NDE4 496 aaKnown RBP12.48□□□□□ -0.41
APTR-201ENST00000398043 RBMY1EA6NEQ0 496 aaKnown RBP12.48□□□□□ -0.41
APTR-201ENST00000398043 RBMY1DP0C7P1 496 aaKnown RBP12.48□□□□□ -0.41
APTR-201ENST00000398043 NPY1RP25929 384 aa12.48□□□□□ -0.41
APTR-201ENST00000398043 HAGHQ16775 308 aa12.48□□□□□ -0.41
APTR-201ENST00000398043 CNPY1Q3B7I2 92 aa12.48□□□□□ -0.41
APTR-201ENST00000398043 FAM90A2PQ658T7 463 aa12.48□□□□□ -0.41
APTR-201ENST00000398043 PRSS54Q6PEW0 395 aa12.48□□□□□ -0.41
APTR-201ENST00000398043 ZNF600Q6ZNG1 722 aa12.48□□□□□ -0.41
APTR-201ENST00000398043 DEFB125Q8N687 156 aa12.48□□□□□ -0.41
APTR-201ENST00000398043 TMEM116Q8NCL8 245 aa12.48□□□□□ -0.41
APTR-201ENST00000398043 DTD1Q8TEA8 209 aa12.48□□□□□ -0.41
APTR-201ENST00000398043 WWC2-AS2Q96NR7 200 aa12.48□□□□□ -0.41
APTR-201ENST00000398043 SPAG8Q99932 426 aaPredicted RBP12.48□□□□□ -0.41
APTR-201ENST00000398043 U3KQ87 197 aa12.48□□□□□ -0.41
APTR-201ENST00000398043 OR11H12B2RN74 326 aa12.47□□□□□ -0.41
APTR-201ENST00000398043 IGLC1P0CG04 106 aa12.47□□□□□ -0.41
APTR-201ENST00000398043 DHRS2Q13268 280 aa12.47□□□□□ -0.41
APTR-201ENST00000398043 OR1S1Q8NH92 325 aa12.47□□□□□ -0.41
APTR-201ENST00000398043 RNF2Q99496 336 aa12.47□□□□□ -0.41
APTR-201ENST00000398043 RHPN1-AS1Q9BWJ2 59 aa12.47□□□□□ -0.41
APTR-201ENST00000398043 PUS1Q9Y606 427 aaKnown RBP eCLIP12.47□□□□□ -0.41
APTR-201ENST00000398043 TRAV14DV4A0A0A6YYC5 116 aa12.46□□□□□ -0.41
APTR-201ENST00000398043 RPS10-NUDT3A0A1W2PQS6 291 aa12.46□□□□□ -0.41
APTR-201ENST00000398043 CENPXA8MT69 81 aa12.46□□□□□ -0.41
APTR-201ENST00000398043 FAM90A26D6RGX4 464 aa12.46□□□□□ -0.41
APTR-201ENST00000398043 YIF1AO95070 293 aa12.46□□□□□ -0.41
APTR-201ENST00000398043 OR4E1P0C645 316 aa12.46□□□□□ -0.41
APTR-201ENST00000398043 SLC25A4P12235 298 aa12.46□□□□□ -0.41
APTR-201ENST00000398043 GGNBP1Q5YKI7 109 aa12.46□□□□□ -0.41
APTR-201ENST00000398043 RBPMS2Q6ZRY4 209 aaKnown RBP12.46□□□□□ -0.41
APTR-201ENST00000398043 LYG2Q86SG7 212 aa12.46□□□□□ -0.41
APTR-201ENST00000398043 OR52B4Q8NGK2 314 aa12.46□□□□□ -0.41
APTR-201ENST00000398043 RCHY1Q96PM5 261 aa12.46□□□□□ -0.41
APTR-201ENST00000398043 CITED4Q96RK1 184 aa12.46□□□□□ -0.41
APTR-201ENST00000398043 CCDC32Q9BV29 185 aa12.46□□□□□ -0.41
APTR-201ENST00000398043 VSIRQ9H7M9 311 aa12.46□□□□□ -0.41
APTR-201ENST00000398043 TUBA4BQ9H853 241 aa12.46□□□□□ -0.41
APTR-201ENST00000398043 TRAV30A0A087WSZ9 112 aa12.45□□□□□ -0.42
APTR-201ENST00000398043 LYRM1O43325 122 aa12.45□□□□□ -0.42
APTR-201ENST00000398043 APOHP02749 345 aaPredicted RBP12.45□□□□□ -0.42
APTR-201ENST00000398043 HOXB5P09067 269 aa12.45□□□□□ -0.42
APTR-201ENST00000398043 ANXA7P20073 488 aaKnown RBP12.45□□□□□ -0.42
APTR-201ENST00000398043 RND2P52198 227 aa12.45□□□□□ -0.42
APTR-201ENST00000398043 ATP5IP56385 69 aaPredicted RBP12.45□□□□□ -0.42
APTR-201ENST00000398043 TIGITQ495A1 244 aa12.45□□□□□ -0.42
APTR-201ENST00000398043 SLC16A13Q7RTY0 426 aa12.45□□□□□ -0.42
APTR-201ENST00000398043 NOXA1Q86UR1 476 aa12.45□□□□□ -0.42
APTR-201ENST00000398043 LILRB2Q8N423 598 aa12.45□□□□□ -0.42
APTR-201ENST00000398043 SRD5A3Q9H8P0 318 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms